Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002426g0030 Nicotiana tabacum HOM05D004133 ORTHO05D004683 6.9e-73 277.3 152 100.0
Nitab4.5_0002183g0030 Nicotiana tabacum HOM05D004133 ORTHO05D004683 1.5e-38 163.3 152 64.5
Nitab4.5_0000875g0040 Nicotiana tabacum HOM05D004133 ORTHO05D004683 7.2e-38 161.0 152 63.8
Peaxi162Scf00259g00026 Petunia axillaris HOM05D004133 ORTHO05D004683 2.7e-32 142.5 152 62.5
Dinv32152 Davidia involucrata HOM05D004133 ORTHO05D004683 3.0e-28 129.0 154 55.8
Rhsim13G0198700 Rhododendron simsii HOM05D004133 ORTHO05D004683 1.5e-27 126.7 153 56.9
Peaxi162Scf00098g01532 Petunia axillaris HOM05D004133 ORTHO05D004683 2.6e-27 125.9 152 57.2
vmacro04056 Vaccinium macrocarpon HOM05D004133 ORTHO05D004683 9.8e-27 124.0 153 56.2
Cc01_g07980 Coffea canephora HOM05D004133 ORTHO05D004683 1.1e-25 120.6 140 55.7
Lj2A832T11 Lonicera japonica HOM05D004133 ORTHO05D004683 1.8e-25 119.8 152 52.6
Hma1.2p1_1811F.1_g303595 Hydrangea macrophylla HOM05D004133 ORTHO05D004683 4.5e-24 115.2 154 51.9
Actinidia12904 Actinidia chinensis HOM05D004133 ORTHO05D004683 8.5e-23 110.9 149 50.3
Oeu051476.1 Olea europaea HOM05D004133 ORTHO05D004683 1.1e-22 110.5 151 51.7
Solyc06g073840.3 Solanum lycopersicum HOM05D004133 ORTHO05D004683 2.5e-22 109.4 152 52.0
CAN.G1463.21 Capsicum annuum HOM05D004133 ORTHO05D004683 3.2e-22 109.0 152 52.0
TWI79G1660 Tripterygium wilfordii HOM05D004133 ORTHO05D004683 3.2e-22 109.0 154 49.4
CSS0023526 Camellia sinensis var. sinensis HOM05D004133 ORTHO05D004683 4.2e-22 108.6 154 51.9
CiPaw.13G126000 Carya illinoinensis HOM05D004133 ORTHO05D004683 5.5e-22 108.2 153 49.7
PGR119G1432 Punica granatum HOM05D004133 ORTHO05D004683 7.2e-22 107.8 156 50.0
Sopen06g030240 Solanum pennellii HOM05D004133 ORTHO05D004683 7.2e-22 107.8 152 51.3
PGSC0003DMG400005939 Solanum tuberosum HOM05D004133 ORTHO05D004683 7.2e-22 107.8 152 51.3
Prupe.6G148800 Prunus persica HOM05D004133 ORTHO05D004683 1.6e-21 106.7 154 50.0
TWI31G0797 Tripterygium wilfordii HOM05D004133 ORTHO05D004683 1.6e-21 106.7 154 48.7
Cfa010217 Carpinus fangiana HOM05D004133 ORTHO05D004683 2.1e-21 106.3 152 47.4
Haze_23604 Corylus avellana HOM05D004133 ORTHO05D004683 2.1e-21 106.3 152 47.4
arahy.Tifrunner.gnm1.ann1.79DDAD Arachis hypogaea HOM05D004133 ORTHO05D004683 8.0e-21 104.4 152 48.0
SGA_v2.0_scaffold16G07524 Striga asiatica HOM05D004133 ORTHO05D004683 1.0e-20 104.0 131 54.2
Phvul.011G101100 Phaseolus vulgaris HOM05D004133 ORTHO05D004683 1.4e-20 103.6 154 48.1
Sabra09G0120200 Salix brachista HOM05D004133 ORTHO05D004683 1.4e-20 103.6 156 48.7
CSS0028218 Camellia sinensis var. sinensis HOM05D004133 ORTHO05D004683 2.3e-20 102.8 152 49.3
GSVIVG01037520001 Vitis vinifera HOM05D004133 ORTHO05D004683 2.3e-20 102.8 154 48.7
TAR636G2180 Trochodendron aralioides HOM05D004133 ORTHO05D004683 3.0e-20 102.4 154 51.3
arahy.Tifrunner.gnm1.ann1.A1UAR7 Arachis hypogaea HOM05D004133 ORTHO05D004683 5.2e-20 101.7 152 47.4
MD03G1160600 Malus domestica HOM05D004133 ORTHO05D004683 5.2e-20 101.7 96 62.5
