Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002446g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.7e-13 79.0 70 100.0
Nitab4.5_0016174g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.6e-08 62.4 66 83.3
Nitab4.5_0001946g0030 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.1e-08 62.0 31 93.5
Nitab4.5_0018109g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.1e-08 62.0 31 93.5
Nitab4.5_0023562g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.1e-08 62.0 31 93.5
Peaxi162Scf00000g07210 Petunia axillaris HOM05D000445 ORTHO05D000314 2.1e-08 62.0 31 93.5
Peaxi162Scf00913g00110 Petunia axillaris HOM05D000445 ORTHO05D000314 2.1e-08 62.0 31 93.5
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 2.1e-08 62.0 31 93.5
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 2.1e-08 62.0 31 93.5
Solyc01g017140.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.1e-08 62.0 31 93.5
Nitab4.5_0000303g0110 Nicotiana tabacum HOM05D000445 ORTHO05D010933 2.7e-08 61.6 66 90.9
Nitab4.5_0007979g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.7e-08 61.6 66 89.4
CAN.G129.16 Capsicum annuum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
CAN.G1298.14 Capsicum annuum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
CAN.G1298.21 Capsicum annuum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
CAN.G134.4 Capsicum annuum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
CAN.G1648.15 Capsicum annuum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 84.8
CAN.G201.48 Capsicum annuum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
CAN.G219.12 Capsicum annuum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
CAN.G838.7 Capsicum annuum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
CAN.G939.8 Capsicum annuum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
Nitab4.5_0001379g0040 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 31 90.3
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
Solyc09g061465.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
Sopen02g009120 Solanum pennellii HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
Sopen10g008920 Solanum pennellii HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
PGSC0003DMG400020691 Solanum tuberosum HOM05D000445 ORTHO05D000314 4.7e-08 60.8 66 87.9
CAN.G8.28 Capsicum annuum HOM05D000445 ORTHO05D000314 6.1e-08 60.5 31 90.3
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 1.0e-07 59.7 31 90.3
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 1.0e-07 59.7 31 90.3
Oeu011265.1 Olea europaea HOM05D000445 ORTHO05D000314 1.0e-07 59.7 31 90.3
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 1.4e-07 59.3 31 87.1
CAN.G1045.6 Capsicum annuum HOM05D000445 ORTHO05D000314 1.8e-07 58.9 31 87.1
CAN.G1739.3 Capsicum annuum HOM05D000445 ORTHO05D000314 1.8e-07 58.9 31 87.1
Nitab4.5_0002093g0200 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.8e-07 58.9 31 90.3
Nitab4.5_0004783g0040 Nicotiana tabacum HOM05D000841 ORTHO05D001553 2.3e-07 58.5 66 89.4
Nitab4.5_0016174g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.3e-07 58.5 31 87.1
unitig_91.g26489 Utricularia gibba HOM05D000445 ORTHO05D000314 2.3e-07 58.5 31 90.3
unitig_91.g26516 Utricularia gibba HOM05D000445 ORTHO05D000314 2.3e-07 58.5 31 90.3
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 2.3e-07 58.5 31 90.3
CAN.G1397.8 Capsicum annuum HOM05D000445 ORTHO05D000314 4.0e-07 57.8 66 68.2
Nitab4.5_0000011g0350 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.0e-07 57.8 31 83.9
Nitab4.5_0000223g0180 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.0e-07 57.8 66 81.8
arahy.Tifrunner.gnm1.ann1.X5PJ61 Arachis hypogaea HOM05D000445 ORTHO05D000314 5.2e-07 57.4 31 87.1
arahy.Tifrunner.gnm1.ann1.89W5R7 Arachis hypogaea HOM05D000445 ORTHO05D000314 6.7e-07 57.0 31 83.9
CAN.G1045.5 Capsicum annuum HOM05D000445 ORTHO05D000314 6.7e-07 57.0 66 90.9
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 6.7e-07 57.0 31 87.1
Nitab4.5_0003101g0080 Nicotiana tabacum HOM05D000445 ORTHO05D000314 6.7e-07 57.0 31 87.1
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 6.7e-07 57.0 29 93.1
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 6.7e-07 57.0 29 93.1
Solyc04g050840.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.7e-07 57.0 67 61.2
BraSC103t45491Z Brassica rapa HOM05D000445 ORTHO05D000314 8.8e-07 56.6 31 87.1
BraSC59t46563Z Brassica rapa HOM05D000445 ORTHO05D000314 8.8e-07 56.6 31 87.1
Lalb_Chr01g0014981 Lupinus albus HOM05D000445 ORTHO05D000314 1.5e-06 55.8 31 83.9
Lalb_Chr07g0191931 Lupinus albus HOM05D000445 ORTHO05D000314 1.5e-06 55.8 31 83.9
Lalb_Chr12g0207001 Lupinus albus HOM05D000445 ORTHO05D000314 1.5e-06 55.8 31 83.9
Phvul.003G094800 Phaseolus vulgaris HOM05D000445 ORTHO05D000314 2.0e-06 55.5 31 83.9
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 2.0e-06 55.5 28 92.9
Sc02g0005240 Simmondsia chinensis HOM05D000445 ORTHO05D000314 2.0e-06 55.5 31 83.9
Solyc00g500147.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.0e-06 55.5 66 84.8
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 2.0e-06 55.5 31 83.9
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 2.0e-06 55.5 31 83.9
Atru.chr8.681 Acer truncatum HOM05D000445 ORTHO05D000314 2.6e-06 55.1 31 83.9
CAN.G30.10 Capsicum annuum HOM05D000445 ORTHO05D000314 2.6e-06 55.1 31 83.9
PGSC0003DMG400015063 Solanum tuberosum HOM05D000445 ORTHO05D000314 2.6e-06 55.1 31 83.9
EL10Ac8g19246 Beta vulgaris HOM05D000445 ORTHO05D000314 3.3e-06 54.7 31 83.9
EL10As9g23919 Beta vulgaris HOM05D000445 ORTHO05D000314 3.3e-06 54.7 31 83.9
Solyc04g024580.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.3e-06 54.7 66 78.8
Phvul.009G090300 Phaseolus vulgaris HOM05D000445 ORTHO05D000314 4.4e-06 54.3 31 80.6
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 7.5e-06 53.5 27 92.6
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 7.5e-06 53.5 27 92.6
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 7.5e-06 53.5 27 92.6
Cfa015164 Carpinus fangiana HOM05D000445 ORTHO05D000314 7.5e-06 53.5 27 92.6
ClCG02G009750 Citrullus lanatus HOM05D000445 ORTHO05D000314 7.5e-06 53.5 27 92.6
Migut.N02065 Erythranthe guttata HOM05D000445 ORTHO05D000314 7.5e-06 53.5 27 92.6
RcHm_v2.0_Chr2g0118441 Rosa chinensis HOM05D000445 ORTHO05D000314 7.5e-06 53.5 31 83.9
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 7.5e-06 53.5 27 92.6
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 7.5e-06 53.5 27 92.6
CAN.G262.9 Capsicum annuum HOM05D000445 ORTHO05D000314 9.7e-06 53.1 31 77.4
Lalb_Chr12g0206611 Lupinus albus HOM05D000445 ORTHO05D000314 9.7e-06 53.1 31 80.6


User provided reference genes

Program Settings