Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002449g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.2e-204 714.1 360 100.0
Nitab4.5_0001021g0150 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.7e-123 446.0 385 65.5
Nitab4.5_0003657g0010 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.4e-103 380.6 573 46.6
Nitab4.5_0012491g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.1e-103 379.4 279 69.2
Nitab4.5_0002906g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.5e-97 359.8 261 73.9
Nitab4.5_0001246g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.6e-91 339.0 261 68.6
Nitab4.5_0002309g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 4.2e-76 289.3 372 48.7
Nitab4.5_0000307g0220 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.1e-74 282.3 179 79.9
Nitab4.5_0002714g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.7e-69 267.3 227 67.8
Nitab4.5_0002352g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.1e-63 248.1 263 57.8
Nitab4.5_0004219g0020 Nicotiana tabacum HOM05D000045 ORTHO05D002701 5.8e-62 242.3 264 52.3
Nitab4.5_0008760g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.8e-62 242.3 223 59.6
Nitab4.5_0004578g0040 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.7e-61 240.7 341 45.5
Nitab4.5_0011485g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.9e-60 237.3 389 45.8
Nitab4.5_0000987g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.7e-58 228.4 192 68.8
Nitab4.5_0001969g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.6e-54 216.9 201 59.7
Nitab4.5_0001168g0180 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.1e-51 207.2 199 57.8
Nitab4.5_0001727g0180 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-50 204.5 166 62.7
Nitab4.5_0007742g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.1e-49 201.4 231 52.8
Nitab4.5_0006220g0020 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.5e-49 201.1 374 39.3
Nitab4.5_0000691g0160 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.4e-47 194.5 212 51.9
Nitab4.5_0000260g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.3e-47 192.6 223 53.8
Nitab4.5_0004837g0080 Nicotiana tabacum HOM05D000045 ORTHO05D002701 6.9e-47 192.2 270 48.5
Nitab4.5_0002211g0160 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.6e-43 181.0 211 56.9
Nitab4.5_0000108g0420 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.7e-42 175.3 194 57.7
Nitab4.5_0000216g0250 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.5e-37 159.1 117 76.1
Nitab4.5_0009727g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.5e-36 157.1 228 46.9
Nitab4.5_0005746g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.5e-33 147.9 184 43.5
Nitab4.5_0005287g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.2e-32 144.1 255 40.4
Nitab4.5_0000095g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.1e-31 140.2 192 41.1
Nitab4.5_0008768g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.4e-30 136.7 90 83.3
Nitab4.5_0003881g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.9e-29 133.7 264 36.4
Nitab4.5_0000843g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.8e-29 133.3 310 30.6
Nitab4.5_0002782g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.2e-28 129.0 183 41.0
Nitab4.5_0000216g0280 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.3e-26 124.0 98 65.3
Nitab4.5_0003364g0050 Nicotiana tabacum HOM05D019089 ORTHO05D022966 3.9e-26 123.2 73 89.0
Nitab4.5_0008386g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.7e-26 122.5 212 36.8
Nitab4.5_0001432g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-24 118.2 131 45.8
Nitab4.5_0004443g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.7e-24 116.7 132 45.5
Nitab4.5_0000092g0150 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.8e-24 116.3 131 45.8
Nitab4.5_0000707g0210 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.4e-23 114.0 187 38.5
Nitab4.5_0002791g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.4e-23 114.0 133 43.6
Nitab4.5_0002302g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.6e-22 111.3 109 56.9
Nitab4.5_0002352g0040 Nicotiana tabacum HOM05D019089 ORTHO05D286748 3.5e-22 110.2 69 85.5
Nitab4.5_0003552g0040 Nicotiana tabacum HOM05D000045 ORTHO05D002701 3.5e-22 110.2 72 73.6
Nitab4.5_0002333g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.5e-22 109.8 99 62.6
Nitab4.5_0000540g0130 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.9e-21 107.1 122 45.9
Nitab4.5_0000043g0140 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.9e-20 104.4 111 52.3
Nitab4.5_0003881g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.9e-20 104.4 111 60.4
CAN.G739.5 Capsicum annuum HOM05D004033 ORTHO05D002701 1.6e-19 101.3 226 31.0
Nitab4.5_0001919g0150 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.4e-18 98.2 80 71.2
Nitab4.5_0001861g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.0e-18 96.7 130 40.0
Nitab4.5_0003351g0130 Nicotiana tabacum HOM05D000045 ORTHO05D002701 4.0e-18 96.7 57 78.9
CAN.G160.46 Capsicum annuum HOM05D004033 ORTHO05D002701 6.7e-18 95.9 166 34.9
Nitab4.5_0001969g0110 Nicotiana tabacum HOM05D019089 ORTHO05D022966 1.5e-17 94.7 73 71.2
Nitab4.5_0003167g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.5e-17 94.7 54 83.3
