Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002418g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.9e-119 431.8 204 100.0
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 4.8e-69 265.0 195 70.8
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 9.6e-62 240.7 190 66.8
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.3e-58 230.3 183 67.8
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 6.4e-58 228.0 208 61.1
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 1.6e-48 196.8 113 85.8
Cpa.g.sc263.24 Carica papaya HOM05D002965 ORTHO05D011068 4.6e-48 195.3 110 85.5
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 6.0e-48 194.9 268 45.9
Nitab4.5_0002558g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 3.3e-46 189.1 112 81.2
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 8.5e-42 174.5 202 53.0
Peaxi162Scf00863g00003 Petunia axillaris HOM05D002965 ORTHO05D011068 1.8e-36 156.8 90 84.4
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 1.3e-34 150.6 87 85.1
Ca_28560_v3 Cicer arietinum L. HOM05D002965 ORTHO05D010536 3.2e-33 146.0 128 60.9
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 3.6e-32 142.5 125 62.4
Nitab4.5_0000580g0190 Nicotiana tabacum HOM05D002965 ORTHO05D011068 3.9e-31 139.0 88 79.5
Nitab4.5_0001796g0200 Nicotiana tabacum HOM05D002965 ORTHO05D011068 8.8e-31 137.9 81 81.5
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 1.3e-29 134.0 83 80.7
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 1.2e-27 127.5 66 90.9
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 4.5e-27 125.6 66 89.4
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 4.5e-27 125.6 66 89.4
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 2.2e-26 123.2 66 87.9
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.2e-26 123.2 66 87.9
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.2e-26 123.2 66 87.9
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 3.8e-26 122.5 66 87.9
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 3.8e-26 122.5 66 87.9
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 3.8e-26 122.5 66 87.9
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 5.0e-26 122.1 95 67.4
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 8.5e-26 121.3 66 86.4
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.2e-24 117.5 71 78.9
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 1.2e-24 117.5 66 84.8
ECA246G1890 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-24 116.7 80 72.5
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 4.7e-24 115.5 66 84.8
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 4.7e-24 115.5 66 84.8
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 4.7e-24 115.5 66 84.8
Nitab4.5_0002653g0030 Nicotiana tabacum HOM05D002965 ORTHO05D011068 7.9e-24 114.8 113 56.6
Psat6g191080 Pisum sativum HOM05D002965 ORTHO05D010183 1.8e-23 113.6 78 71.8
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 3.9e-23 112.5 156 43.6
Nitab4.5_0005613g0030 Nicotiana tabacum HOM05D002965 ORTHO05D011068 3.9e-23 112.5 68 79.4
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.0e-22 110.2 68 75.0
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 2.6e-22 109.8 73 78.1
Sopen05g007970 Solanum pennellii HOM05D002965 ORTHO05D010183 1.3e-21 107.5 57 89.5
Aa31csc822G20 Aethionema arabicum HOM05D002965 ORTHO05D011068 1.2e-19 100.9 169 43.2
Peaxi162Scf02014g00001 Petunia axillaris HOM05D016050 ORTHO05D011068 3.2e-17 92.8 60 78.3
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 4.7e-16 89.0 66 69.7
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 1.0e-15 87.8 47 87.2
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 8.8e-15 84.7 296 30.7
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 9.7e-14 81.3 43 90.7
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 2.8e-13 79.7 46 82.6
CsaV3_UNG209190 Cucumis sativus L. HOM05D016050 ORTHO05D011068 3.7e-13 79.3 75 57.3
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 3.7e-13 79.3 47 76.6
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 6.3e-13 78.6 43 86.0
Nitab4.5_0000859g0160 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.4e-12 76.6 69 62.3
Nitab4.5_0001763g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 3.5e-11 72.8 40 87.5
SHI27034 Sapria himalayana HOM05D023343 ORTHO05D011068 7.7e-11 71.6 53 66.0
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 1.3e-10 70.9 42 83.3
SHI25680 Sapria himalayana HOM05D022652 ORTHO05D011068 6.5e-10 68.6 42 76.2
Nitab4.5_0000886g0150 Nicotiana tabacum HOM05D002965 ORTHO05D011068 8.5e-10 68.2 43 76.7
SHI29064 Sapria himalayana HOM05D002965 ORTHO05D010183 4.2e-09 65.9 48 66.7
Nitab4.5_0000215g0080 Nicotiana tabacum HOM05D002965 ORTHO05D011068 4.7e-08 62.4 59 57.6
ClCG01G010190 Citrullus lanatus HOM05D042035 ORTHO05D016641 8.0e-08 61.6 43 67.4
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 2.6e-06 56.6 37 73.0
Nitab4.5_0002072g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.6e-06 56.6 34 79.4
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 3.4e-06 56.2 28 92.9
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 3.4e-06 56.2 28 92.9
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 3.4e-06 56.2 28 92.9
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 4.4e-06 55.8 28 92.9


User provided reference genes

Program Settings