Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002397g0060 Nicotiana tabacum HOM05D009153 ORTHO05D011903 2.8e-38 161.4 77 100.0
Nitab4.5_0007528g0020 Nicotiana tabacum HOM05D009153 ORTHO05D011903 1.9e-26 122.1 62 95.2
Nitab4.5_0000576g0050 Nicotiana tabacum HOM05D009153 ORTHO05D011903 4.6e-25 117.5 66 84.8
Nitab4.5_0000649g0160 Nicotiana tabacum HOM05D009153 ORTHO05D011903 7.9e-25 116.7 66 84.8
Nitab4.5_0001558g0020 Nicotiana tabacum HOM05D009153 ORTHO05D011903 5.7e-23 110.5 66 77.3
Nitab4.5_0000797g0080 Nicotiana tabacum HOM05D009153 ORTHO05D011903 9.6e-23 109.8 72 76.4
Nitab4.5_0008296g0040 Nicotiana tabacum HOM05D009153 ORTHO05D011903 9.6e-23 109.8 75 69.3
Nitab4.5_0000797g0070 Nicotiana tabacum HOM05D009153 ORTHO05D011903 1.3e-22 109.4 63 82.5
Nitab4.5_0004303g0040 Nicotiana tabacum HOM05D004750 ORTHO05D006207 8.2e-22 106.7 57 91.2
Nitab4.5_0000797g0060 Nicotiana tabacum HOM05D009153 ORTHO05D011903 1.8e-21 105.5 66 80.3
Nitab4.5_0004958g0030 Nicotiana tabacum HOM05D009153 ORTHO05D011903 3.1e-21 104.8 61 83.6
Nitab4.5_0004557g0100 Nicotiana tabacum HOM05D009153 ORTHO05D011903 2.6e-20 101.7 69 72.5
Nitab4.5_0000759g0140 Nicotiana tabacum HOM05D009153 ORTHO05D011903 3.4e-20 101.3 56 87.5
Nitab4.5_0000762g0040 Nicotiana tabacum HOM05D009153 ORTHO05D011903 7.6e-20 100.1 57 82.5
Nitab4.5_0005135g0070 Nicotiana tabacum HOM05D009153 ORTHO05D011903 1.9e-18 95.5 61 73.8
Nitab4.5_0000461g0060 Nicotiana tabacum HOM05D009153 ORTHO05D011903 4.2e-18 94.4 58 75.9
Nitab4.5_0000569g0080 Nicotiana tabacum HOM05D009153 ORTHO05D002765 5.5e-18 94.0 55 83.6
Nitab4.5_0000904g0120 Nicotiana tabacum HOM05D009153 ORTHO05D011903 1.0e-16 89.7 55 81.8
Nitab4.5_0001230g0070 Nicotiana tabacum HOM05D009153 ORTHO05D011903 3.0e-16 88.2 74 60.8
Nitab4.5_0000027g0260 Nicotiana tabacum HOM05D009153 ORTHO05D000013 9.7e-15 83.2 46 87.0
Nitab4.5_0008487g0060 Nicotiana tabacum HOM05D009153 ORTHO05D011903 2.8e-14 81.6 54 79.6
Nitab4.5_0000073g0520 Nicotiana tabacum HOM05D009153 ORTHO05D002765 3.7e-14 81.3 46 80.4
Nitab4.5_0000688g0080 Nicotiana tabacum HOM05D009153 ORTHO05D011903 5.3e-13 77.4 53 75.5
Nitab4.5_0001708g0050 Nicotiana tabacum HOM05D009153 ORTHO05D011903 1.5e-12 75.9 48 79.2
Nitab4.5_0006703g0020 Nicotiana tabacum HOM05D009153 ORTHO05D011903 2.0e-12 75.5 44 81.8
Nitab4.5_0000867g0030 Nicotiana tabacum HOM05D009153 ORTHO05D011903 2.5e-10 68.6 41 80.5
Peaxi162Scf00827g00217 Petunia axillaris HOM05D009153 ORTHO05D011903 2.5e-10 68.6 57 59.6
Nitab4.5_0004238g0070 Nicotiana tabacum HOM05D009153 ORTHO05D002765 1.4e-08 62.8 59 52.5
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 1.8e-08 62.4 55 56.4
Nitab4.5_0005474g0070 Nicotiana tabacum HOM05D006864 ORTHO05D011903 2.3e-08 62.0 70 47.1
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 5.1e-08 60.8 55 54.5
Nitab4.5_0010494g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.7e-08 60.5 66 43.9
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-07 59.7 51 51.0
Nitab4.5_0000890g0120 Nicotiana tabacum HOM05D006864 ORTHO05D011903 1.5e-07 59.3 62 45.2
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-07 59.3 68 42.6
Nitab4.5_0000021g0980 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-07 58.9 50 52.0
Nitab4.5_0002993g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.0e-07 58.9 58 50.0
Nitab4.5_0012303g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.0e-07 58.9 58 48.3
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.6e-07 58.5 50 48.0
Nitab4.5_0002002g0100 Nicotiana tabacum HOM05D007248 ORTHO05D000013 3.3e-07 58.2 44 70.5
Nitab4.5_0003114g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.3e-07 58.2 55 49.1
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.3e-07 58.2 49 53.1
Nitab4.5_0000227g0040 Nicotiana tabacum HOM05D006864 ORTHO05D011903 4.4e-07 57.8 63 41.3
Nitab4.5_0010319g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.4e-07 57.8 61 47.5
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.4e-07 57.0 49 51.0
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.4e-07 57.0 62 45.2
Nitab4.5_0024513g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.4e-07 57.0 68 42.6
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.7e-07 56.6 46 58.7
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-06 55.8 64 48.4
Nitab4.5_0002944g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-06 55.8 50 50.0
Nitab4.5_0003869g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-06 55.8 57 45.6
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.7e-06 55.8 58 46.6
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.7e-06 55.8 68 42.6
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.7e-06 55.8 61 47.5
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.2e-06 55.5 61 45.9
Nitab4.5_0005092g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.2e-06 55.5 55 47.3
Nitab4.5_0008036g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.2e-06 55.5 68 44.1
ATR0727G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 2.8e-06 55.1 50 46.0
CANSAT21G1876 Cannabis sativa HOM05D000017 ORTHO05D000013 2.8e-06 55.1 50 46.0
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.7e-06 54.7 57 49.1
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.7e-06 54.7 57 54.4
Nitab4.5_0007137g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.7e-06 54.7 49 51.0
Nitab4.5_0000980g0130 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.8e-06 54.3 51 49.0
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.8e-06 54.3 46 50.0
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.8e-06 54.3 78 41.0
Nitab4.5_0004697g0110 Nicotiana tabacum HOM05D006864 ORTHO05D000013 4.8e-06 54.3 64 42.2
CANSAT56G3775 Cannabis sativa HOM05D000017 ORTHO05D002765 6.3e-06 53.9 70 40.0
Nitab4.5_0000692g0140 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.3e-06 53.9 59 44.1
Nitab4.5_0001030g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.3e-06 53.9 58 44.8
Nitab4.5_0004143g0050 Nicotiana tabacum HOM05D007248 ORTHO05D000013 6.3e-06 53.9 51 47.1
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.3e-06 53.9 58 46.6
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.2e-06 53.5 64 46.9
Nitab4.5_0009017g0010 Nicotiana tabacum HOM05D000017 ORTHO05D002765 8.2e-06 53.5 68 42.6


User provided reference genes

Program Settings