Nitab4.5_0004232g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.5e-17 94.7 47 91.5
Nitab4.5_0001031g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.0e-17 94.4 271 28.0
Nitab4.5_0001781g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.5e-17 92.4 146 37.7
Nitab4.5_0006902g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.7e-17 92.0 108 44.4
Nitab4.5_0001246g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.3e-16 91.7 51 80.4
Nitab4.5_0001569g0190 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.4e-15 88.2 59 71.2
CAN.G908.1 Capsicum annuum HOM05D004033 ORTHO05D002701 1.8e-15 87.8 222 31.5
Nitab4.5_0004232g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.1e-15 87.0 42 92.9
Nitab4.5_0009727g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 5.3e-15 86.3 59 71.2
Nitab4.5_0002302g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-13 81.6 62 64.5
Nitab4.5_0000260g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.2e-13 80.9 59 72.9
Nitab4.5_0000025g0250 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.9e-13 80.5 73 49.3
CAN.G1662.1 Capsicum annuum HOM05D004033 ORTHO05D002701 5.0e-13 79.7 188 29.8
Nitab4.5_0002386g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.0e-13 79.7 106 42.5
Nitab4.5_0012426g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 5.0e-13 79.7 219 30.1
Nitab4.5_0004465g0090 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.5e-13 79.0 108 38.9
Nitab4.5_0000216g0220 Nicotiana tabacum HOM05D010896 ORTHO05D011162 1.5e-12 78.2 41 87.8
Nitab4.5_0000669g0150 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.5e-12 78.2 59 57.6
Nitab4.5_0001488g0170 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.5e-12 77.4 177 33.3
Nitab4.5_0002211g0170 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.2e-12 77.0 35 100.0
Nitab4.5_0011951g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.2e-12 76.6 155 32.3
Nitab4.5_0015349g0020 Nicotiana tabacum HOM05D010896 ORTHO05D011162 1.6e-11 74.7 41 85.4
Nitab4.5_0003463g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.1e-11 74.3 149 32.9
Nitab4.5_0000440g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.7e-11 73.2 59 62.7
Nitab4.5_0004837g0030 Nicotiana tabacum HOM05D010896 ORTHO05D011162 4.7e-11 73.2 44 81.8
Nitab4.5_0001106g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.0e-11 72.4 62 50.0
Nitab4.5_0001969g0040 Nicotiana tabacum HOM05D010896 ORTHO05D282883 1.8e-10 71.2 46 76.1
Nitab4.5_0004096g0030 Nicotiana tabacum HOM05D010896 ORTHO05D001012 1.8e-10 71.2 43 81.4
CAN.G168.15 Capsicum annuum HOM05D004033 ORTHO05D002701 4.0e-10 70.1 212 29.2
CAN.G2043.1 Capsicum annuum HOM05D000045 ORTHO05D002701 5.2e-10 69.7 59 50.8
CAN.G2880.1 Capsicum annuum HOM05D000045 ORTHO05D002701 5.2e-10 69.7 59 50.8
Nitab4.5_0019737g0010 Nicotiana tabacum HOM05D010896 ORTHO05D286136 8.8e-10 68.9 41 75.6
CAN.G320.1 Capsicum annuum HOM05D004033 ORTHO05D002701 3.4e-09 67.0 66 48.5
Nitab4.5_0002937g0010 Nicotiana tabacum HOM05D010896 ORTHO05D011162 3.4e-09 67.0 44 77.3
Nitab4.5_0002782g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.4e-09 66.6 57 54.4
Nitab4.5_0003611g0120 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.5e-09 65.9 49 61.2
Nitab4.5_0001727g0200 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.2e-08 64.3 59 62.7
Nitab4.5_0002128g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.8e-08 63.9 57 70.2
Nitab4.5_0005934g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.8e-08 63.9 142 31.0
Migut.M00234 Erythranthe guttata HOM05D000045 ORTHO05D000067 3.7e-08 63.5 57 47.4
Nitab4.5_0000082g0390 Nicotiana tabacum HOM05D000045 ORTHO05D002701 3.7e-08 63.5 68 44.1
Nitab4.5_0001915g0020 Nicotiana tabacum HOM05D010896 ORTHO05D282728 3.7e-08 63.5 44 72.7
Manes.09G081652 Manihot esculenta HOM05D000045 ORTHO05D000067 6.3e-08 62.8 56 46.4
Nitab4.5_0000440g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.3e-08 62.4 43 67.4
Nitab4.5_0000188g0290 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.8e-07 61.2 70 40.0
Nitab4.5_0003364g0040 Nicotiana tabacum HOM05D010896 ORTHO05D283304 1.8e-07 61.2 34 85.3
Nitab4.5_0007949g0010 Nicotiana tabacum HOM05D010896 ORTHO05D011162 2.4e-07 60.8 37 81.1
Nitab4.5_0002333g0010 Nicotiana tabacum HOM05D010896 ORTHO05D011162 3.1e-07 60.5 44 68.2
Nitab4.5_0013768g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.4e-07 59.7 75 46.7
Nitab4.5_0005799g0040 Nicotiana tabacum HOM05D010896 ORTHO05D011162 9.1e-07 58.9 44 63.6
Nitab4.5_0006745g0070 Nicotiana tabacum HOM05D000045 ORTHO05D002701 9.1e-07 58.9 116 32.8
Nitab4.5_0003145g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.0e-06 57.8 44 59.1
Nitab4.5_0001310g0130 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.7e-06 57.4 40 60.0
Peaxi162Scf00008g02315 Petunia axillaris HOM05D000045 ORTHO05D000067 2.7e-06 57.4 59 45.8
PGSC0003DMG400045670 Solanum tuberosum HOM05D004033 ORTHO05D002701 2.7e-06 57.4 104 36.5
Nitab4.5_0006917g0020 Nicotiana tabacum HOM05D010896 ORTHO05D011162 3.5e-06 57.0 43 67.4
Nitab4.5_0000060g0020 Nicotiana tabacum HOM05D000045 ORTHO05D002701 4.5e-06 56.6 53 47.2
Aqoxy7G02166 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 7.7e-06 55.8 58 43.1
Nitab4.5_0000025g0270 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.7e-06 55.8 39 61.5


User provided reference genes

Program Settings