Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002391g0020 Nicotiana tabacum HOM05D000921 ORTHO05D004782 7.0e-273 943.3 475 100.0
Nitab4.5_0000131g0090 Nicotiana tabacum HOM05D000921 ORTHO05D004782 4.1e-241 837.8 460 93.5
CAN.G475.8 Capsicum annuum HOM05D000921 ORTHO05D004782 2.9e-226 788.5 429 91.8
Peaxi162Scf00454g00118 Petunia axillaris HOM05D000921 ORTHO05D004782 1.4e-225 786.2 431 90.7
Solyc04g076510.3 Solanum lycopersicum HOM05D000921 ORTHO05D004782 2.4e-225 785.4 429 92.3
Sopen04g030240 Solanum pennellii HOM05D000921 ORTHO05D004782 2.8e-221 771.9 469 84.6
Dinv42602 Davidia involucrata HOM05D000921 ORTHO05D004782 5.5e-177 624.8 430 72.6
Lj4C739G4 Lonicera japonica HOM05D000921 ORTHO05D004782 6.3e-173 611.3 437 69.3
vmacro21345 Vaccinium macrocarpon HOM05D000921 ORTHO05D004782 7.0e-172 607.8 429 69.7
TAR381G0975 Trochodendron aralioides HOM05D000921 ORTHO05D004782 2.6e-171 605.9 430 69.8
CSS0003023 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004782 7.7e-171 604.4 427 69.6
Cc10_g08460 Coffea canephora HOM05D000921 ORTHO05D004782 3.2e-169 599.0 430 69.1
TWI56G0737 Tripterygium wilfordii HOM05D000921 ORTHO05D004782 1.6e-168 596.7 430 70.2
GSVIVG01009194001 Vitis vinifera HOM05D000921 ORTHO05D004782 4.7e-168 595.1 432 68.1
Rhsim06G0071200 Rhododendron simsii HOM05D000921 ORTHO05D004782 1.0e-167 594.0 432 69.2
Thecc.08G072600 Theobroma cacao HOM05D000921 ORTHO05D004782 1.0e-162 577.4 448 65.6
Manes.18G056822 Manihot esculenta HOM05D000921 ORTHO05D004782 2.2e-162 576.2 432 67.1
CiPaw.07G164000 Carya illinoinensis HOM05D000921 ORTHO05D004782 2.9e-162 575.9 430 66.7
MD15G1387600 Malus domestica HOM05D000921 ORTHO05D004782 1.1e-161 573.9 430 65.8
MD08G1200600 Malus domestica HOM05D000921 ORTHO05D004782 9.4e-161 570.9 430 66.3
Atru.chr13.992 Acer truncatum HOM05D000921 ORTHO05D004782 6.1e-160 568.2 430 66.5
Eucgr.F00430 Eucalyptus grandis HOM05D000921 ORTHO05D004782 2.3e-159 566.2 430 65.6
Migut.N02862 Erythranthe guttata HOM05D000921 ORTHO05D004782 4.0e-159 565.5 429 65.0
Prupe.1G534000 Prunus persica HOM05D000921 ORTHO05D004782 7.5e-158 561.2 430 65.3
CANSAT54G2772 Cannabis sativa HOM05D000921 ORTHO05D004782 9.8e-158 560.8 430 66.0
EL10Ac1g00502 Beta vulgaris HOM05D000921 ORTHO05D004782 1.4e-156 557.0 427 64.4
Duzib116G0480 Durio zibethinus HOM05D000921 ORTHO05D004782 1.4e-156 557.0 435 65.7
DCAR_012852 Daucus carota HOM05D000921 ORTHO05D004782 9.1e-156 554.3 429 66.0
QL09p018095 Quercus lobata HOM05D000921 ORTHO05D004782 1.2e-155 553.9 452 62.4
Nn5g29852 Nelumbo nucifera HOM05D000921 ORTHO05D004782 5.9e-155 551.6 430 64.4
MSTRG.24432 Avicennia marina HOM05D000921 ORTHO05D004782 1.0e-154 550.8 429 67.4
RcHm_v2.0_Chr7g0235181 Rosa chinensis HOM05D000921 ORTHO05D004782 1.0e-154 550.8 430 64.7
Lsat_1_v5_gn_6_107401 Lactuca sativa HOM05D000921 ORTHO05D004782 1.3e-154 550.4 434 62.9
FAN18G1361 Fragaria x ananassa HOM05D000921 ORTHO05D004782 1.9e-153 546.6 438 62.3
ECA246G1489 Erigeron canadensis HOM05D000921 ORTHO05D004782 2.5e-153 546.2 435 62.8
FvH4_5g34530 Fragaria vesca HOM05D000921 ORTHO05D004782 3.2e-153 545.8 431 63.6
