Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.9e-236 822.4 765 100.0
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 1.3e-212 743.8 765 94.4
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 1.0e-156 558.1 748 64.2
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 1.7e-156 557.4 763 62.5
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 4.6e-149 532.7 759 67.3
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 2.5e-147 526.9 740 68.1
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 1.3e-122 444.9 751 72.3
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 6.7e-108 396.0 759 54.5
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 6.9e-105 386.0 748 67.5
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 6.1e-101 372.9 759 65.0
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.8e-98 363.2 759 55.7
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 6.3e-98 362.8 749 54.9
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.4e-97 361.7 748 59.6
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 4.1e-97 360.1 753 53.9
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 5.3e-97 359.8 723 61.4
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 1.2e-96 358.6 736 64.5
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 1.2e-96 358.6 757 64.6
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.6e-96 357.5 764 50.8
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.9e-95 354.0 747 59.6
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.9e-94 351.3 748 57.2
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 9.4e-94 349.0 743 60.2
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 2.7e-93 347.4 747 54.2
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 1.4e-92 345.1 750 59.3
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 1.4e-92 345.1 722 62.6
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 4.4e-91 340.1 748 59.1
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 2.8e-90 337.4 756 66.8
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 8.2e-90 335.9 749 61.1
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 9.1e-89 332.4 762 57.5
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 2.0e-88 331.3 740 62.3
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 1.0e-87 328.9 759 55.9
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 1.8e-84 318.2 766 56.9
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 2.3e-84 317.8 750 60.0
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 5.2e-84 316.6 757 57.5
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 7.5e-83 312.8 760 58.8
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 1.3e-82 312.0 767 59.2
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 1.4e-81 308.5 728 55.6
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 3.1e-81 307.4 761 62.0
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 2.7e-80 304.3 777 45.8
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 3.8e-79 300.4 759 52.2
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 1.6e-77 295.0 744 62.4
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 6.1e-77 293.1 753 59.1
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 8.8e-76 289.3 751 59.9
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 1.7e-74 285.0 758 51.8
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 3.7e-74 283.9 727 54.3
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 1.7e-71 275.0 743 57.1
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 7.2e-70 269.6 767 62.7
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 9.5e-70 269.2 738 52.8
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 1.2e-69 268.9 770 56.9
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 3.6e-69 267.3 745 54.2
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 2.3e-68 264.6 768 54.7
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 2.3e-68 264.6 748 49.3
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 4.0e-68 263.8 750 57.3
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 2.2e-66 258.1 485 54.6
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 2.8e-66 257.7 751 56.9
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 6.3e-66 256.5 753 59.1
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 6.3e-66 256.5 758 57.9
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 7.0e-65 253.1 757 57.2
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 7.8e-64 249.6 768 55.1
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 1.7e-63 248.4 724 53.0
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 1.1e-62 245.7 747 54.2
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 1.9e-62 245.0 736 52.3
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 5.6e-62 243.4 754 50.1
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 4.7e-61 240.4 481 60.9
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 6.1e-61 240.0 750 53.6
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 3.0e-60 237.7 748 54.5
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 6.8e-60 236.5 748 56.6
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 6.8e-60 236.5 766 56.1
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 7.5e-59 233.0 759 56.3
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 2.9e-58 231.1 458 48.9
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.4e-57 228.8 768 52.0
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 1.0e-55 222.6 753 55.8
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 3.0e-55 221.1 745 48.2
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 3.9e-55 220.7 740 56.5
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 3.9e-55 220.7 749 53.3
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 1.1e-54 219.2 732 52.5
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 1.1e-54 219.2 724 59.3
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 3.6e-53 214.2 478 45.8
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 3.6e-53 214.2 478 45.8
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 2.3e-52 211.5 480 51.5
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 2.0e-51 208.4 756 49.5
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 3.4e-51 207.6 738 59.8
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 9.8e-51 206.1 476 45.4
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 1.3e-50 205.7 734 56.9
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 1.7e-50 205.3 765 51.1
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 1.6e-48 198.7 758 53.3
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 7.8e-48 196.4 479 53.2
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 1.1e-46 192.6 399 49.9
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 1.5e-43 182.2 742 45.4
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 1.7e-42 178.7 449 44.3
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 2.2e-42 178.3 338 65.7
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 1.4e-41 175.6 726 44.8
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 4.1e-41 174.1 711 56.8
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 9.2e-41 172.9 755 54.3
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 3.0e-39 167.9 707 56.4
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 1.1e-36 159.5 765 47.3
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 8.9e-36 156.4 742 47.4
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 8.4e-34 149.8 756 47.5
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 3.5e-32 144.4 188 62.8
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 7.1e-25 120.2 156 49.4
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 7.1e-25 120.2 125 56.0
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 1.1e-20 106.3 724 46.5
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 3.1e-20 104.8 750 44.9
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.4e-17 95.1 249 54.6
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 4.2e-17 94.4 368 31.0
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.8e-15 89.0 437 30.7
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 2.3e-15 88.6 139 46.0
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 8.7e-15 86.7 113 49.6
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.3e-13 82.8 83 61.4
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 2.8e-13 81.6 124 44.4
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 1.4e-12 79.3 465 39.4
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 5.5e-09 67.4 730 49.7
CBR_g53711 Chara braunii HOM05D006421 ORTHO05D134251 9.6e-06 56.6 121 38.0


User provided reference genes

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