Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002391g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.4e-50 202.6 101 100.0
Nitab4.5_0005910g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.2e-38 160.2 95 84.2
Nitab4.5_0000448g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.4e-26 122.9 89 68.5
Nitab4.5_0002025g0040 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.9e-26 122.5 96 62.5
Nitab4.5_0004100g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.2e-26 121.7 89 67.4
Nitab4.5_0003787g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.4e-26 120.2 89 67.4
Nitab4.5_0026419g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.7e-25 118.6 94 62.8
Nitab4.5_0003964g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.1e-24 114.4 89 66.3
Nitab4.5_0000992g0110 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.8e-24 113.6 94 59.6
Nitab4.5_0007294g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.8e-24 113.6 96 61.5
Nitab4.5_0003378g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.0e-23 112.5 89 67.4
Nitab4.5_0007040g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.3e-23 111.7 89 64.0
CAN.G125.10 Capsicum annuum HOM05D000010 ORTHO05D002376 1.0e-19 100.1 90 56.7
PGSC0003DMG400010936 Solanum tuberosum HOM05D002441 ORTHO05D002376 1.0e-19 100.1 88 52.3
CAN.G411.8 Capsicum annuum HOM05D002441 ORTHO05D002376 1.7e-19 99.4 92 54.3
CAN.G651.11 Capsicum annuum HOM05D002441 ORTHO05D002376 3.8e-19 98.2 89 55.1
PGSC0003DMG400010868 Solanum tuberosum HOM05D002441 ORTHO05D002376 5.0e-19 97.8 88 51.1
Nitab4.5_0001960g0070 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.5e-19 97.4 57 82.5
PGSC0003DMG400040698 Solanum tuberosum HOM05D002441 ORTHO05D002376 8.5e-19 97.1 89 50.6
CAN.G206.110 Capsicum annuum HOM05D002441 ORTHO05D002376 3.2e-18 95.1 92 53.3
CAN.G1212.9 Capsicum annuum HOM05D002441 ORTHO05D002376 6.1e-17 90.9 79 54.4
Nitab4.5_0001878g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.4e-16 89.7 90 50.0
Nitab4.5_0007533g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.4e-16 89.7 60 73.3
Nitab4.5_0000167g0330 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.3e-16 89.0 89 50.6
Nitab4.5_0003355g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.0e-16 88.6 89 52.8
CAN.G1349.13 Capsicum annuum HOM05D000586 ORTHO05D007435 6.7e-16 87.4 87 51.7
CAN.G1305.28 Capsicum annuum HOM05D002441 ORTHO05D002376 1.1e-15 86.7 83 54.2
Nitab4.5_0000928g0130 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.1e-15 86.7 79 54.4
Nitab4.5_0015899g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.1e-15 86.7 90 46.7
CAN.G426.17 Capsicum annuum HOM05D002441 ORTHO05D002376 1.5e-15 86.3 87 51.7
Nitab4.5_0000187g0280 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.6e-15 85.5 90 48.9
Nitab4.5_0000681g0200 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.4e-15 84.7 80 56.2
Nitab4.5_0011018g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.7e-15 84.3 86 51.2
Nitab4.5_0010449g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.3e-14 83.2 89 47.2
Nitab4.5_0001818g0070 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.2e-14 82.4 89 47.2
Nitab4.5_0003263g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.2e-14 82.4 89 50.6
Nitab4.5_0014949g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.2e-14 82.4 79 50.6
Nitab4.5_0026131g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.8e-14 82.0 79 49.4
