Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002433g0030 Nicotiana tabacum HOM05D005743 ORTHO05D007031 3.9e-125 451.4 221 100.0
Nitab4.5_0001879g0130 Nicotiana tabacum HOM05D005743 ORTHO05D007031 8.7e-93 344.0 299 64.9
Sopen06g003890 Solanum pennellii HOM05D005743 ORTHO05D007031 2.0e-73 279.6 288 56.2
Solyc06g009130.3 Solanum lycopersicum HOM05D005743 ORTHO05D007031 3.4e-73 278.9 288 56.6
Peaxi162Scf00399g00716 Petunia axillaris HOM05D005743 ORTHO05D007031 2.9e-72 275.8 286 56.3
Peaxi162Scf00001g04234 Petunia axillaris HOM05D005743 ORTHO05D007031 1.4e-71 273.5 273 59.3
Nitab4.5_0005805g0040 Nicotiana tabacum HOM05D005743 ORTHO05D007031 9.4e-71 270.8 288 54.9
Nitab4.5_0002470g0070 Nicotiana tabacum HOM05D005743 ORTHO05D007031 2.7e-70 269.2 285 55.1
CAN.G1280.3 Capsicum annuum HOM05D005743 ORTHO05D007031 4.4e-68 261.9 288 54.2
CAN.G1989.8 Capsicum annuum HOM05D005743 ORTHO05D007031 4.4e-68 261.9 288 54.2
Dinv19686 Davidia involucrata HOM05D005743 ORTHO05D007031 6.3e-67 258.1 286 53.1
TAR362G0334 Trochodendron aralioides HOM05D005743 ORTHO05D007031 2.0e-65 253.1 265 53.2
Atru.chr5.1142 Acer truncatum HOM05D005743 ORTHO05D007031 5.0e-64 248.4 283 51.6
Migut.D00150 Erythranthe guttata HOM05D005743 ORTHO05D007031 6.5e-64 248.1 278 53.6
CSS0024650 Camellia sinensis var. sinensis HOM05D005743 ORTHO05D007031 1.5e-63 246.9 287 49.5
Ciclev10019600m.g Citrus clementina HOM05D005743 ORTHO05D007031 2.1e-62 243.0 281 51.6
MBI18_g06031_MAGBIO Magnolia biondii HOM05D005743 ORTHO05D007031 1.4e-61 240.4 287 49.5
TWI59G0198 Tripterygium wilfordii HOM05D005743 ORTHO05D007031 2.3e-61 239.6 286 50.0
SGA_v2.0_scaffold1G00362 Striga asiatica HOM05D005743 ORTHO05D007031 5.2e-61 238.4 260 55.4
Hma1.2p1_0491F.1_g164590 Hydrangea macrophylla HOM05D005743 ORTHO05D007031 6.7e-61 238.0 276 50.7
FAN24G1083 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.5e-60 236.9 268 50.4
Oeu046676.1 Olea europaea HOM05D005743 ORTHO05D007031 2.0e-60 236.5 286 50.7
Lj2A1195G24 Lonicera japonica HOM05D005743 ORTHO05D007031 1.3e-59 233.8 269 50.6
THA.LOC104817489 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 1.7e-59 233.4 285 48.8
QL12p028420 Quercus lobata HOM05D005743 ORTHO05D007031 2.8e-59 232.6 269 52.8
Potri.014G128600 Populus trichocarpa HOM05D005743 ORTHO05D007031 4.8e-59 231.9 283 49.5
Prupe.8G261900 Prunus persica HOM05D005743 ORTHO05D007031 4.8e-59 231.9 273 49.5
Thecc.01G301000 Theobroma cacao HOM05D005743 ORTHO05D007031 6.3e-59 231.5 268 52.2
COL.COLO4_23341 Corchorus olitorius HOM05D005743 ORTHO05D007031 1.1e-58 230.7 275 50.9
VMungo0720G3165 Vigna mungo HOM05D005743 ORTHO05D007031 3.1e-58 229.2 269 50.9