Sabra02G0087600 Salix brachista HOM05D000921 ORTHO05D004782 4.2e-153 545.4 437 64.1
FAN08G1747 Fragaria x ananassa HOM05D000921 ORTHO05D004782 1.6e-152 543.5 437 62.2
PGR042G3444 Punica granatum HOM05D000921 ORTHO05D004782 2.8e-152 542.7 429 64.3
Ciclev10000002m.g Citrus clementina HOM05D000921 ORTHO05D004782 6.8e-151 538.1 429 63.4
Potri.002G111000 Populus trichocarpa HOM05D000921 ORTHO05D004782 2.6e-150 536.2 430 62.3
Hund26819 Selenicereus undatus HOM05D000921 ORTHO05D004782 5.7e-150 535.0 463 59.6
Ah.05g171400 Amaranthus hybridus HOM05D000921 ORTHO05D004782 1.2e-147 527.3 428 62.1
Gorai.005G097000 Gossypium raimondii HOM05D000921 ORTHO05D004782 1.6e-147 526.9 435 64.1
Gohir.D02G086100 Gossypium hirsutum HOM05D000921 ORTHO05D004782 2.7e-147 526.2 435 63.9
Psat5g049440 Pisum sativum HOM05D000921 ORTHO05D004782 4.5e-147 525.4 429 61.5
FAN13G0958 Fragaria x ananassa HOM05D000921 ORTHO05D004782 1.3e-146 523.9 430 62.1
Medtr3g100060 Medicago truncatula HOM05D000921 ORTHO05D004782 1.7e-146 523.5 430 61.9
Gohir.A02G078900 Gossypium hirsutum HOM05D000921 ORTHO05D004782 2.9e-146 522.7 435 63.7
TPR.G6323 Trifolium pratense HOM05D000921 ORTHO05D004782 5.0e-146 521.9 429 60.6
HanXRQChr05g0163481 Helianthus annuus HOM05D000921 ORTHO05D004782 1.1e-145 520.8 435 61.1
COL.COLO4_35265 Corchorus olitorius HOM05D000921 ORTHO05D004782 2.5e-145 519.6 436 62.4
SGA_v2.0_scaffold28G11888 Striga asiatica HOM05D000921 ORTHO05D004782 7.3e-145 518.1 428 63.6
Ca_16011_v3 Cicer arietinum L. HOM05D000921 ORTHO05D004782 1.2e-144 517.3 429 60.6
Lj1g0023313 Lotus japonicus HOM05D000921 ORTHO05D004782 2.8e-144 516.2 430 61.4
Haze_22475 Corylus avellana HOM05D000921 ORTHO05D004782 6.1e-144 515.0 429 60.8
Actinidia19246 Actinidia chinensis HOM05D000921 ORTHO05D004782 1.0e-143 514.2 430 61.2
Glyma.04G096100 Glycine max HOM05D000921 ORTHO05D004782 1.0e-143 514.2 426 60.6
Thhalv10023210m.g Eutrema salsugineum HOM05D000921 ORTHO05D004782 4.0e-143 512.3 430 60.2
Carub.0002s0634 Capsella rubella HOM05D000921 ORTHO05D004782 5.2e-143 511.9 430 60.5
C01p35890 Brassica napus HOM05D000921 ORTHO05D004782 6.8e-143 511.5 431 59.6
BolC1t03548H Brassica oleracea HOM05D000921 ORTHO05D004782 6.8e-143 511.5 439 59.2
Lalb_Chr23g0270001 Lupinus albus HOM05D000921 ORTHO05D004782 6.8e-143 511.5 429 59.7
Aa31LG2G10910 Aethionema arabicum HOM05D000921 ORTHO05D004782 3.4e-142 509.2 430 60.0
AL2G18210 Arabidopsis lyrata HOM05D000921 ORTHO05D004782 3.4e-142 509.2 430 60.0
A01p28340 Brassica napus HOM05D000921 ORTHO05D004782 4.4e-142 508.8 430 59.8
BraA01t02962Z Brassica rapa HOM05D000921 ORTHO05D004782 4.4e-142 508.8 430 59.8
Glyma.06G097800 Glycine max HOM05D000921 ORTHO05D004782 4.4e-142 508.8 426 60.1
arahy.Tifrunner.gnm1.ann1.YNEA8K Arachis hypogaea HOM05D000921 ORTHO05D004782 1.3e-141 507.3 429 59.4
THA.LOC104816792 Tarenaya hassleriana HOM05D000921 ORTHO05D004782 1.7e-141 506.9 443 60.5
AT1G58230 Arabidopsis thaliana HOM05D000921 ORTHO05D004782 4.9e-141 505.4 430 59.5
MBI16_g31258_MAGBIO Magnolia biondii HOM05D000921 ORTHO05D004782 1.1e-140 504.2 438 59.4
Sp2g05370 Schrenkiella parvula HOM05D000921 ORTHO05D004782 3.2e-140 502.7 430 58.6