Nitab4.5_0000970g0060 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.3e-14 80.9 89 48.3
Nitab4.5_0005864g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.3e-14 80.9 89 48.3
Peaxi162Scf00706g00120 Petunia axillaris HOM05D002441 ORTHO05D002376 6.3e-14 80.9 79 51.9
CAN.G849.8 Capsicum annuum HOM05D002441 ORTHO05D002376 1.1e-13 80.1 88 45.5
CAN.G1537.11 Capsicum annuum HOM05D002441 ORTHO05D002376 1.4e-13 79.7 79 51.9
Nitab4.5_0009530g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.4e-13 79.7 90 47.8
Peaxi162Scf00103g00815 Petunia axillaris HOM05D002441 ORTHO05D002376 1.4e-13 79.7 79 50.6
Nitab4.5_0002907g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.8e-13 79.3 79 49.4
Peaxi162Scf00347g00918 Petunia axillaris HOM05D002441 ORTHO05D002376 2.4e-13 79.0 79 50.6
Peaxi162Scf00429g00624 Petunia axillaris HOM05D002441 ORTHO05D002376 3.1e-13 78.6 80 51.2
Peaxi162Scf00385g00619 Petunia axillaris HOM05D002441 ORTHO05D002376 5.3e-13 77.8 92 42.4
Nitab4.5_0004197g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 7.0e-13 77.4 79 49.4
Nitab4.5_0008258g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.2e-12 76.6 82 47.6
Nitab4.5_0002544g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.6e-12 75.5 79 50.6
Nitab4.5_0002610g0010 Nicotiana tabacum HOM05D011943 ORTHO05D008317 3.5e-12 75.1 42 83.3
Peaxi162Scf00261g00059 Petunia axillaris HOM05D002441 ORTHO05D002376 3.5e-12 75.1 79 46.8
PGSC0003DMG400007030 Solanum tuberosum HOM05D002441 ORTHO05D002513 4.5e-12 74.7 86 46.5
CAN.G1139.20 Capsicum annuum HOM05D002441 ORTHO05D002376 5.9e-12 74.3 80 51.2
Peaxi162Scf00010g01319 Petunia axillaris HOM05D002441 ORTHO05D002376 5.9e-12 74.3 79 48.1
Peaxi162Scf11584g00003 Petunia axillaris HOM05D002441 ORTHO05D002376 5.9e-12 74.3 79 48.1
Peaxi162Scf00602g00313 Petunia axillaris HOM05D002441 ORTHO05D002376 7.7e-12 73.9 79 49.4
Nitab4.5_0002735g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.7e-11 72.8 78 51.3
Nitab4.5_0002175g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.2e-11 72.4 89 43.8
Nitab4.5_0001070g0070 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.9e-11 72.0 69 53.6
Nitab4.5_0000020g0400 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.1e-10 70.1 88 43.2
Nitab4.5_0000216g0290 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.9e-10 69.3 71 52.1
CAN.G321.48 Capsicum annuum HOM05D001267 ORTHO05D002376 2.5e-10 68.9 87 44.8
Nitab4.5_0008207g0040 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.5e-10 68.9 76 48.7
CAN.G505.25 Capsicum annuum HOM05D002441 ORTHO05D002376 4.2e-10 68.2 79 44.3
Nitab4.5_0004405g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.2e-10 68.2 88 42.0
Peaxi162Scf00006g02913 Petunia axillaris HOM05D002441 ORTHO05D002376 4.2e-10 68.2 83 44.6
Peaxi162Scf00588g00038 Petunia axillaris HOM05D002441 ORTHO05D002376 4.2e-10 68.2 83 44.6
Peaxi162Scf00832g00024 Petunia axillaris HOM05D002441 ORTHO05D002376 7.2e-10 67.4 100 40.0
CAN.G358.51 Capsicum annuum HOM05D002441 ORTHO05D002376 9.4e-10 67.0 91 42.9
Nitab4.5_0004863g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.1e-09 65.9 88 39.8
Peaxi162Scf00774g00217 Petunia axillaris HOM05D002441 ORTHO05D002376 2.1e-09 65.9 103 37.9
Nitab4.5_0000265g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.6e-09 65.1 54 63.0
arahy.Tifrunner.gnm1.ann1.PUQ8PF Arachis hypogaea HOM05D002441 ORTHO05D002376 6.1e-09 64.3 84 36.9
