Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002446g0070 Nicotiana tabacum HOM05D000388 ORTHO05D009843 9.6e-33 142.9 72 100.0
Nitab4.5_0002607g0050 Nicotiana tabacum HOM05D000388 ORTHO05D009843 3.5e-19 97.8 92 63.0
Nitab4.5_0025922g0010 Nicotiana tabacum HOM05D000388 ORTHO05D009843 5.5e-12 73.9 42 95.2
Solyc00g500055.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 5.5e-12 73.9 42 95.2
Solyc00g500137.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 5.5e-12 73.9 42 95.2
Solyc00g500207.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 5.5e-12 73.9 42 95.2
Hund29903 Selenicereus undatus HOM05D000388 ORTHO05D009843 9.4e-12 73.2 73 60.3
Nitab4.5_0007186g0040 Nicotiana tabacum HOM05D000388 ORTHO05D009843 2.1e-11 72.0 42 92.9
HanXRQChr16g0506261 Helianthus annuus HOM05D000388 ORTHO05D009843 2.5e-09 65.1 42 83.3
TAR629G1277 Trochodendron aralioides HOM05D000388 ORTHO05D009843 7.4e-09 63.5 42 83.3
EL10As15g24141 Beta vulgaris HOM05D000388 ORTHO05D009843 2.2e-08 62.0 89 47.2
Peaxi162Scf00455g00046 Petunia axillaris HOM05D000388 ORTHO05D009843 3.7e-08 61.2 37 89.2
Gohir.A05G086166 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.2e-06 56.2 33 87.9
CAN.G142.10 Capsicum annuum HOM05D000388 ORTHO05D009843 1.5e-06 55.8 33 90.9
CAN.G500.81 Capsicum annuum HOM05D000388 ORTHO05D009843 1.5e-06 55.8 33 90.9
CAN.G653.5 Capsicum annuum HOM05D000388 ORTHO05D009843 1.5e-06 55.8 33 90.9
A06p23300 Brassica napus HOM05D000388 ORTHO05D000473 2.0e-06 55.5 41 75.6
BNapus_Darmor_BZH_scaffold_287p00030 Brassica napus HOM05D000388 ORTHO05D000473 2.0e-06 55.5 41 75.6
C09p40130 Brassica napus HOM05D000388 ORTHO05D009843 2.0e-06 55.5 41 75.6
BolC7t41727H Brassica oleracea HOM05D000388 ORTHO05D000473 2.0e-06 55.5 41 75.6
BolSC29t60455H Brassica oleracea HOM05D000388 ORTHO05D000473 2.0e-06 55.5 41 75.6
BolSC45t60943H Brassica oleracea HOM05D000388 ORTHO05D000473 2.0e-06 55.5 41 75.6
BolSC46t60990H Brassica oleracea HOM05D000388 ORTHO05D000473 2.0e-06 55.5 41 75.6
BraSC140t45581Z Brassica rapa HOM05D000388 ORTHO05D000473 2.0e-06 55.5 41 75.6
BraSC179t45796Z Brassica rapa HOM05D000388 ORTHO05D000473 2.0e-06 55.5 41 75.6
Migut.D01348 Erythranthe guttata HOM05D000388 ORTHO05D009843 3.4e-06 54.7 33 90.9
Migut.J01359 Erythranthe guttata HOM05D000388 ORTHO05D009843 3.4e-06 54.7 33 90.9
LjContig00318g0006350 Lotus japonicus HOM05D000388 ORTHO05D009843 3.4e-06 54.7 33 90.9
Lalb_Chr23g0270511 Lupinus albus HOM05D000388 ORTHO05D009843 3.4e-06 54.7 33 90.9
Potri.013G142336 Populus trichocarpa HOM05D000388 ORTHO05D009843 3.4e-06 54.7 33 90.9
RcHm_v2.0_Chr3g0491801 Rosa chinensis HOM05D000388 ORTHO05D009843 5.9e-06 53.9 58 58.6
Gohir.A03G019500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 7.7e-06 53.5 53 60.4
Hma1.2p1_0051F.1_g029490 Hydrangea macrophylla HOM05D000388 ORTHO05D009843 7.7e-06 53.5 33 87.9
Nn020s41509 Nelumbo nucifera HOM05D000388 ORTHO05D009843 7.7e-06 53.5 33 87.9
Nn055s41931 Nelumbo nucifera HOM05D000388 ORTHO05D009843 7.7e-06 53.5 33 87.9
Nn082s42681 Nelumbo nucifera HOM05D000388 ORTHO05D009843 7.7e-06 53.5 33 87.9
Nn287s46145 Nelumbo nucifera HOM05D000388 ORTHO05D009843 7.7e-06 53.5 33 87.9


User provided reference genes

Program Settings