Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 9.2e-184 646.7 323 100.0
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 3.0e-158 562.0 342 81.6
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 5.3e-155 551.2 333 85.6
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 2.6e-154 548.9 364 78.6
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 8.4e-153 543.9 364 77.2
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 1.4e-152 543.1 364 77.5
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 2.5e-149 532.3 362 76.0
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 6.1e-127 458.0 361 64.8
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 1.0e-126 457.2 352 66.5
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 3.3e-125 452.2 357 64.4
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 1.1e-123 447.2 362 63.0
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 1.8e-123 446.4 364 63.2
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 2.4e-123 446.0 396 57.8
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 5.3e-123 444.9 362 62.7
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 1.2e-122 443.7 362 61.6
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 1.2e-122 443.7 355 62.5
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 2.6e-122 442.6 361 60.9
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 8.5e-121 437.6 360 62.2
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 9.4e-120 434.1 356 62.4
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 9.4e-120 434.1 354 61.3
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 2.1e-119 433.0 356 62.1
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 2.1e-119 433.0 357 62.2
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.7e-119 432.6 355 61.4
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 6.1e-119 431.4 363 61.4
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 1.8e-118 429.9 357 62.2
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 5.1e-118 428.3 355 60.8
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 5.1e-118 428.3 358 60.1
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 5.1e-118 428.3 356 62.6
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 3.7e-116 422.2 355 61.1
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 6.3e-116 421.4 353 60.1
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 8.2e-116 421.0 356 60.7
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 1.8e-115 419.9 361 59.6
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 2.4e-115 419.5 355 60.0
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 4.1e-115 418.7 351 59.8
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 5.3e-115 418.3 355 60.0
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 5.3e-115 418.3 361 59.0
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 2.0e-114 416.4 363 58.7
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.6e-114 416.0 353 60.3
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 5.9e-114 414.8 355 59.7
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 7.7e-114 414.5 363 58.7
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 1.3e-113 413.7 358 58.9
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 2.9e-113 412.5 353 58.6
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.8e-113 412.1 356 58.4
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 1.4e-112 410.2 361 58.2
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 1.4e-112 410.2 364 58.2
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 1.4e-112 410.2 364 58.2
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 1.4e-112 410.2 364 58.2
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 3.2e-112 409.1 353 59.5
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 2.7e-111 406.0 361 55.7
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 3.6e-111 405.6 352 60.2
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 4.7e-111 405.2 353 58.9
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 6.1e-111 404.8 353 58.6
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 7.9e-111 404.4 348 58.0
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 7.9e-111 404.4 359 57.7
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 1.0e-110 404.1 351 58.7
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 1.0e-110 404.1 358 60.6
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 2.3e-110 402.9 328 61.9
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 3.0e-110 402.5 341 59.5
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 3.0e-110 402.5 395 55.4
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 2.6e-109 399.4 356 56.2
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 2.6e-109 399.4 413 52.8
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 7.4e-109 397.9 353 58.9
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 7.4e-109 397.9 350 57.7
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 1.7e-108 396.7 362 58.0
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 2.8e-108 396.0 351 57.5
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 4.8e-108 395.2 324 61.7
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 1.8e-107 393.3 350 55.4
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 7.0e-107 391.3 363 56.2
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 1.0e-105 387.5 355 57.5
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 1.0e-105 387.5 324 61.1
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 3.2e-104 382.5 354 56.8
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 2.1e-103 379.8 322 58.4
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 8.0e-103 377.9 319 61.8
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 3.0e-102 375.9 319 60.8
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 4.4e-101 372.1 342 55.0
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 2.2e-100 369.8 317 59.3
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 1.7e-97 360.1 352 50.9
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 2.9e-97 359.4 346 52.0
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 4.7e-95 352.1 316 57.3
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 1.3e-92 344.0 310 58.7
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 1.7e-89 333.6 290 59.7
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 6.3e-84 315.1 315 53.3
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 1.5e-72 277.3 330 43.9
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 2.8e-71 273.1 227 62.1
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 3.1e-70 269.6 339 43.4
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 1.2e-69 267.7 340 44.1
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 1.2e-69 267.7 202 64.9
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 2.5e-64 250.0 333 41.7
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 5.4e-59 232.3 198 59.1
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 2.4e-46 190.3 208 51.4
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 3.8e-44 183.0 268 42.9
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 2.1e-42 177.2 463 28.1
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 4.6e-42 176.0 175 53.1
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.5e-37 159.5 121 65.3
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.3e-32 142.9 108 65.7
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.3e-32 142.9 108 65.7
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 4.0e-22 109.8 151 40.4
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 6.5e-20 102.4 88 55.7
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 8.4e-20 102.1 268 31.0
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 6.3e-15 85.9 75 61.3
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 4.1e-14 83.2 89 40.4
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 1.0e-12 78.6 88 36.4
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 1.5e-08 64.7 84 47.6


User provided reference genes

Program Settings