Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002433g0040 Nicotiana tabacum HOM05D005743 ORTHO05D007031 6.4e-57 223.8 107 100.0
Solyc06g009130.3 Solanum lycopersicum HOM05D005743 ORTHO05D007031 2.6e-34 148.7 97 73.2
Sopen06g003890 Solanum pennellii HOM05D005743 ORTHO05D007031 2.6e-34 148.7 97 73.2
Rhsim01G0285500 Rhododendron simsii HOM05D005743 ORTHO05D007031 1.3e-33 146.4 97 72.2
Nitab4.5_0005805g0040 Nicotiana tabacum HOM05D005743 ORTHO05D007031 2.2e-33 145.6 97 72.2
CAN.G1280.3 Capsicum annuum HOM05D005743 ORTHO05D007031 2.9e-33 145.2 97 71.1
CAN.G1989.8 Capsicum annuum HOM05D005743 ORTHO05D007031 2.9e-33 145.2 97 71.1
Nn4g25787 Nelumbo nucifera HOM05D005743 ORTHO05D007031 2.9e-33 145.2 97 71.1
DCAR_005790 Daucus carota HOM05D005743 ORTHO05D007031 3.8e-33 144.8 97 70.1
Nitab4.5_0002470g0070 Nicotiana tabacum HOM05D005743 ORTHO05D007031 6.4e-33 144.1 97 71.1
Atru.chr5.1142 Acer truncatum HOM05D005743 ORTHO05D007031 1.9e-32 142.5 97 70.1
Cpa.g.sc9.258 Carica papaya HOM05D005743 ORTHO05D007031 2.4e-32 142.1 97 70.1
Oeu046676.1 Olea europaea HOM05D005743 ORTHO05D007031 2.4e-32 142.1 97 72.2
Haze_04942 Corylus avellana HOM05D005743 ORTHO05D007031 3.2e-32 141.7 97 70.1
Migut.D00150 Erythranthe guttata HOM05D005743 ORTHO05D007031 3.2e-32 141.7 97 70.1
Cfa005908 Carpinus fangiana HOM05D005743 ORTHO05D007031 4.2e-32 141.4 97 70.1
MBI18_g06031_MAGBIO Magnolia biondii HOM05D005743 ORTHO05D007031 4.2e-32 141.4 97 69.1
QL12p028420 Quercus lobata HOM05D005743 ORTHO05D007031 4.2e-32 141.4 97 67.0
CANSAT25G1370 Cannabis sativa HOM05D005743 ORTHO05D007031 5.4e-32 141.0 97 72.2
Manes.01G219600 Manihot esculenta HOM05D005743 ORTHO05D007031 5.4e-32 141.0 97 69.1
SalBow3G4402 Salvia bowleyana HOM05D005743 ORTHO05D007031 5.4e-32 141.0 96 72.9
Sed0000130 Sechium edule HOM05D005743 ORTHO05D007031 7.1e-32 140.6 97 69.1
Dinv19686 Davidia involucrata HOM05D005743 ORTHO05D007031 9.3e-32 140.2 97 71.1
Lj2A1195G24 Lonicera japonica HOM05D005743 ORTHO05D007031 9.3e-32 140.2 96 70.8
Ciclev10019600m.g Citrus clementina HOM05D005743 ORTHO05D007031 1.6e-31 139.4 97 69.1
Cc01_g20880 Coffea canephora HOM05D005743 ORTHO05D007031 1.6e-31 139.4 97 70.1
Actinidia24820 Actinidia chinensis HOM05D005743 ORTHO05D007031 2.1e-31 139.0 97 70.1
Hma1.2p1_0491F.1_g164590 Hydrangea macrophylla HOM05D005743 ORTHO05D007031 2.1e-31 139.0 97 69.1
TAR362G0334 Trochodendron aralioides HOM05D005743 ORTHO05D007031 2.1e-31 139.0 97 70.1
vmacro15016 Vaccinium macrocarpon HOM05D005743 ORTHO05D007031 2.7e-31 138.7 95 70.5
FvH4_2g25770 Fragaria vesca HOM05D005743 ORTHO05D007031 4.6e-31 137.9 97 70.1
PGR044G1461 Punica granatum HOM05D005743 ORTHO05D007031 6.0e-31 137.5 97 69.1
Migut.O00421 Erythranthe guttata HOM05D005743 ORTHO05D007031 1.0e-30 136.7 97 69.1
TWI59G0198 Tripterygium wilfordii HOM05D005743 ORTHO05D007031 1.0e-30 136.7 97 68.0
MELO3C017953.2 Cucumis melo HOM05D005743 ORTHO05D007031 1.3e-30 136.3 97 66.0
Thecc.01G301000 Theobroma cacao HOM05D005743 ORTHO05D007031 1.7e-30 136.0 97 67.0
ClCG10G010970 Citrullus lanatus HOM05D005743 ORTHO05D007031 2.3e-30 135.6 97 67.0
COL.COLO4_23341 Corchorus olitorius HOM05D005743 ORTHO05D007031 2.3e-30 135.6 97 68.0
