Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002414g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.4e-54 213.8 104 100.0
Nitab4.5_0001177g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.0e-40 166.8 98 84.7
Nitab4.5_0018223g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 8.4e-38 160.2 99 82.8
Nitab4.5_0002432g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.7e-33 144.8 98 78.6
Nitab4.5_0002534g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.3e-30 136.3 87 81.6
Nitab4.5_0013466g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.8e-23 110.9 76 76.3
Nitab4.5_0000646g0230 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.6e-23 110.5 69 78.3
Nitab4.5_0003288g0090 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.6e-23 110.5 67 76.1
Nitab4.5_0000403g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.5e-21 105.5 61 86.9
Nitab4.5_0016899g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.2e-21 104.8 89 65.2
Nitab4.5_0001614g0130 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.3e-21 103.6 68 76.5
Nitab4.5_0002311g0100 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.3e-19 99.8 63 81.0
Nitab4.5_0002908g0130 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-19 99.4 68 72.1
Nitab4.5_0001969g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.3e-19 99.0 63 77.8
Nitab4.5_0009026g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.3e-19 99.0 95 61.1
Nitab4.5_0000832g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.0e-19 98.6 63 81.0
Nitab4.5_0014346g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.0e-19 98.6 95 60.0
Nitab4.5_0005382g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.1e-19 97.8 99 60.6
Nitab4.5_0000839g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.1e-18 96.7 61 78.7
Nitab4.5_0000864g0160 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.1e-18 96.7 61 80.3
Nitab4.5_0000893g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.1e-18 96.7 95 61.1
Nitab4.5_0001992g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.4e-18 94.0 69 68.1
Nitab4.5_0004040g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.7e-18 93.6 63 74.6
Nitab4.5_0001928g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.3e-17 90.9 63 74.6
Nitab4.5_0002621g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.4e-16 89.7 63 71.4
Nitab4.5_0007069g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-16 89.4 63 73.0
Nitab4.5_0002848g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.2e-15 86.7 59 72.9
Nitab4.5_0009286g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.2e-15 86.7 63 69.8
Nitab4.5_0003021g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.9e-15 84.3 51 76.5
Nitab4.5_0000074g0130 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.7e-14 82.8 50 84.0
Nitab4.5_0000990g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.7e-14 82.8 44 88.6
Nitab4.5_0000391g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.2e-14 82.4 49 83.7
Nitab4.5_0000677g0160 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.5e-13 79.0 95 52.6
Nitab4.5_0001771g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.5e-13 79.0 73 58.9
Nitab4.5_0000662g0090 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.2e-13 78.6 51 72.5
Nitab4.5_0013466g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.1e-12 75.9 59 66.1
Nitab4.5_0002655g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.1e-12 74.3 46 76.1
Nitab4.5_0003182g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.4e-11 73.2 46 71.7
Nitab4.5_0002352g0090 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-11 72.8 46 73.9
Nitab4.5_0004940g0100 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.7e-11 70.9 38 86.8
Nitab4.5_0001843g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 8.8e-11 70.5 95 49.5
Nitab4.5_0001425g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.5e-10 69.7 44 81.8
Nitab4.5_0004066g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.0e-10 69.3 77 53.2
Nitab4.5_0014940g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.5e-10 68.9 39 82.1
Nitab4.5_0000125g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.3e-09 66.6 38 84.2
Nitab4.5_0000902g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.2e-09 65.9 38 78.9
Nitab4.5_0000823g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-08 62.8 46 67.4
Nitab4.5_0003966g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.1e-08 61.6 36 86.1
Nitab4.5_0001114g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.9e-08 60.8 59 55.9
Nitab4.5_0001439g0130 Nicotiana tabacum HOM05D002262 ORTHO05D016873 5.9e-07 57.8 38 73.7
Nitab4.5_0000665g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.0e-06 57.0 34 88.2


User provided reference genes

Program Settings