Lj5g0015401 Lotus japonicus HOM05D005743 ORTHO05D007031 4.1e-58 228.8 270 50.0
Manes.01G219600 Manihot esculenta HOM05D005743 ORTHO05D007031 5.3e-58 228.4 276 47.5
Sabra14G0095500 Salix brachista HOM05D005743 ORTHO05D007031 5.3e-58 228.4 326 44.8
CANSAT25G1370 Cannabis sativa HOM05D005743 ORTHO05D007031 9.1e-58 227.6 270 50.4
Cfa005908 Carpinus fangiana HOM05D005743 ORTHO05D007031 9.1e-58 227.6 283 50.5
MELO3C017953.2 Cucumis melo HOM05D005743 ORTHO05D007031 9.1e-58 227.6 280 49.6
TPR.G33974 Trifolium pratense HOM05D005743 ORTHO05D007031 9.1e-58 227.6 265 51.7
CsaV3_4G000840 Cucumis sativus L. HOM05D005743 ORTHO05D007031 1.2e-57 227.3 280 49.3
FAN20G0637 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.6e-57 226.9 268 49.3
Aqoxy2G02938 Aquilegia oxysepala HOM05D005743 ORTHO05D007031 2.0e-57 226.5 270 49.6
Ca_10331_v3 Cicer arietinum L. HOM05D005743 ORTHO05D007031 2.0e-57 226.5 262 51.5
PSO170G2277 Papaver somniferum HOM05D005743 ORTHO05D007031 2.7e-57 226.1 276 50.0
PGR044G1461 Punica granatum HOM05D005743 ORTHO05D007031 2.7e-57 226.1 278 50.4
Gorai.007G127900 Gossypium raimondii HOM05D005743 ORTHO05D007031 5.9e-57 224.9 268 50.0
RcHm_v2.0_Chr6g0294071 Rosa chinensis HOM05D005743 ORTHO05D007031 5.9e-57 224.9 274 49.3
Sc05g0003820 Simmondsia chinensis HOM05D005743 ORTHO05D007031 5.9e-57 224.9 268 49.6
BcaB02g08759 Brassica carinata HOM05D005743 ORTHO05D007031 1.0e-56 224.2 253 51.4
Sed0000130 Sechium edule HOM05D005743 ORTHO05D007031 1.0e-56 224.2 277 49.1
arahy.Tifrunner.gnm1.ann1.V1RZF6 Arachis hypogaea HOM05D005743 ORTHO05D007031 1.3e-56 223.8 269 49.4
Gohir.A11G114301 Gossypium hirsutum HOM05D005743 ORTHO05D007031 2.9e-56 222.6 268 50.4
arahy.Tifrunner.gnm1.ann1.39WPG8 Arachis hypogaea HOM05D005743 ORTHO05D007031 3.8e-56 222.2 268 50.4
ClCG10G010970 Citrullus lanatus HOM05D005743 ORTHO05D007031 3.8e-56 222.2 317 44.5
SalBow2G1764 Salvia bowleyana HOM05D005743 ORTHO05D007031 6.5e-56 221.5 288 47.2
Glyma.10G018000 Glycine max HOM05D005743 ORTHO05D007031 8.5e-56 221.1 268 49.6
PSO407G0387 Papaver somniferum HOM05D005743 ORTHO05D007031 1.1e-55 220.7 276 49.3
Hund18172 Selenicereus undatus HOM05D005743 ORTHO05D007031 1.1e-55 220.7 260 51.5
Rhsim01G0285500 Rhododendron simsii HOM05D005743 ORTHO05D007031 2.5e-55 219.5 282 47.9
Eucgr.K03487 Eucalyptus grandis HOM05D005743 ORTHO05D007031 3.2e-55 219.2 235 54.0
Gohir.D11G119400 Gossypium hirsutum HOM05D005743 ORTHO05D007031 3.2e-55 219.2 234 53.8
SalBow3G4402 Salvia bowleyana HOM05D005743 ORTHO05D007031 3.2e-55 219.2 280 49.3
Migut.O00421 Erythranthe guttata HOM05D005743 ORTHO05D007031 4.2e-55 218.8 281 47.3