Duzib138G1616 Durio zibethinus HOM05D005743 ORTHO05D007031 2.3e-30 135.6 97 68.0
Lsat_1_v5_gn_5_191280 Lactuca sativa HOM05D005743 ORTHO05D007031 2.3e-30 135.6 97 64.9
SalBow2G1764 Salvia bowleyana HOM05D005743 ORTHO05D007031 2.3e-30 135.6 97 66.0
Aqoxy2G02938 Aquilegia oxysepala HOM05D005743 ORTHO05D007031 3.0e-30 135.2 97 66.0
SGA_v2.0_scaffold198G41143 Striga asiatica HOM05D005743 ORTHO05D007031 3.9e-30 134.8 97 68.0
arahy.Tifrunner.gnm1.ann1.V1RZF6 Arachis hypogaea HOM05D005743 ORTHO05D007031 5.1e-30 134.4 97 66.0
CsaV3_4G000840 Cucumis sativus L. HOM05D005743 ORTHO05D007031 5.1e-30 134.4 97 64.9
FAN20G0637 Fragaria x ananassa HOM05D005743 ORTHO05D007031 5.1e-30 134.4 97 68.0
FAN27G1322 Fragaria x ananassa HOM05D005743 ORTHO05D007031 5.1e-30 134.4 97 68.0
PSO407G0387 Papaver somniferum HOM05D005743 ORTHO05D007031 5.1e-30 134.4 97 67.0
A05p00330 Brassica napus HOM05D005743 ORTHO05D007031 6.6e-30 134.0 97 66.0
BraA05t19031Z Brassica rapa HOM05D005743 ORTHO05D007031 6.6e-30 134.0 97 66.0
Psat6g165240 Pisum sativum HOM05D005743 ORTHO05D007031 6.6e-30 134.0 97 64.9
PSO170G2277 Papaver somniferum HOM05D005743 ORTHO05D007031 8.7e-30 133.7 97 66.0
EL10Ac7g17510 Beta vulgaris HOM05D005743 ORTHO05D007031 1.1e-29 133.3 97 63.9
C04p00250 Brassica napus HOM05D005743 ORTHO05D007031 1.1e-29 133.3 97 64.9
BolC4t21668H Brassica oleracea HOM05D005743 ORTHO05D007031 1.1e-29 133.3 97 64.9
arahy.Tifrunner.gnm1.ann1.39WPG8 Arachis hypogaea HOM05D005743 ORTHO05D007031 1.5e-29 132.9 97 64.9
Migut.N01507 Erythranthe guttata HOM05D005743 ORTHO05D007031 1.5e-29 132.9 97 68.0
FAN15G2676 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.5e-29 132.9 97 67.0
HPP92_016082 Vanilla planifolia HOM05D005743 ORTHO05D007031 1.5e-29 132.9 97 67.0
VMungo0720G3165 Vigna mungo HOM05D005743 ORTHO05D007031 1.5e-29 132.9 97 63.9
BcaB02g08759 Brassica carinata HOM05D005743 ORTHO05D007031 1.9e-29 132.5 97 64.9
Glyma.10G018000 Glycine max HOM05D005743 ORTHO05D007031 1.9e-29 132.5 97 63.9
Potri.014G128600 Populus trichocarpa HOM05D005743 ORTHO05D007031 1.9e-29 132.5 97 66.0
TPR.G33974 Trifolium pratense HOM05D005743 ORTHO05D007031 1.9e-29 132.5 97 63.9
THA.LOC104817489 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 2.5e-29 132.1 97 64.9
Gorai.007G127900 Gossypium raimondii HOM05D005743 ORTHO05D007031 3.3e-29 131.7 97 66.0
AL4G47180 Arabidopsis lyrata HOM05D005743 ORTHO05D007031 4.3e-29 131.3 97 63.9
AT2G47600 Arabidopsis thaliana HOM05D005743 ORTHO05D007031 4.3e-29 131.3 97 63.9
Carub.0004s3033 Capsella rubella HOM05D005743 ORTHO05D007031 4.3e-29 131.3 97 63.9
Ca_10331_v3 Cicer arietinum L. HOM05D005743 ORTHO05D007031 4.3e-29 131.3 97 63.9
Thhalv10001391m.g Eutrema salsugineum HOM05D005743 ORTHO05D007031 4.3e-29 131.3 97 63.9
RcHm_v2.0_Chr6g0294071 Rosa chinensis HOM05D005743 ORTHO05D007031 4.3e-29 131.3 95 66.3
Medtr1g088430 Medicago truncatula HOM05D005743 ORTHO05D007031 5.6e-29 131.0 97 62.9
Prupe.8G261900 Prunus persica HOM05D005743 ORTHO05D007031 5.6e-29 131.0 97 66.0
GSVIVG01028023001 Vitis vinifera HOM05D005743 ORTHO05D007031 5.6e-29 131.0 95 68.4
CARHR143000 Cardamine hirsuta HOM05D005743 ORTHO05D007031 7.3e-29 130.6 97 62.9
