Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002393g0010 Nicotiana tabacum HOM05D004019 ORTHO05D005136 4.7e-211 737.6 385 100.0
Solyc08g068010.2 Solanum lycopersicum HOM05D004019 ORTHO05D005136 2.2e-200 702.2 384 96.1
Sopen08g021930 Solanum pennellii HOM05D004019 ORTHO05D005136 6.4e-200 700.7 384 96.4
Dinv14207 Davidia involucrata HOM05D004019 ORTHO05D005136 1.5e-185 652.9 385 83.4
Medtr3g108360 Medicago truncatula HOM05D004019 ORTHO05D005136 2.4e-183 645.6 383 82.2
COL.COLO4_18737 Corchorus olitorius HOM05D004019 ORTHO05D005136 3.2e-183 645.2 385 82.1
Ca_15687_v3 Cicer arietinum L. HOM05D004019 ORTHO05D005136 4.2e-183 644.8 383 83.0
PGR031G1071 Punica granatum HOM05D004019 ORTHO05D005136 7.1e-183 644.0 385 86.2
Dinv30236 Davidia involucrata HOM05D004019 ORTHO05D005136 9.3e-183 643.7 385 82.3
Phvul.009G099400 Phaseolus vulgaris HOM05D004019 ORTHO05D005136 1.6e-182 642.9 384 82.0
Ciclev10007225m.g Citrus clementina HOM05D004019 ORTHO05D005136 2.7e-182 642.1 385 82.3
Aqoxy7G01749 Aquilegia oxysepala HOM05D004019 ORTHO05D005136 3.5e-182 641.7 384 81.5
Actinidia13300 Actinidia chinensis HOM05D004019 ORTHO05D005136 7.9e-182 640.6 384 82.0
Lj1g0020850 Lotus japonicus HOM05D004019 ORTHO05D005136 7.9e-182 640.6 383 81.7
Prupe.1G464500 Prunus persica HOM05D004019 ORTHO05D005136 7.9e-182 640.6 385 80.8
Glyma.06G074700 Glycine max HOM05D004019 ORTHO05D005136 1.0e-181 640.2 384 82.0
Thecc.09G037700 Theobroma cacao HOM05D004019 ORTHO05D005136 1.0e-181 640.2 385 82.1
GSVIVG01035749001 Vitis vinifera HOM05D004019 ORTHO05D005136 1.0e-181 640.2 385 82.9
Nn8g39221 Nelumbo nucifera HOM05D004019 ORTHO05D005136 3.0e-181 638.6 385 81.8
arahy.Tifrunner.gnm1.ann1.WYF2AC Arachis hypogaea HOM05D004019 ORTHO05D005136 3.9e-181 638.3 384 81.5
Migut.A00257 Erythranthe guttata HOM05D004019 ORTHO05D005136 3.9e-181 638.3 384 82.6
MSTRG.25887 Avicennia marina HOM05D004019 ORTHO05D005136 6.7e-181 637.5 384 81.2
Gohir.A05G049350 Gossypium hirsutum HOM05D004019 ORTHO05D005136 1.1e-180 636.7 385 81.8
Lalb_Chr11g0064021 Lupinus albus HOM05D004019 ORTHO05D005136 1.9e-180 636.0 384 80.5
Atru.chr7.2305 Acer truncatum HOM05D004019 ORTHO05D005136 4.3e-180 634.8 385 80.5
Gohir.D05G051300 Gossypium hirsutum HOM05D004019 ORTHO05D005136 7.4e-180 634.0 385 81.6
Gorai.009G053000 Gossypium raimondii HOM05D004019 ORTHO05D005136 7.4e-180 634.0 385 81.6
Lj8C607G10 Lonicera japonica HOM05D004019 ORTHO05D005136 7.4e-180 634.0 385 81.3
Potri.006G244900 Populus trichocarpa HOM05D004019 ORTHO05D005136 1.3e-179 633.3 385 80.8
FAN20G1524 Fragaria x ananassa HOM05D004019 ORTHO05D005136 2.8e-179 632.1 385 80.5
RcHm_v2.0_Chr6g0312581 Rosa chinensis HOM05D004019 ORTHO05D005136 3.6e-179 631.7 385 80.3
MD15G1113500 Malus domestica HOM05D004019 ORTHO05D005136 4.8e-179 631.3 385 84.4
VMungo1309G1295 Vigna mungo HOM05D004019 ORTHO05D005136 6.2e-179 630.9 385 80.5
Rhsim02G0185100 Rhododendron simsii HOM05D004019 ORTHO05D005136 1.4e-178 629.8 386 85.2
CSS0034867 Camellia sinensis var. sinensis HOM05D004019 ORTHO05D005136 5.3e-178 627.9 385 82.3
CiPaw.07G216600 Carya illinoinensis HOM05D004019 ORTHO05D005136 6.9e-178 627.5 386 81.3
FvH4_2g30330 Fragaria vesca HOM05D004019 ORTHO05D005136 9.0e-178 627.1 387 81.4