arahy.Tifrunner.gnm1.ann1.8R9H6F Arachis hypogaea HOM05D002441 ORTHO05D002376 8.0e-09 63.9 84 36.9
Nitab4.5_0000527g0110 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.0e-09 63.9 75 50.7
CAN.G681.71 Capsicum annuum HOM05D002441 ORTHO05D002376 1.8e-08 62.8 62 46.8
Nitab4.5_0009190g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.3e-08 62.4 66 53.0
arahy.Tifrunner.gnm1.ann1.D8EMDP Arachis hypogaea HOM05D002441 ORTHO05D002376 6.7e-08 60.8 84 35.7
Nitab4.5_0026297g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.7e-08 60.8 66 50.0
Nitab4.5_0000070g0310 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.8e-08 60.5 69 47.8
arahy.Tifrunner.gnm1.ann1.8J8DAZ Arachis hypogaea HOM05D002441 ORTHO05D002376 2.0e-07 59.3 76 40.8
arahy.Tifrunner.gnm1.ann1.Y0MAT2 Arachis hypogaea HOM05D002441 ORTHO05D002376 3.3e-07 58.5 76 39.5
CAN.G309.75 Capsicum annuum HOM05D000096 ORTHO05D012655 3.3e-07 58.5 52 55.8
Nitab4.5_0000090g0120 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.4e-07 58.2 96 37.5
Nitab4.5_0013831g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.4e-07 58.2 67 44.8
arahy.Tifrunner.gnm1.ann1.BSJS1T Arachis hypogaea HOM05D002441 ORTHO05D002376 9.7e-07 57.0 95 36.8
arahy.Tifrunner.gnm1.ann1.D5SYT8 Arachis hypogaea HOM05D002441 ORTHO05D002376 9.7e-07 57.0 83 33.7
CAN.G1359.4 Capsicum annuum HOM05D002441 ORTHO05D002376 9.7e-07 57.0 60 46.7
arahy.Tifrunner.gnm1.ann1.DBF1B4 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.2e-06 55.8 78 37.2
arahy.Tifrunner.gnm1.ann1.U0JAJ0 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.2e-06 55.8 78 37.2
Nitab4.5_0002702g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.2e-06 55.8 88 37.5
arahy.Tifrunner.gnm1.ann1.BDM5B3 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.8e-06 55.5 78 37.2
arahy.Tifrunner.gnm1.ann1.K3U0KS Arachis hypogaea HOM05D002441 ORTHO05D002376 2.8e-06 55.5 83 33.7
SGA_v2.0_scaffold21G09448 Striga asiatica HOM05D000353 ORTHO05D000174 2.8e-06 55.5 91 30.8
CAN.G694.34 Capsicum annuum HOM05D002441 ORTHO05D002376 3.7e-06 55.1 79 39.2
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 3.7e-06 55.1 80 33.8
arahy.Tifrunner.gnm1.ann1.11NDG0 Arachis hypogaea HOM05D002441 ORTHO05D002376 4.8e-06 54.7 72 40.3
arahy.Tifrunner.gnm1.ann1.40UDPE Arachis hypogaea HOM05D002441 ORTHO05D002376 4.8e-06 54.7 72 40.3
arahy.Tifrunner.gnm1.ann1.AFNT1S Arachis hypogaea HOM05D002441 ORTHO05D002376 4.8e-06 54.7 72 40.3
arahy.Tifrunner.gnm1.ann1.FKF8NN Arachis hypogaea HOM05D002441 ORTHO05D002376 4.8e-06 54.7 72 40.3
arahy.Tifrunner.gnm1.ann1.G1FX5D Arachis hypogaea HOM05D002441 ORTHO05D002376 4.8e-06 54.7 72 40.3
arahy.Tifrunner.gnm1.ann1.G9S7AV Arachis hypogaea HOM05D002441 ORTHO05D002376 4.8e-06 54.7 72 40.3
arahy.Tifrunner.gnm1.ann1.HTKL5C Arachis hypogaea HOM05D002441 ORTHO05D002376 4.8e-06 54.7 72 40.3
arahy.Tifrunner.gnm1.ann1.I5QAZJ Arachis hypogaea HOM05D002441 ORTHO05D002376 4.8e-06 54.7 72 40.3
arahy.Tifrunner.gnm1.ann1.IQTA4G Arachis hypogaea HOM05D002441 ORTHO05D002376 4.8e-06 54.7 72 40.3
arahy.Tifrunner.gnm1.ann1.PWRV1I Arachis hypogaea HOM05D002441 ORTHO05D002376 4.8e-06 54.7 72 40.3
Peaxi162Scf00070g00086 Petunia axillaris HOM05D002441 ORTHO05D002376 6.3e-06 54.3 56 50.0
arahy.Tifrunner.gnm1.ann1.VXHT09 Arachis hypogaea HOM05D002689 ORTHO05D002376 8.2e-06 53.9 76 40.8
CAN.G1181.26 Capsicum annuum HOM05D002441 ORTHO05D002376 8.2e-06 53.9 45 60.0


User provided reference genes

Program Settings