Migut.N02432 Erythranthe guttata HOM05D004133 ORTHO05D004683 8.8e-20 100.9 155 49.0
unitig_8.g2980 Utricularia gibba HOM05D004133 ORTHO05D004683 8.8e-20 100.9 152 48.7
VMungo1127G0510 Vigna mungo HOM05D004133 ORTHO05D004683 2.6e-19 99.4 155 47.1
PSO384G2343 Papaver somniferum HOM05D004133 ORTHO05D004683 4.4e-19 98.6 156 48.1
HanXRQChr13g0420391 Helianthus annuus HOM05D004133 ORTHO05D004683 1.3e-18 97.1 137 46.7
Hund18814 Selenicereus undatus HOM05D004133 ORTHO05D004683 2.2e-18 96.3 155 45.8
Ca_19492_v3 Cicer arietinum L. HOM05D004133 ORTHO05D004683 2.8e-18 95.9 167 44.9
PSO339G3867 Papaver somniferum HOM05D004133 ORTHO05D004683 2.8e-18 95.9 156 47.4
EL10Ac7g16263 Beta vulgaris HOM05D004133 ORTHO05D004683 4.9e-18 95.1 156 48.1
CANSAT54G1788 Cannabis sativa HOM05D004133 ORTHO05D004683 6.3e-18 94.7 154 46.8
Carub.0006s1963 Capsella rubella HOM05D004133 ORTHO05D004683 8.3e-18 94.4 123 55.3
Thhalv10013111m.g Eutrema salsugineum HOM05D004133 ORTHO05D004683 8.3e-18 94.4 109 54.1
Lsat_1_v5_gn_3_115221 Lactuca sativa HOM05D004133 ORTHO05D004683 1.1e-17 94.0 133 45.9
Aa31LG1G13430 Aethionema arabicum HOM05D004133 ORTHO05D004683 4.1e-17 92.0 108 51.9
Sp6g23200 Schrenkiella parvula HOM05D004133 ORTHO05D004683 4.1e-17 92.0 109 53.2
MBI05_g40557_MAGBIO Magnolia biondii HOM05D004133 ORTHO05D004683 7.0e-17 91.3 155 45.2
Psat7g203680 Pisum sativum HOM05D004133 ORTHO05D004683 7.0e-17 91.3 153 45.1
ATR0697G090 Amborella trichopoda HOM05D004133 ORTHO05D004683 1.2e-16 90.5 152 45.4
Nn2g14411 Nelumbo nucifera HOM05D004133 ORTHO05D004683 2.7e-16 89.4 158 43.0
MELO3C014691.2 Cucumis melo HOM05D004133 ORTHO05D004683 3.5e-16 89.0 133 44.4
Sed0020599 Sechium edule HOM05D004133 ORTHO05D004683 3.5e-16 89.0 140 44.3
BcaC03g13852 Brassica carinata HOM05D004133 ORTHO05D004683 5.9e-16 88.2 153 45.8
Cpa.g.sc103.47 Carica papaya HOM05D004133 ORTHO05D004683 5.9e-16 88.2 155 42.6
Gorai.009G081800 Gossypium raimondii HOM05D004133 ORTHO05D004683 5.9e-16 88.2 92 56.5
Actinidia22456 Actinidia chinensis HOM05D004133 ORTHO05D004683 1.0e-15 87.4 79 62.0
TPR.G4594 Trifolium pratense HOM05D004133 ORTHO05D004683 1.7e-15 86.7 152 43.4
Medtr4g050120 Medicago truncatula HOM05D004133 ORTHO05D004683 3.8e-15 85.5 153 43.8
Nitab4.5_0006895g0030 Nicotiana tabacum HOM05D004133 ORTHO05D004683 5.0e-15 85.1 85 65.9
Lj3g0006419 Lotus japonicus HOM05D004133 ORTHO05D004683 6.6e-15 84.7 153 44.4
vmacro14308 Vaccinium macrocarpon HOM05D004133 ORTHO05D004683 6.6e-15 84.7 126 43.7
Gohir.A05G077350 Gossypium hirsutum HOM05D004133 ORTHO05D004683 8.6e-15 84.3 102 51.0
BcaB08g36460 Brassica carinata HOM05D004133 ORTHO05D004683 1.1e-14 84.0 123 44.7
Glyma.12G096600 Glycine max HOM05D004133 ORTHO05D004683 1.1e-14 84.0 152 42.8
Rhsim01G0198600 Rhododendron simsii HOM05D004133 ORTHO05D004683 1.1e-14 84.0 150 41.3
Dinv18868 Davidia involucrata HOM05D004133 ORTHO05D004683 1.5e-14 83.6 59 74.6
Glyma.06G308200 Glycine max HOM05D004133 ORTHO05D004683 1.5e-14 83.6 152 43.4