Psat5g025600 Pisum sativum HOM05D004019 ORTHO05D005136 7.6e-177 624.0 383 80.2
TWI63G0705 Tripterygium wilfordii HOM05D004019 ORTHO05D005136 1.3e-176 623.2 385 80.0
TAR624G1332 Trochodendron aralioides HOM05D004019 ORTHO05D005136 2.2e-176 622.5 385 80.3
CANSAT25G1365 Cannabis sativa HOM05D004019 ORTHO05D005136 1.1e-175 620.2 385 79.2
arahy.Tifrunner.gnm1.ann1.P4KF2E Arachis hypogaea HOM05D004019 ORTHO05D005136 2.4e-175 619.0 375 81.6
FAN24G2881 Fragaria x ananassa HOM05D004019 ORTHO05D005136 3.2e-175 618.6 398 79.1
Cc08_g08140 Coffea canephora HOM05D004019 ORTHO05D005136 7.1e-175 617.5 385 79.7
CANSAT56G4370 Cannabis sativa HOM05D004019 ORTHO05D005136 6.0e-174 614.4 386 79.0
ECA246G1280 Erigeron canadensis HOM05D004019 ORTHO05D005136 5.1e-173 611.3 384 76.6
TPR.G12417 Trifolium pratense HOM05D004019 ORTHO05D005136 6.7e-173 610.9 380 77.6
CsaV3_3G046830 Cucumis sativus L. HOM05D004019 ORTHO05D005136 2.5e-172 609.0 386 76.7
HanXRQChr17g0539391 Helianthus annuus HOM05D004019 ORTHO05D005136 2.5e-172 609.0 384 76.8
EL10Ac2g02527 Beta vulgaris HOM05D004019 ORTHO05D005136 1.8e-170 602.8 384 77.3
Eucgr.C01572 Eucalyptus grandis HOM05D004019 ORTHO05D005136 1.5e-169 599.7 384 77.3
QL12p030977 Quercus lobata HOM05D004019 ORTHO05D005136 3.2e-167 592.0 363 80.4
vmacro11105 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 1.3e-165 586.6 381 81.6
Sc09g0008920 Simmondsia chinensis HOM05D004019 ORTHO05D005136 2.3e-165 585.9 385 73.2
Sed0026885 Sechium edule HOM05D004019 ORTHO05D005136 6.7e-165 584.3 385 74.0
AUR62024824 Chenopodium quinoa HOM05D004019 ORTHO05D005136 8.7e-165 583.9 384 75.0
AUR62032391 Chenopodium quinoa HOM05D004019 ORTHO05D005136 2.5e-164 582.4 384 74.2
Lsat_1_v5_gn_3_27801 Lactuca sativa HOM05D004019 ORTHO05D005136 2.1e-163 579.3 383 73.9
PSO063G5962 Papaver somniferum HOM05D004019 ORTHO05D005136 4.8e-163 578.2 384 77.6
PSO782G0289 Papaver somniferum HOM05D004019 ORTHO05D005136 6.3e-163 577.8 384 77.6
ATR1120G055 Amborella trichopoda HOM05D004019 ORTHO05D005136 1.8e-162 576.2 371 76.5
MELO3C003655.2 Cucumis melo HOM05D004019 ORTHO05D005136 5.0e-160 568.2 454 64.3
Sabra06G0191800 Salix brachista HOM05D004019 ORTHO05D005136 1.1e-159 567.0 364 76.9
unitig_747.g21875 Utricularia gibba HOM05D004019 ORTHO05D005136 3.2e-159 565.5 385 73.0
Cpa.g.sc205.26 Carica papaya HOM05D004019 ORTHO05D005136 2.1e-158 562.8 400 71.8
THA.LOC104803772 Tarenaya hassleriana HOM05D004019 ORTHO05D005136 4.6e-158 561.6 385 71.4
Carub.0004s0550 Capsella rubella HOM05D004019 ORTHO05D005136 6.7e-157 557.8 385 70.9
CDE10G0547 Ceratophyllum demersum HOM05D004019 ORTHO05D005136 4.3e-156 555.1 383 69.7
AT2G25730 Arabidopsis thaliana HOM05D004019 ORTHO05D005136 4.8e-155 551.6 385 69.4
CARHR115530 Cardamine hirsuta HOM05D004019 ORTHO05D005136 6.3e-155 551.2 385 70.1
AL4G17350 Arabidopsis lyrata HOM05D004019 ORTHO05D005136 1.1e-154 550.4 385 69.4
Sp4g05330 Schrenkiella parvula HOM05D004019 ORTHO05D005136 1.4e-154 550.1 385 69.6
Thhalv10000005m.g Eutrema salsugineum HOM05D004019 ORTHO05D005136 1.8e-154 549.7 385 70.4
Aa31LG5G9950 Aethionema arabicum HOM05D004019 ORTHO05D005136 2.5e-151 539.3 406 66.5
A03p27040 Brassica napus HOM05D004019 ORTHO05D005136 2.5e-151 539.3 385 68.6
