Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 5.7e-80 300.8 150 100.0
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 5.0e-76 287.7 148 93.9
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 1.5e-75 286.2 148 94.6
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 1.6e-74 282.7 148 93.2
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 1.1e-73 280.0 148 91.9
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 3.1e-73 278.5 148 91.2
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 3.4e-72 275.0 148 91.2
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 5.8e-72 274.2 148 89.2
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 2.4e-70 268.9 148 86.5
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 5.4e-70 267.7 148 86.5
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 9.2e-70 266.9 148 85.1
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 9.2e-70 266.9 148 85.1
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 1.2e-69 266.5 148 85.1
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 1.2e-69 266.5 148 85.1
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.2e-69 266.5 148 86.5
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 1.2e-69 266.5 148 84.5
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 1.2e-69 266.5 148 84.5
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.6e-69 266.2 147 86.4
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.6e-69 266.2 147 86.4
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 2.7e-69 265.4 148 85.1
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 3.5e-69 265.0 148 85.1
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 3.5e-69 265.0 148 83.8
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 4.6e-69 264.6 148 85.1
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 2.3e-68 262.3 147 84.4
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 3.0e-68 261.9 147 83.7
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 3.9e-68 261.5 147 85.0
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 5.0e-68 261.2 148 83.1
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 5.0e-68 261.2 148 84.5
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 8.6e-68 260.4 148 81.8
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 8.6e-68 260.4 148 83.8
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 1.1e-67 260.0 148 83.8
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 3.3e-67 258.5 148 83.1
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 5.6e-67 257.7 148 82.4
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 7.3e-67 257.3 148 80.4
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 7.3e-67 257.3 148 81.1
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 9.5e-67 256.9 148 82.4
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 1.6e-66 256.1 148 82.4
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 2.8e-66 255.4 148 79.7
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 3.6e-66 255.0 148 81.8
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 3.6e-66 255.0 148 78.4
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 3.6e-66 255.0 148 81.8
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 3.6e-66 255.0 148 81.1
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 1.4e-65 253.1 148 78.4
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 1.8e-65 252.7 148 81.1
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 2.3e-65 252.3 148 82.4
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 3.1e-65 251.9 148 81.1
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 3.1e-65 251.9 148 79.7
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 4.0e-65 251.5 147 79.6
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 8.9e-65 250.4 148 80.4
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 1.2e-64 250.0 148 81.8
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 1.5e-64 249.6 148 79.7
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 2.0e-64 249.2 148 81.8
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 2.0e-64 249.2 148 81.8
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 2.0e-64 249.2 148 81.8
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 3.4e-64 248.4 148 79.1
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 3.4e-64 248.4 148 79.7
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 3.4e-64 248.4 148 78.4
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 5.8e-64 247.7 148 77.7
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 5.8e-64 247.7 148 79.7
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 9.9e-64 246.9 148 77.7
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 9.9e-64 246.9 148 79.7
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-63 246.5 148 81.1
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 1.3e-63 246.5 148 78.4
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 1.3e-63 246.5 148 79.1
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 1.7e-63 246.1 148 79.7
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 1.7e-63 246.1 148 79.7
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 1.7e-63 246.1 148 79.7
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 2.9e-63 245.4 148 77.7
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 2.9e-63 245.4 144 80.6
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 3.7e-63 245.0 148 79.7
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 3.7e-63 245.0 148 79.7
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 4.9e-63 244.6 148 78.4
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 6.4e-63 244.2 148 78.4
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 8.3e-63 243.8 148 76.4
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.1e-62 243.4 148 76.4
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 1.9e-62 242.7 148 77.0
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.9e-62 242.7 148 78.4
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 2.4e-62 242.3 148 75.7
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 4.1e-62 241.5 163 75.5
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 5.4e-62 241.1 148 77.0
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 7.1e-62 240.7 148 78.4
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 9.2e-62 240.4 148 75.0
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 1.2e-61 240.0 145 79.3
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 1.6e-61 239.6 148 78.4
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.1e-61 239.2 163 75.5
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 2.1e-61 239.2 168 69.6
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.7e-61 238.8 145 78.6
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 3.5e-61 238.4 168 69.0
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 4.6e-61 238.0 148 77.7
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 7.8e-61 237.3 145 77.9
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 7.8e-61 237.3 147 76.9
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 1.3e-60 236.5 148 76.4
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 1.3e-60 236.5 148 77.7
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 2.3e-60 235.7 149 75.2
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 1.5e-59 233.0 133 83.5
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 2.8e-58 228.8 138 79.0
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 3.1e-57 225.3 148 70.9
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 4.0e-57 224.9 136 78.7
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 2.0e-56 222.6 148 72.3
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 1.9e-51 206.1 147 68.7
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 2.1e-50 202.6 112 85.7
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 8.1e-50 200.7 118 79.7
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 1.8e-49 199.5 148 63.5
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 1.2e-48 196.8 173 58.4
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 1.4e-46 189.9 144 64.6
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 4.6e-45 184.9 149 63.1
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 6.2e-42 174.5 149 58.4
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.4e-41 173.3 105 74.3
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 1.2e-40 170.2 136 63.2
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 3.4e-40 168.7 145 60.7
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.7e-39 166.4 149 56.4
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 4.9e-39 164.9 149 56.4
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 8.4e-39 164.1 149 54.4
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-38 163.7 149 54.4
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-38 163.3 149 53.7
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 2.4e-38 162.5 149 53.0
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 2.4e-38 162.5 149 53.7
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 3.2e-38 162.2 149 55.0
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 5.4e-38 161.4 149 55.0
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 7.1e-38 161.0 149 55.0
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 7.1e-38 161.0 151 57.0
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 9.3e-38 160.6 103 74.8
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 6.0e-37 157.9 149 53.0
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 1.0e-36 157.1 149 54.4
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 1.0e-36 157.1 149 54.4
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 1.8e-36 156.4 103 68.9
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-35 153.7 149 53.7
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 7.4e-35 151.0 152 55.3
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 1.7e-31 139.8 149 50.3
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.1e-30 137.1 149 49.7
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 9.3e-30 134.0 149 48.3
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 1.9e-27 126.3 117 52.1
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 3.7e-26 122.1 109 53.2
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 8.2e-26 120.9 79 67.1
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 2.0e-24 116.3 149 46.3
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 1.9e-22 109.8 78 59.0
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 4.2e-14 82.0 175 32.0
MBI02_g02172_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 3.6e-13 79.0 45 77.8
SGA_v2.0_scaffold72G24132 Striga asiatica HOM05D004164 ORTHO05D004891 1.1e-11 73.9 46 76.1
SGA_v2.0_scaffold47G17582 Striga asiatica HOM05D004164 ORTHO05D004891 1.5e-11 73.6 50 72.0
SGA_v2.0_scaffold48G17919 Striga asiatica HOM05D004164 ORTHO05D004891 4.3e-11 72.0 46 76.1
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 9.7e-11 70.9 59 57.6
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.4e-09 66.2 144 29.9
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 8.5e-07 57.8 140 27.9
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 5.5e-06 55.1 157 27.4


User provided reference genes

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