MD03G1288600 Malus domestica HOM05D005743 ORTHO05D007031 4.2e-55 218.8 273 47.3
THA.LOC104827666 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 4.2e-55 218.8 286 46.5
FAN15G2676 Fragaria x ananassa HOM05D005743 ORTHO05D007031 5.5e-55 218.4 268 48.1
Medtr1g088430 Medicago truncatula HOM05D005743 ORTHO05D007031 9.4e-55 217.6 265 50.2
GSVIVG01028023001 Vitis vinifera HOM05D005743 ORTHO05D007031 9.4e-55 217.6 262 51.1
Phvul.007G147000 Phaseolus vulgaris HOM05D005743 ORTHO05D007031 2.1e-54 216.5 267 49.4
ATR0706G014 Amborella trichopoda HOM05D005743 ORTHO05D007031 4.7e-54 215.3 264 49.2
Ah.08g213420 Amaranthus hybridus HOM05D005743 ORTHO05D007031 8.0e-54 214.5 267 47.9
Duzib138G1616 Durio zibethinus HOM05D005743 ORTHO05D007031 8.0e-54 214.5 272 48.9
Migut.N01507 Erythranthe guttata HOM05D005743 ORTHO05D007031 8.0e-54 214.5 284 47.2
BraA05t19031Z Brassica rapa HOM05D005743 ORTHO05D007031 1.0e-53 214.2 286 45.1
Thhalv10001391m.g Eutrema salsugineum HOM05D005743 ORTHO05D007031 1.0e-53 214.2 284 45.1
Sc05g0003780 Simmondsia chinensis HOM05D005743 ORTHO05D007031 1.8e-53 213.4 267 47.2
AL4G47180 Arabidopsis lyrata HOM05D005743 ORTHO05D007031 4.0e-53 212.2 289 45.3
A05p00330 Brassica napus HOM05D005743 ORTHO05D007031 4.0e-53 212.2 286 45.1
C04p00250 Brassica napus HOM05D005743 ORTHO05D007031 4.0e-53 212.2 286 44.8
BolC4t21668H Brassica oleracea HOM05D005743 ORTHO05D007031 4.0e-53 212.2 286 44.8
RcHm_v2.0_Chr6g0294081 Rosa chinensis HOM05D005743 ORTHO05D007031 4.0e-53 212.2 274 47.1
Hund18173 Selenicereus undatus HOM05D005743 ORTHO05D007031 4.0e-53 212.2 268 48.9
AT2G47600 Arabidopsis thaliana HOM05D005743 ORTHO05D007031 1.5e-52 210.3 289 45.0
Carub.0004s3033 Capsella rubella HOM05D005743 ORTHO05D007031 1.5e-52 210.3 287 44.6
CARHR143000 Cardamine hirsuta HOM05D005743 ORTHO05D007031 2.0e-52 209.9 287 44.3
Cpa.g.sc9.258 Carica papaya HOM05D005743 ORTHO05D007031 4.4e-52 208.8 266 47.4
DCAR_005790 Daucus carota HOM05D005743 ORTHO05D007031 4.4e-52 208.8 288 45.1
Aa31LG1G28940 Aethionema arabicum HOM05D005743 ORTHO05D007031 5.7e-52 208.4 290 45.2
Cc01_g20880 Coffea canephora HOM05D005743 ORTHO05D007031 9.8e-52 207.6 267 47.6
SGA_v2.0_scaffold198G41143 Striga asiatica HOM05D005743 ORTHO05D007031 4.8e-51 205.3 292 43.8
Lalb_Chr06g0166491 Lupinus albus HOM05D005743 ORTHO05D007031 1.1e-50 204.1 268 47.0
AUR62008667 Chenopodium quinoa HOM05D005743 ORTHO05D007031 4.1e-50 202.2 267 46.4
HPP92_016082 Vanilla planifolia HOM05D005743 ORTHO05D007031 5.4e-50 201.8 267 46.4
AUR62025577 Chenopodium quinoa HOM05D005743 ORTHO05D007031 7.0e-50 201.4 269 46.5
