Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 1.6e-73 279.6 174 100.0
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 5.5e-66 254.6 174 94.3
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 1.5e-52 209.9 176 84.7
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 2.7e-49 199.1 179 83.8
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 1.0e-48 197.2 179 83.2
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 1.8e-48 196.4 176 81.2
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 1.0e-40 170.6 170 77.6
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 1.6e-28 130.2 172 59.3
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 4.5e-28 128.6 177 55.9
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 1.0e-27 127.5 175 63.4
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 1.7e-27 126.7 178 60.1
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 1.7e-27 126.7 178 60.1
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 2.3e-27 126.3 182 58.8
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 5.0e-27 125.2 177 57.6
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 5.0e-27 125.2 170 55.9
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 8.6e-27 124.4 180 62.2
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 2.5e-26 122.9 181 63.0
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 2.5e-26 122.9 174 63.8
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 5.5e-26 121.7 177 57.1
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 1.6e-25 120.2 183 59.6
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 2.1e-25 119.8 181 60.2
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 2.1e-25 119.8 177 62.1
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 4.7e-25 118.6 183 47.5
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 2.3e-24 116.3 173 53.8
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 2.3e-24 116.3 183 55.7
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 5.2e-24 115.2 181 47.0
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 5.2e-24 115.2 179 59.8
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 6.8e-24 114.8 173 53.8
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 6.8e-24 114.8 175 60.6
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 1.5e-23 113.6 178 51.7
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 2.6e-23 112.8 181 60.8
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 2.6e-23 112.8 175 57.1
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 7.5e-23 111.3 171 56.7
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 9.8e-23 110.9 162 61.7
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 9.8e-23 110.9 177 59.9
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 9.8e-23 110.9 173 61.8
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 1.3e-22 110.5 184 60.3
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 1.7e-22 110.2 178 60.1
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 2.8e-22 109.4 177 59.3
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 2.8e-22 109.4 157 61.8
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.1e-21 107.5 174 59.2
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 1.1e-21 107.5 174 54.0
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 1.1e-21 107.5 173 51.4
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 1.4e-21 107.1 174 60.9
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 1.4e-21 107.1 131 71.8
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.8e-21 106.7 149 47.0
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 1.8e-21 106.7 175 55.4
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 1.8e-21 106.7 179 56.4
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 2.4e-21 106.3 179 55.3
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 3.1e-21 105.9 120 55.0
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 3.1e-21 105.9 176 40.9
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 4.1e-21 105.5 176 44.3
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 5.4e-21 105.1 179 58.1
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 7.0e-21 104.8 173 59.5
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 9.2e-21 104.4 174 53.4
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 2.0e-20 103.2 174 58.0
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.7e-20 102.8 171 40.4
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 2.7e-20 102.8 171 40.4
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 3.5e-20 102.4 178 47.8
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 4.5e-20 102.1 178 50.6
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 7.8e-20 101.3 170 58.2
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.7e-19 100.1 170 58.2
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.7e-19 100.1 159 58.5
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 1.7e-19 100.1 166 63.9
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 2.3e-19 99.8 173 57.8
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 2.9e-19 99.4 172 53.5
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.1e-18 97.4 143 46.9
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.5e-18 97.1 176 55.7
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.5e-18 97.1 176 55.7
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.9e-18 96.7 186 54.3
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 3.3e-18 95.9 173 58.4
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 4.3e-18 95.5 122 50.8
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 4.3e-18 95.5 182 51.1
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 4.3e-18 95.5 174 58.6
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 5.6e-18 95.1 174 55.2
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 1.2e-17 94.0 171 40.4
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 1.2e-17 94.0 171 39.8
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 1.2e-17 94.0 171 39.8
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 1.2e-17 94.0 177 48.6
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 1.6e-17 93.6 174 58.6
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 2.1e-17 93.2 176 56.8
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 2.1e-17 93.2 172 54.7
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 2.1e-17 93.2 143 55.9
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.8e-17 92.8 179 42.5
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 2.8e-17 92.8 168 57.1
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.6e-17 92.4 179 46.9
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 3.6e-17 92.4 167 38.9
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 4.7e-17 92.0 177 53.1
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 6.1e-17 91.7 179 41.9
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 1.8e-16 90.1 171 39.2
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 1.8e-16 90.1 131 67.2
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 1.8e-16 90.1 175 48.6
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 3.0e-16 89.4 129 46.5
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 3.0e-16 89.4 129 46.5
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 3.0e-16 89.4 171 38.0
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 3.0e-16 89.4 129 46.5
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 3.0e-16 89.4 173 56.6
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 3.0e-16 89.4 143 55.9
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 4.0e-16 89.0 170 38.8
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 4.0e-16 89.0 170 38.8
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 5.2e-16 88.6 176 38.1
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 5.2e-16 88.6 179 42.5
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 8.9e-16 87.8 129 45.7
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 1.5e-15 87.0 129 45.7
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 2.6e-15 86.3 173 44.5
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 3.4e-15 85.9 171 56.1
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 4.4e-15 85.5 176 54.0
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 4.4e-15 85.5 175 56.0
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 4.4e-15 85.5 129 45.0
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 9.8e-15 84.3 177 54.8
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 9.8e-15 84.3 153 58.2
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 1.3e-14 84.0 129 43.4
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 1.3e-14 84.0 172 54.7
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.7e-14 83.6 177 39.5
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 2.2e-14 83.2 164 38.4
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 2.2e-14 83.2 171 53.8
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 2.2e-14 83.2 89 52.8
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 3.7e-14 82.4 134 44.0
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 4.9e-14 82.0 89 51.7
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 4.9e-14 82.0 170 51.2
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 4.9e-14 82.0 87 86.2
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 6.4e-14 81.6 87 51.7
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 5.4e-13 78.6 169 52.7
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 1.2e-12 77.4 132 41.7
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 7.8e-12 74.7 129 41.9
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.0e-11 74.3 130 40.8
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 3.9e-11 72.4 139 41.0
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 5.0e-11 72.0 118 45.8
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 6.6e-11 71.6 136 53.7
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 4.3e-10 68.9 184 47.3
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 1.2e-09 67.4 246 37.4
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 2.1e-09 66.6 115 43.5
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 1.1e-08 64.3 171 31.6
SEGI_18714 Sequoiadendron giganteum HOM05D005335 ORTHO05D006472 5.8e-07 58.5 92 67.4
ECA246G0037 Erigeron canadensis HOM05D005335 ORTHO05D006472 9.8e-07 57.8 180 40.0
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.3e-06 57.4 171 45.0


User provided reference genes

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