HanXRQChr13g0413001 Helianthus annuus HOM05D005743 ORTHO05D007031 7.3e-29 130.6 97 64.9
AUR62008667 Chenopodium quinoa HOM05D005743 ORTHO05D007031 9.6e-29 130.2 97 64.9
AUR62025577 Chenopodium quinoa HOM05D005743 ORTHO05D007031 9.6e-29 130.2 97 64.9
Eucgr.K03488 Eucalyptus grandis HOM05D005743 ORTHO05D007031 9.6e-29 130.2 97 63.9
MD03G1288600 Malus domestica HOM05D005743 ORTHO05D007031 9.6e-29 130.2 97 64.9
Os11g0660000 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 9.6e-29 130.2 99 61.6
CDE02G2026 Ceratophyllum demersum HOM05D005743 ORTHO05D007031 1.3e-28 129.8 97 64.9
Gohir.D11G119400 Gossypium hirsutum HOM05D005743 ORTHO05D007031 1.3e-28 129.8 97 64.9
Phvul.007G147000 Phaseolus vulgaris HOM05D005743 ORTHO05D007031 1.3e-28 129.8 97 62.9
ECA248G2514 Erigeron canadensis HOM05D005743 ORTHO05D007031 1.6e-28 129.4 97 62.9
Lj5g0015401 Lotus japonicus HOM05D005743 ORTHO05D007031 1.6e-28 129.4 97 63.9
Aa31LG1G28940 Aethionema arabicum HOM05D005743 ORTHO05D007031 2.1e-28 129.0 97 62.9
THA.LOC104827666 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 4.8e-28 127.9 97 62.9
Sc05g0003820 Simmondsia chinensis HOM05D005743 ORTHO05D007031 6.2e-28 127.5 97 62.9
CSS0024650 Camellia sinensis var. sinensis HOM05D005743 ORTHO05D007031 1.4e-27 126.3 97 61.9
Sc05g0003780 Simmondsia chinensis HOM05D005743 ORTHO05D007031 1.4e-27 126.3 97 61.9
Eucgr.K03487 Eucalyptus grandis HOM05D005743 ORTHO05D007031 2.4e-27 125.6 97 62.9
Hund18172 Selenicereus undatus HOM05D005743 ORTHO05D007031 2.4e-27 125.6 97 59.8
RcHm_v2.0_Chr6g0294081 Rosa chinensis HOM05D005743 ORTHO05D007031 4.0e-27 124.8 92 67.4
Ah.08g213420 Amaranthus hybridus HOM05D005743 ORTHO05D007031 4.5e-26 121.3 91 63.7
Peaxi162Scf00399g00716 Petunia axillaris HOM05D005743 ORTHO05D007031 4.5e-26 121.3 84 72.6
EL10Ac3g06395 Beta vulgaris HOM05D005743 ORTHO05D007031 2.3e-22 109.0 95 53.7
Sabra14G0095500 Salix brachista HOM05D005743 ORTHO05D007031 8.7e-22 107.1 83 61.4
SEGI_24798 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 4.8e-20 101.3 97 50.5
Nitab4.5_0001879g0130 Nicotiana tabacum HOM05D005743 ORTHO05D007031 8.1e-20 100.5 67 77.6
SGA_v2.0_scaffold1G00362 Striga asiatica HOM05D005743 ORTHO05D007031 1.2e-18 96.7 94 58.5
Pp3c1_39250 Physcomitrium patens HOM05D005743 ORTHO05D007031 3.5e-15 85.1 94 44.7
AagrBONN_evm.TU.Sc2ySwM_344.5359 Anthoceros agrestis HOM05D005743 ORTHO05D007031 6.0e-15 84.3 93 47.3
FAN24G1083 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.3e-14 83.2 47 76.6
Pp3c2_6060 Physcomitrium patens HOM05D005743 ORTHO05D007031 3.9e-14 81.6 94 41.5
AagrBONN_evm.TU.Sc2ySwM_368.1084 Anthoceros agrestis HOM05D005743 ORTHO05D007031 1.5e-13 79.7 95 40.0
Mapoly0134s0038 Marchantia polymorpha HOM05D005743 ORTHO05D007031 5.6e-13 77.8 94 43.6
Peaxi162Scf00001g04234 Petunia axillaris HOM05D005743 ORTHO05D007031 2.6e-10 68.9 41 75.6
CBR_g22437 Chara braunii HOM05D005743 ORTHO05D007031 9.3e-08 60.5 94 29.8
Lalb_Chr06g0166491 Lupinus albus HOM05D005743 ORTHO05D007031 1.2e-07 60.1 30 80.0
PRCOL_00004461 Prasinoderma coloniale HOM05D005743 ORTHO05D007031 1.8e-06 56.2 93 36.6


User provided reference genes

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