C03p32450 Brassica napus HOM05D004019 ORTHO05D005136 2.7e-150 535.8 385 68.3
BraA03t11915Z Brassica rapa HOM05D004019 ORTHO05D005136 2.8e-147 525.8 409 64.5
SGA_v2.0_scaffold280G46835 Striga asiatica HOM05D004019 ORTHO05D005136 4.8e-147 525.0 361 74.0
BolC3t15586H Brassica oleracea HOM05D004019 ORTHO05D005136 3.1e-146 522.3 409 64.3
vmacro08818 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 6.5e-144 514.6 348 79.0
Peaxi162Scf00105g00818 Petunia axillaris HOM05D004019 ORTHO05D005136 7.9e-142 507.7 391 72.6
Pp3c19_2530 Physcomitrium patens HOM05D004019 ORTHO05D005136 4.5e-137 491.9 383 62.7
Oeu063261.5 Olea europaea HOM05D004019 ORTHO05D005136 8.2e-131 471.1 386 65.3
SMO172G0089 Selaginella moellendorffii HOM05D004019 ORTHO05D005136 9.1e-130 467.6 374 60.4
Mapoly0049s0060 Marchantia polymorpha HOM05D004019 ORTHO05D005136 2.7e-126 456.1 383 59.8
CBR_g31401 Chara braunii HOM05D004019 ORTHO05D005136 1.2e-121 440.7 385 59.2
AagrBONN_evm.TU.Sc2ySwM_340.130 Anthoceros agrestis HOM05D004019 ORTHO05D005136 1.0e-117 427.6 381 55.4
Os01g0593000 Oryza sativa ssp. japonica HOM05D004019 ORTHO05D005136 9.8e-116 421.0 264 76.9
Nitab4.5_0000250g0090 Nicotiana tabacum HOM05D004019 ORTHO05D005136 5.2e-101 372.1 180 100.0
MBI03_g19627_MAGBIO Magnolia biondii HOM05D004019 ORTHO05D005136 1.8e-93 347.1 235 71.9
Manes.03G064200 Manihot esculenta HOM05D004019 ORTHO05D005136 2.9e-91 339.7 235 70.6
Ah.12g060330 Amaranthus hybridus HOM05D004019 ORTHO05D005136 3.9e-88 329.3 180 86.1
DCAR_006256 Daucus carota HOM05D004019 ORTHO05D005136 1.1e-87 327.8 308 56.8
Nitab4.5_0000250g0100 Nicotiana tabacum HOM05D004019 ORTHO05D005136 8.1e-78 295.0 337 58.2
SEGI_29718 Sequoiadendron giganteum HOM05D004019 ORTHO05D005136 9.9e-76 288.1 158 86.1
DCAR_006257 Daucus carota HOM05D004019 ORTHO05D005136 8.4e-75 285.0 151 92.7
Ah.12g060340 Amaranthus hybridus HOM05D004019 ORTHO05D005136 7.4e-63 245.4 205 62.0
SHI11640 Sapria himalayana HOM05D004019 ORTHO05D000023 7.2e-42 175.6 172 51.7
Hma1.2p1_0140F.1_g063800 Hydrangea macrophylla HOM05D004019 ORTHO05D005136 6.1e-41 172.6 116 76.7
Zm00001eb161040 Zea mays HOM05D004019 ORTHO05D005136 3.9e-40 169.9 156 53.8
Haze_21653 Corylus avellana HOM05D004019 ORTHO05D005136 3.4e-36 156.8 133 57.9
Cfa013229 Carpinus fangiana HOM05D004019 ORTHO05D005136 1.4e-34 151.4 123 61.0
SEGI_05898 Sequoiadendron giganteum HOM05D004019 ORTHO05D005136 1.3e-30 138.3 145 49.0
HPP92_006443 Vanilla planifolia HOM05D004019 ORTHO05D005136 3.6e-25 120.2 149 43.0
vmacro11106 Vaccinium macrocarpon HOM05D005362 ORTHO05D006895 6.7e-16 89.4 55 80.0
Glyma.04G073626 Glycine max HOM05D004019 ORTHO05D005136 1.1e-13 82.0 51 78.4
Haze_21651 Corylus avellana HOM05D004019 ORTHO05D005136 1.8e-13 81.3 47 80.9
Hund02997 Selenicereus undatus HOM05D004019 ORTHO05D005136 3.1e-13 80.5 48 83.3
Nitab4.5_0005144g0040 Nicotiana tabacum HOM05D004019 ORTHO05D005136 1.6e-09 68.2 70 54.3
Potri.018G035601 Populus trichocarpa HOM05D004019 ORTHO05D005136 1.4e-08 65.1 49 59.2
PRCOL_00001920 Prasinoderma coloniale HOM05D004019 ORTHO05D005136 1.7e-06 58.2 141 32.6


User provided reference genes

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