Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 8.2e-97 357.1 181 100.0
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 2.6e-95 352.1 181 98.3
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 1.8e-91 339.3 181 94.5
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 3.9e-91 338.2 181 92.8
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 9.7e-90 333.6 181 91.2
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 2.8e-89 332.0 181 90.6
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 9.1e-72 273.9 181 76.2
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.7e-70 269.6 182 75.8
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 5.0e-70 268.1 182 75.8
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 6.5e-70 267.7 181 74.6
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 6.5e-70 267.7 183 77.6
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 1.4e-69 266.5 182 75.3
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 4.2e-69 265.0 183 75.4
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.2e-68 263.5 180 73.3
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 2.7e-68 262.3 180 72.8
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 6.1e-68 261.2 183 75.4
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 6.1e-68 261.2 182 74.2
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 2.3e-67 259.2 182 73.6
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 3.0e-67 258.8 181 71.8
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 1.1e-66 256.9 181 71.8
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 4.4e-66 255.0 158 79.1
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 7.4e-66 254.2 184 72.3
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 1.7e-65 253.1 181 72.4
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.7e-65 253.1 182 72.5
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 1.7e-65 253.1 180 74.4
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 2.2e-65 252.7 181 73.5
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 2.2e-65 252.7 181 72.4
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 2.2e-65 252.7 182 72.0
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 2.8e-65 252.3 181 72.4
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 2.8e-65 252.3 181 71.8
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 4.8e-65 251.5 182 72.0
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 4.8e-65 251.5 181 71.3
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 8.2e-65 250.8 187 70.6
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 8.2e-65 250.8 181 70.7
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 1.8e-64 249.6 184 72.3
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 1.8e-64 249.6 183 72.1
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 1.8e-64 249.6 182 69.8
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 1.8e-64 249.6 182 72.5
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 2.4e-64 249.2 182 72.0
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 2.4e-64 249.2 182 71.4
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 2.4e-64 249.2 182 71.4
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 3.1e-64 248.8 181 69.6
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 4.1e-64 248.4 182 70.9
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 4.1e-64 248.4 186 72.0
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 7.0e-64 247.7 182 69.8
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 7.0e-64 247.7 181 71.3
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 7.0e-64 247.7 183 70.5
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 7.0e-64 247.7 182 70.9
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 9.1e-64 247.3 183 71.0
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 2.0e-63 246.1 145 82.8
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 3.5e-63 245.4 183 69.4
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 4.5e-63 245.0 181 70.2
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 4.5e-63 245.0 182 71.4
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 5.9e-63 244.6 181 71.8
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 2.9e-62 242.3 181 69.1
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 6.5e-62 241.1 166 74.7
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 1.1e-61 240.4 159 77.4
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 1.5e-61 240.0 181 72.4
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 1.5e-61 240.0 186 69.4
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 2.5e-61 239.2 188 67.0
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 3.2e-61 238.8 182 70.9
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 4.2e-61 238.4 182 70.3
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 4.2e-61 238.4 182 66.5
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 5.5e-61 238.0 182 69.8
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 7.2e-61 237.7 185 67.6
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.2e-60 236.9 183 71.6
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 1.6e-60 236.5 182 68.7
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 8.0e-60 234.2 181 68.5
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 8.0e-60 234.2 181 68.5
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 4.0e-59 231.9 156 72.4
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 4.0e-59 231.9 154 76.6
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 1.2e-58 230.3 184 66.3
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 2.6e-58 229.2 148 75.0
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 5.7e-58 228.0 116 95.7
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 1.3e-57 226.9 181 66.3
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 8.3e-57 224.2 180 64.4
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 1.1e-56 223.8 149 75.8
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 3.1e-56 222.2 181 64.1
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 7.0e-56 221.1 182 64.8
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 4.5e-55 218.4 117 89.7
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 1.0e-54 217.2 182 63.7
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 1.0e-54 217.2 180 63.9
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 2.9e-54 215.7 182 63.2
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 8.5e-54 214.2 115 87.0
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 1.9e-53 213.0 171 64.9
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 1.6e-52 209.9 181 60.2
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 1.6e-52 209.9 116 87.9
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 4.7e-52 208.4 181 59.7
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 6.1e-52 208.0 182 59.3
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 1.4e-51 206.8 174 61.5
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 1.4e-51 206.8 182 59.9
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 1.4e-51 206.8 115 84.3
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 2.3e-51 206.1 185 59.5
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 3.0e-51 205.7 182 59.3
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 8.8e-51 204.1 186 58.6
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 1.2e-50 203.8 186 59.1
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.2e-50 203.8 151 64.9
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 2.6e-50 202.6 185 57.3
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 2.6e-50 202.6 155 64.5
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 2.6e-50 202.6 114 83.3
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 3.4e-50 202.2 183 57.9
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 4.4e-50 201.8 182 57.7
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 7.5e-50 201.1 174 63.8
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 9.8e-50 200.7 184 58.2
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 9.8e-50 200.7 184 58.2
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 9.8e-50 200.7 182 59.9
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 2.8e-49 199.1 182 60.4
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 2.8e-49 199.1 183 56.3
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.4e-48 196.8 185 58.4
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 2.4e-48 196.1 176 58.5
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 2.0e-47 193.0 115 80.0
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 2.1e-44 183.0 164 61.6
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 6.8e-43 177.9 165 56.4
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 1.2e-42 177.2 181 57.5
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 3.7e-41 172.2 185 50.3
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 1.2e-39 167.2 149 57.0
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 1.6e-39 166.8 115 69.6
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 2.8e-36 156.0 110 72.7
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 3.1e-35 152.5 121 56.2
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 2.0e-34 149.8 108 62.0
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 3.4e-34 149.1 106 62.3
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 5.8e-34 148.3 107 60.7
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 5.2e-27 125.2 171 47.4
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 5.1e-22 108.6 59 83.1
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 5.1e-22 108.6 59 83.1
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 1.1e-21 107.5 103 59.2
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 3.7e-17 92.4 64 70.3
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 6.6e-14 81.6 107 49.5
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 6.6e-14 81.6 52 73.1


User provided reference genes

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