Lalb_Chr01g0005781 Lupinus albus HOM05D004133 ORTHO05D004683 1.5e-14 83.6 154 43.5
COL.COLO4_25369 Corchorus olitorius HOM05D004133 ORTHO05D004683 5.6e-14 81.6 48 85.4
Sabra04G0127700 Salix brachista HOM05D004133 ORTHO05D004683 5.6e-14 81.6 159 39.6
Os07g0161000 Oryza sativa ssp. japonica HOM05D004133 ORTHO05D004683 1.2e-13 80.5 135 40.7
QL01p018923 Quercus lobata HOM05D004133 ORTHO05D004683 1.2e-13 80.5 155 44.5
CARHR191540 Cardamine hirsuta HOM05D004133 ORTHO05D004683 1.6e-13 80.1 109 48.6
THA.LOC104810948 Tarenaya hassleriana HOM05D004133 ORTHO05D004683 8.0e-13 77.8 126 45.2
Thecc.09G268600 Theobroma cacao HOM05D004133 ORTHO05D004683 8.0e-13 77.8 154 42.9
HPP92_017668 Vanilla planifolia HOM05D004133 ORTHO05D004683 5.2e-12 75.1 108 49.1
CDE10G0036 Ceratophyllum demersum HOM05D004133 ORTHO05D004683 1.5e-11 73.6 130 40.0
Lalb_Chr19g0136091 Lupinus albus HOM05D004133 ORTHO05D004683 3.4e-11 72.4 152 38.8
BraA02t05633Z Brassica rapa HOM05D004133 ORTHO05D004683 7.5e-11 71.2 48 77.1
Gorai.004G011700 Gossypium raimondii HOM05D004133 ORTHO05D004683 7.5e-11 71.2 152 43.4
DCAR_012257 Daucus carota HOM05D004133 ORTHO05D004683 1.3e-10 70.5 166 41.6
Mapoly0077s0006 Marchantia polymorpha HOM05D004133 ORTHO05D004683 1.3e-10 70.5 139 35.3
SalBow3G0269 Salvia bowleyana HOM05D004133 ORTHO05D004683 2.2e-10 69.7 152 41.4
Sc21g0006690 Simmondsia chinensis HOM05D004133 ORTHO05D004683 2.9e-10 69.3 152 36.2
Gohir.D08G017300 Gossypium hirsutum HOM05D004133 ORTHO05D004683 3.7e-10 68.9 151 41.7
C05p31580 Brassica napus HOM05D004133 ORTHO05D004683 8.3e-10 67.8 53 66.0
Gohir.D05G080150 Gossypium hirsutum HOM05D004133 ORTHO05D004683 8.3e-10 67.8 127 38.6
MSTRG.17668 Avicennia marina HOM05D004133 ORTHO05D004683 2.4e-09 66.2 134 42.5
Gohir.A08G007200 Gossypium hirsutum HOM05D004133 ORTHO05D004683 3.2e-09 65.9 152 40.8
FAN21G0751 Fragaria x ananassa HOM05D004133 ORTHO05D004683 4.1e-09 65.5 154 38.3
Nitab4.5_0006895g0040 Nicotiana tabacum HOM05D004133 ORTHO05D004683 5.4e-09 65.1 40 85.0
Ciclev10004601m.g Citrus clementina HOM05D004133 ORTHO05D004683 7.0e-09 64.7 154 39.6
HanXRQChr05g0137041 Helianthus annuus HOM05D004133 ORTHO05D004683 9.2e-09 64.3 104 42.3
SMO141G0183 Selaginella moellendorffii HOM05D004133 ORTHO05D004683 5.9e-08 61.6 140 35.7
BraA03t10363Z Brassica rapa HOM05D004133 ORTHO05D004683 2.3e-07 59.7 110 41.8
FAN16G0897 Fragaria x ananassa HOM05D004133 ORTHO05D004683 2.3e-07 59.7 219 31.5
Zm00001eb300510 Zea mays HOM05D004133 ORTHO05D004683 3.0e-07 59.3 134 37.3
ECA238G1841 Erigeron canadensis HOM05D004133 ORTHO05D004683 3.9e-07 58.9 104 40.4
CsaV3_4G023240 Cucumis sativus L. HOM05D004133 ORTHO05D004683 1.5e-06 57.0 133 35.3
CBR_g30778 Chara braunii HOM05D004133 ORTHO05D004683 4.3e-06 55.5 113 34.5
AUR62001582 Chenopodium quinoa HOM05D004133 ORTHO05D004683 7.3e-06 54.7 109 39.4
Manes.11G104780 Manihot esculenta HOM05D004133 ORTHO05D004683 9.5e-06 54.3 151 34.4


User provided reference genes

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