Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 7.0e-196 687.2 369 100.0
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 3.0e-170 602.1 419 81.1
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 7.3e-161 570.9 495 68.9
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 9.9e-142 507.3 452 65.7
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 1.9e-140 503.1 452 65.3
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 1.0e-138 497.3 454 64.5
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 8.2e-136 487.6 506 58.5
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 1.7e-133 479.9 488 59.0
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 2.3e-130 469.5 487 58.9
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 1.4e-127 460.3 539 53.8
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 2.4e-127 459.5 502 56.6
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 2.9e-125 452.6 490 56.9
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 6.1e-123 444.9 502 55.8
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 2.3e-122 443.0 513 54.2
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 9.7e-121 437.6 489 55.2
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 6.3e-120 434.9 491 54.8
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 1.5e-118 430.3 497 55.3
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 5.9e-118 428.3 487 55.0
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 1.0e-117 427.6 522 52.5
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 1.3e-117 427.2 505 54.1
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 8.5e-117 424.5 503 53.7
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 3.2e-116 422.5 493 54.2
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 1.2e-115 420.6 497 54.3
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 3.6e-115 419.1 485 54.6
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 3.9e-114 415.6 501 53.1
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 3.3e-113 412.5 514 52.7
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 3.3e-113 412.5 506 52.2
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 2.2e-112 409.8 489 53.4
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 8.2e-112 407.9 497 53.5
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 7.0e-111 404.8 503 53.5
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 1.2e-110 404.1 502 53.4
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 2.6e-110 402.9 489 52.4
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 3.5e-110 402.5 506 52.8
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 5.9e-110 401.7 513 52.4
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 2.2e-109 399.8 477 53.2
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 5.0e-109 398.7 500 52.8
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 1.1e-108 397.5 478 53.8
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 2.5e-108 396.4 488 54.3
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 5.5e-108 395.2 487 52.6
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 1.6e-107 393.7 502 50.8
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 1.6e-107 393.7 488 51.6
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 2.1e-107 393.3 493 51.5
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 4.7e-107 392.1 491 51.3
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 1.0e-106 391.0 488 53.1
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.4e-106 390.6 502 51.0
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 1.8e-106 390.2 518 50.4
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 3.9e-106 389.0 488 51.0
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 5.2e-106 388.7 496 52.4
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 1.5e-105 387.1 503 51.3
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 2.6e-105 386.3 454 52.9
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 4.4e-105 385.6 488 52.9
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 4.4e-105 385.6 488 52.9
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 4.4e-105 385.6 487 52.4
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 1.3e-104 384.0 488 52.9
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 2.2e-104 383.3 507 50.3
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.8e-103 380.2 483 50.7
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 7.0e-103 378.3 501 50.7
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 9.1e-103 377.9 479 53.4
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 3.5e-102 375.9 491 49.9
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 5.9e-102 375.2 484 51.2
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 5.0e-101 372.1 501 49.9
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 2.5e-100 369.8 518 49.0
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 9.4e-100 367.9 452 51.8
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 1.2e-99 367.5 452 51.8
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 2.1e-99 366.7 502 49.2
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 3.6e-99 365.9 487 50.5
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 8.0e-99 364.8 505 47.3
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 6.8e-98 361.7 487 49.7
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 1.5e-97 360.5 523 47.0
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 2.0e-97 360.1 508 48.8
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 1.3e-96 357.5 503 49.1
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 1.3e-96 357.5 451 52.1
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 2.2e-96 356.7 447 51.0
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 2.2e-96 356.7 455 49.2
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 6.3e-96 355.1 501 49.5
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 4.1e-95 352.4 481 49.7
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.1e-92 344.4 482 49.0
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 4.7e-91 339.0 502 47.6
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 2.6e-89 333.2 462 48.7
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 4.4e-89 332.4 464 47.2
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 6.3e-88 328.6 448 49.6
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 1.3e-85 320.9 488 44.9
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 1.2e-81 307.8 451 45.2
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 1.3e-80 304.3 378 48.9
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 9.2e-79 298.1 377 49.1
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 3.6e-75 286.2 378 48.4
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 5.2e-74 282.3 394 48.7
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.4e-71 274.2 388 46.1
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 3.2e-71 273.1 391 45.8
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 1.3e-69 267.7 212 74.1
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 1.3e-69 267.7 516 40.7
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 3.0e-69 266.5 377 45.1
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 1.5e-65 254.2 467 39.8
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 6.6e-61 238.8 213 69.0
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 3.6e-59 233.0 269 56.9
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 1.1e-58 231.5 364 44.0
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 8.9e-58 228.4 130 84.6
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 4.4e-57 226.1 156 73.7
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 1.7e-56 224.2 130 83.1
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 2.2e-56 223.8 212 65.6
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 6.4e-56 222.2 222 64.4
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 5.4e-55 219.2 132 82.6
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 4.7e-51 206.1 386 41.7
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 1.8e-50 204.1 149 71.1
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 4.4e-49 199.5 527 35.1
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 9.9e-49 198.4 303 48.5
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 1.4e-47 194.5 281 50.2
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 7.1e-47 192.2 527 34.5
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 2.7e-46 190.3 161 70.2
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 1.1e-44 184.9 199 59.3
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 2.6e-41 173.7 420 36.7
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 2.2e-40 170.6 239 50.6
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 9.3e-39 165.2 341 38.4
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 4.6e-38 162.9 84 90.5
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 3.0e-37 160.2 161 60.2
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 3.9e-37 159.8 237 51.1
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 3.9e-37 159.8 182 57.1
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 1.5e-36 157.9 149 61.1
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 6.9e-34 149.1 129 75.2
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.6e-30 137.9 277 37.5
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 1.5e-28 131.3 126 69.0
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 4.3e-28 129.8 120 67.5
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.1e-26 123.6 186 51.1
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 4.5e-25 119.8 466 31.3
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.4e-23 114.8 72 76.4
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 1.2e-22 111.7 66 81.8
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 4.6e-22 109.8 66 80.3
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.8e-19 100.5 78 74.4
TAR381G1012 Trochodendron aralioides HOM05D005490 ORTHO05D006606 1.1e-18 98.6 94 74.5
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.4e-18 98.2 64 78.1
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 3.8e-16 90.1 257 32.3
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 8.7e-13 79.0 50 76.0
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 3.3e-12 77.0 50 76.0
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 1.6e-11 74.7 51 74.5
Cre12.g498350 Chlamydomonas reinhardtii HOM05D005490 ORTHO05D006606 5.5e-07 59.7 143 30.8
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 6.1e-06 56.2 90 35.6


User provided reference genes

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