Sc06g0003790 Simmondsia chinensis HOM05D000921 ORTHO05D004782 3.2e-140 502.7 435 60.0
DCAR_019322 Daucus carota HOM05D000921 ORTHO05D004782 7.8e-139 498.0 434 59.2
CsaV3_3G048070 Cucumis sativus L. HOM05D000921 ORTHO05D004782 2.3e-138 496.5 429 59.2
Phvul.009G035500 Phaseolus vulgaris HOM05D000921 ORTHO05D004782 8.6e-138 494.6 430 58.4
MELO3C003512.2 Cucumis melo HOM05D000921 ORTHO05D004782 2.5e-137 493.0 429 59.4
Sed0023880 Sechium edule HOM05D000921 ORTHO05D004782 4.3e-137 492.3 429 59.9
AUR62014358 Chenopodium quinoa HOM05D000921 ORTHO05D004782 6.8e-135 485.0 440 57.7
AUR62019100 Chenopodium quinoa HOM05D000921 ORTHO05D004782 6.8e-135 485.0 440 57.7
ClCG11G014650 Citrullus lanatus HOM05D000921 ORTHO05D004782 2.9e-133 479.6 442 55.9
Aqoxy6G00846 Aquilegia oxysepala HOM05D000921 ORTHO05D004782 1.1e-132 477.6 429 56.6
ATR0767G173 Amborella trichopoda HOM05D000921 ORTHO05D004782 1.5e-126 457.2 447 55.5
Gohir.A06G031500 Gossypium hirsutum HOM05D000921 ORTHO05D004782 4.3e-113 412.5 435 52.9
Zm00001eb207540 Zea mays HOM05D000921 ORTHO05D004782 5.6e-113 412.1 433 51.3
Gorai.010G033700 Gossypium raimondii HOM05D000921 ORTHO05D004782 8.1e-112 408.3 435 52.6
CARHR053760 Cardamine hirsuta HOM05D000921 ORTHO05D004782 1.0e-106 391.3 327 58.4
Actinidia14237 Actinidia chinensis HOM05D000921 ORTHO05D004782 3.1e-103 379.8 279 64.9
Gohir.D06G030700 Gossypium hirsutum HOM05D000921 ORTHO05D004782 5.1e-98 362.5 398 51.8
HPP92_013164 Vanilla planifolia HOM05D000921 ORTHO05D004782 4.0e-87 326.2 438 45.2
unitig_578.g16055 Utricularia gibba HOM05D000921 ORTHO05D004782 9.3e-84 315.1 435 45.1
CDE02G0144 Ceratophyllum demersum HOM05D000921 ORTHO05D004782 4.1e-79 299.7 361 47.1
Cpa.g.sc21.33 Carica papaya HOM05D000921 ORTHO05D004782 3.4e-78 296.6 286 53.1
BcaNung06615 Brassica carinata HOM05D000921 ORTHO05D004782 1.2e-75 288.1 327 46.5
SEGI_08305 Sequoiadendron giganteum HOM05D000921 ORTHO05D004782 3.3e-73 280.0 384 44.5
SEGI_39738 Sequoiadendron giganteum HOM05D000921 ORTHO05D004782 4.8e-64 249.6 304 45.7
AagrBONN_evm.TU.Sc2ySwM_117.180 Anthoceros agrestis HOM05D000921 ORTHO05D004782 1.4e-63 248.1 480 36.7
Pp3c20_23460 Physcomitrium patens HOM05D000921 ORTHO05D004782 1.2e-54 218.4 472 35.0
Mapoly0001s0542 Marchantia polymorpha HOM05D000921 ORTHO05D004782 5.9e-54 216.1 456 32.7
HPP92_013162 Vanilla planifolia HOM05D000921 ORTHO05D004782 5.7e-49 199.5 340 40.6
Oeu028591.1 Olea europaea HOM05D000921 ORTHO05D004782 4.0e-42 176.8 168 59.5
SMO169G0155 Selaginella moellendorffii HOM05D000921 ORTHO05D004782 2.1e-35 154.5 360 31.7
CARHR053750 Cardamine hirsuta HOM05D000921 ORTHO05D004782 2.1e-27 127.9 91 72.5
CBR_g9087 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-20 105.5 294 30.6
SMO169G0086 Selaginella moellendorffii HOM05D000921 ORTHO05D004782 1.1e-10 72.4 90 46.7
Nn5g29847 Nelumbo nucifera HOM05D000921 ORTHO05D004782 4.4e-09 67.0 36 88.9
EL10Ac9g22580 Beta vulgaris HOM05D000200 ORTHO05D000262 2.4e-07 61.2 57 45.6
CBR_g9089 Chara braunii HOM05D000921 ORTHO05D004782 2.7e-06 57.8 88 35.2


User provided reference genes

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