Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 2.5e-113 412.1 212 100.0
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.2e-110 403.3 212 97.6
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 1.8e-87 326.2 210 81.0
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 7.3e-81 304.3 214 77.1
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 6.9e-79 297.7 212 77.4
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 7.4e-73 277.7 212 74.5
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 1.6e-72 276.6 212 74.5
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 8.5e-53 211.1 172 64.5
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 6.7e-50 201.4 177 65.0
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.5e-49 200.3 172 61.0
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 9.7e-49 197.6 172 62.2
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 1.3e-48 197.2 176 59.7
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 1.7e-48 196.8 213 54.9
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 3.7e-48 195.7 183 60.1
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 4.8e-48 195.3 172 61.6
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 8.2e-48 194.5 149 71.8
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 2.4e-47 193.0 172 64.0
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 4.1e-47 192.2 170 62.4
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 6.9e-47 191.4 145 70.3
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 1.2e-46 190.7 154 66.2
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 1.2e-46 190.7 149 70.5
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 2.0e-46 189.9 176 57.4
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 2.0e-46 189.9 157 63.7
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 2.6e-46 189.5 178 59.6
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 4.5e-46 188.7 149 69.1
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 5.9e-46 188.3 176 59.7
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 5.9e-46 188.3 177 58.2
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 5.9e-46 188.3 173 61.3
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 7.7e-46 188.0 145 68.3
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 7.7e-46 188.0 175 60.6
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 1.0e-45 187.6 179 60.3
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 1.3e-45 187.2 172 61.0
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.7e-45 186.8 209 53.6
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 1.7e-45 186.8 125 76.0
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 2.2e-45 186.4 114 82.5
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 2.2e-45 186.4 169 59.8
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 2.2e-45 186.4 211 53.1
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 2.9e-45 186.0 130 71.5
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 2.9e-45 186.0 130 71.5
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 8.5e-45 184.5 140 69.3
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 8.5e-45 184.5 222 50.9
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 1.1e-44 184.1 174 59.8
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 1.1e-44 184.1 180 58.9
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 1.1e-44 184.1 107 85.0
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 1.4e-44 183.7 173 59.0
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 1.9e-44 183.3 120 75.8
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 1.9e-44 183.3 210 52.4
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 2.5e-44 183.0 134 70.1
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 2.5e-44 183.0 115 79.1
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 4.2e-44 182.2 196 52.6
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 4.2e-44 182.2 131 74.8
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 5.5e-44 181.8 197 53.3
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 5.5e-44 181.8 219 52.5
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 5.5e-44 181.8 116 81.0
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 1.2e-43 180.6 210 51.0
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.2e-43 180.6 185 58.4
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.6e-43 180.3 165 63.0
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 1.6e-43 180.3 106 84.0
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 2.1e-43 179.9 211 51.7
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.1e-43 179.9 170 58.8
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 2.1e-43 179.9 117 76.9
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 2.1e-43 179.9 107 84.1
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 2.1e-43 179.9 150 64.7
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 2.7e-43 179.5 130 72.3
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 2.7e-43 179.5 116 79.3
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 3.6e-43 179.1 136 69.1
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 3.6e-43 179.1 130 72.3
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 6.1e-43 178.3 107 84.1
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 7.9e-43 177.9 158 58.9
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 7.9e-43 177.9 154 65.6
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 1.0e-42 177.6 102 83.3
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 1.0e-42 177.6 131 68.7
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 1.8e-42 176.8 160 60.0
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 2.3e-42 176.4 126 70.6
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 3.0e-42 176.0 169 59.8
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 3.0e-42 176.0 107 82.2
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 6.7e-42 174.9 114 75.4
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 8.8e-42 174.5 150 60.0
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 8.8e-42 174.5 118 73.7
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 1.1e-41 174.1 107 79.4
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 1.5e-41 173.7 123 73.2
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 1.5e-41 173.7 106 82.1
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 3.3e-41 172.6 109 78.9
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 4.4e-41 172.2 108 79.6
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 4.4e-41 172.2 120 73.3
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 7.4e-41 171.4 108 78.7
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 7.4e-41 171.4 108 78.7
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 7.4e-41 171.4 108 78.7
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 9.7e-41 171.0 108 78.7
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 9.7e-41 171.0 99 82.8
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 1.7e-40 170.2 120 74.2
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 1.7e-40 170.2 120 72.5
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 1.7e-40 170.2 117 74.4
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 6.3e-40 168.3 103 84.5
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 8.2e-40 167.9 118 72.9
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 1.8e-39 166.8 131 65.6
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.8e-39 166.8 108 75.9
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 2.0e-38 163.3 106 74.5
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 7.7e-38 161.4 106 73.6
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 1.0e-37 161.0 103 77.7
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 2.9e-37 159.5 103 76.7
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.9e-36 156.8 108 73.1
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 5.5e-36 155.2 164 54.3
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 5.2e-34 148.7 121 62.0
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 1.7e-32 143.7 106 66.0
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 2.2e-32 143.3 124 60.5
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 1.6e-30 137.1 85 78.8
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 1.9e-28 130.2 69 88.4
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 3.2e-28 129.4 127 53.5
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.2e-25 120.9 83 73.5
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 7.2e-20 101.7 134 40.3
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 5.7e-17 92.0 54 79.6
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 9.8e-17 91.3 59 79.7
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 1.8e-15 87.0 77 53.2
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 1.6e-14 84.0 44 86.4
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 1.0e-10 71.2 44 72.7
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 6.8e-10 68.6 49 67.3


User provided reference genes

Program Settings