Os11g0660000 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 2.0e-49 199.9 255 47.5
HanXRQChr13g0413001 Helianthus annuus HOM05D005743 ORTHO05D007031 1.0e-48 197.6 273 44.0
Lsat_1_v5_gn_5_191280 Lactuca sativa HOM05D005743 ORTHO05D007031 1.7e-48 196.8 267 45.7
Zm00001eb165450 Zea mays HOM05D005743 ORTHO05D007031 4.2e-47 192.2 260 45.4
EL10Ac7g17510 Beta vulgaris HOM05D005743 ORTHO05D007031 4.0e-45 185.7 259 44.4
CDE02G2026 Ceratophyllum demersum HOM05D005743 ORTHO05D007031 5.2e-45 185.3 240 47.5
Haze_04942 Corylus avellana HOM05D005743 ORTHO05D007031 1.3e-43 180.6 286 44.4
FvH4_2g25770 Fragaria vesca HOM05D005743 ORTHO05D007031 6.3e-43 178.3 226 47.8
THA.LOC104798829 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 1.2e-41 174.1 156 60.3
ECA248G2514 Erigeron canadensis HOM05D005743 ORTHO05D007031 1.0e-40 171.0 232 46.1
Eucgr.K03488 Eucalyptus grandis HOM05D005743 ORTHO05D007031 9.5e-39 164.5 220 46.4
Rhsim05G0173900 Rhododendron simsii HOM05D005743 ORTHO05D007031 1.0e-37 161.0 134 64.2
CiPaw.08G094900 Carya illinoinensis HOM05D005743 ORTHO05D007031 1.0e-32 144.4 224 44.2
Actinidia24820 Actinidia chinensis HOM05D005743 ORTHO05D007031 3.6e-30 136.0 231 41.1
Mapoly0134s0038 Marchantia polymorpha HOM05D005743 ORTHO05D007031 7.5e-20 101.7 137 44.5
SMO351G0556 Selaginella moellendorffii HOM05D005743 ORTHO05D007031 2.4e-18 96.7 215 31.6
Nn4g25787 Nelumbo nucifera HOM05D005743 ORTHO05D007031 1.2e-17 94.4 78 60.3
Zm00001eb407450 Zea mays HOM05D005743 ORTHO05D007031 1.2e-17 94.4 87 56.3
AagrBONN_evm.TU.Sc2ySwM_344.5359 Anthoceros agrestis HOM05D005743 ORTHO05D007031 1.6e-17 94.0 133 40.6
CBR_g22437 Chara braunii HOM05D005743 ORTHO05D007031 3.9e-16 89.4 126 41.3
FAN27G1322 Fragaria x ananassa HOM05D005743 ORTHO05D007031 9.5e-15 84.7 78 57.7
AagrBONN_evm.TU.Sc2ySwM_368.1084 Anthoceros agrestis HOM05D005743 ORTHO05D007031 1.6e-14 84.0 217 29.5
Psat6g165240 Pisum sativum HOM05D005743 ORTHO05D007031 8.1e-14 81.6 77 59.7
Pp3c2_6060 Physcomitrium patens HOM05D005743 ORTHO05D007031 1.1e-13 81.3 141 36.9
vmacro15016 Vaccinium macrocarpon HOM05D005743 ORTHO05D007031 1.4e-13 80.9 80 48.8
Pp3c1_39250 Physcomitrium patens HOM05D005743 ORTHO05D007031 6.8e-13 78.6 114 42.1
Actinidia26720 Actinidia chinensis HOM05D005743 ORTHO05D007031 4.9e-11 72.4 60 55.0
SEGI_31813 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 5.4e-10 68.9 83 49.4
SEGI_40223 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 1.5e-07 60.8 83 48.2
Os02g0644900 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 1.6e-06 57.4 56 48.2


User provided reference genes

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