Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002372g0060 Nicotiana tabacum HOM05D003158 ORTHO05D003560 1.1e-63 246.5 124 100.0
Nitab4.5_0002436g0050 Nicotiana tabacum HOM05D003158 ORTHO05D003560 8.2e-56 220.3 118 92.4
Nitab4.5_0005340g0030 Nicotiana tabacum HOM05D003158 ORTHO05D003560 8.4e-53 210.3 118 91.5
Solyc01g094040.3 Solanum lycopersicum HOM05D003158 ORTHO05D003560 5.0e-45 184.5 117 82.9
PGSC0003DMG400000142 Solanum tuberosum HOM05D003158 ORTHO05D003560 5.0e-45 184.5 118 83.1
Sopen01g037860 Solanum pennellii HOM05D003158 ORTHO05D003560 3.2e-44 181.8 117 82.1
Peaxi162Scf00988g00320 Petunia axillaris HOM05D003158 ORTHO05D003560 3.6e-43 178.3 113 77.0
Dinv32397 Davidia involucrata HOM05D003158 ORTHO05D003560 1.8e-39 166.0 114 66.7
Oeu026237.1 Olea europaea HOM05D003158 ORTHO05D003560 4.2e-36 154.8 119 64.7
Cfa001832 Carpinus fangiana HOM05D000524 ORTHO05D000381 6.3e-32 141.0 115 59.1
Thecc.01G372700 Theobroma cacao HOM05D003158 ORTHO05D003560 6.3e-32 141.0 109 61.5
Duzib138G1748 Durio zibethinus HOM05D003158 ORTHO05D003560 8.2e-32 140.6 108 65.7
CiPaw.02G165400 Carya illinoinensis HOM05D003158 ORTHO05D003560 1.1e-31 140.2 117 56.4
Haze_16726 Corylus avellana HOM05D003158 ORTHO05D003560 1.8e-31 139.4 117 58.1
QL08p051591 Quercus lobata HOM05D003158 ORTHO05D003560 3.1e-31 138.7 119 55.5
GSVIVG01027562001 Vitis vinifera HOM05D003158 ORTHO05D003560 9.1e-31 137.1 118 56.8
Atru.chr5.356 Acer truncatum HOM05D003158 ORTHO05D003560 2.0e-30 136.0 119 57.1
COL.COLO4_12587 Corchorus olitorius HOM05D003158 ORTHO05D003560 5.9e-30 134.4 103 61.2
Rhsim01G0161100 Rhododendron simsii HOM05D003158 ORTHO05D003560 7.7e-30 134.0 117 54.7
Lsat_1_v5_gn_4_37561 Lactuca sativa HOM05D003158 ORTHO05D003560 6.5e-29 131.0 101 61.4
SGA_v2.0_scaffold43G16463 Striga asiatica HOM05D003158 ORTHO05D003560 6.5e-29 131.0 118 59.3
Cpa.g.sc18.153 Carica papaya HOM05D003158 ORTHO05D003560 1.5e-28 129.8 106 60.4
Cc02_g36380 Coffea canephora HOM05D003158 ORTHO05D003560 1.9e-28 129.4 116 57.8
CAN.G1561.15 Capsicum annuum HOM05D003158 ORTHO05D003560 2.5e-28 129.0 97 70.1
Manes.01G264500 Manihot esculenta HOM05D003158 ORTHO05D003560 5.5e-28 127.9 116 50.9
ClCG06G000290 Citrullus lanatus HOM05D003158 ORTHO05D003560 2.7e-27 125.6 98 55.1
Gohir.D07G151400 Gossypium hirsutum HOM05D003158 ORTHO05D003560 4.7e-27 124.8 128 53.9
Sed0020500 Sechium edule HOM05D003158 ORTHO05D003560 4.7e-27 124.8 121 50.4
Actinidia33455 Actinidia chinensis HOM05D003158 ORTHO05D003560 8.0e-27 124.0 109 56.9
Ciclev10022194m.g Citrus clementina HOM05D003158 ORTHO05D003560 8.0e-27 124.0 117 49.6
Ca_07839_v3 Cicer arietinum L. HOM05D003158 ORTHO05D003560 1.0e-26 123.6 121 53.7
Duzib268G0200 Durio zibethinus HOM05D003158 ORTHO05D003560 1.0e-26 123.6 121 56.2
Gohir.A07G145200 Gossypium hirsutum HOM05D003158 ORTHO05D003560 1.0e-26 123.6 128 53.1
HanXRQChr16g0523401 Helianthus annuus HOM05D003158 ORTHO05D003560 1.0e-26 123.6 110 53.6
SalBow5G4846 Salvia bowleyana HOM05D003158 ORTHO05D003560 1.8e-26 122.9 69 81.2
DCAR_006883 Daucus carota HOM05D003158 ORTHO05D003560 3.0e-26 122.1 116 51.7
Rhsim01G0161200 Rhododendron simsii HOM05D003158 ORTHO05D003560 8.8e-26 120.6 112 53.6
Medtr7g075770 Medicago truncatula HOM05D003158 ORTHO05D003560 3.3e-25 118.6 97 56.7
CsaV3_6G006080 Cucumis sativus L. HOM05D003158 ORTHO05D003560 4.4e-25 118.2 122 45.9
PGR031G1765 Punica granatum HOM05D003158 ORTHO05D003560 5.7e-25 117.9 117 50.4
Gorai.001G173300 Gossypium raimondii HOM05D003158 ORTHO05D003560 7.5e-25 117.5 127 50.4
MD02G1199000 Malus domestica HOM05D003158 ORTHO05D003560 2.8e-24 115.5 123 52.8
Prupe.2G149300 Prunus persica HOM05D003158 ORTHO05D003560 3.7e-24 115.2 117 54.7
CSS0031380 Camellia sinensis var. sinensis HOM05D003158 ORTHO05D003560 1.1e-23 113.6 100 58.0
CSS0032795 Camellia sinensis var. sinensis HOM05D003158 ORTHO05D003560 1.1e-23 113.6 100 58.0
Lalb_Chr01g0021261 Lupinus albus HOM05D003158 ORTHO05D003560 1.8e-23 112.8 100 62.0
MELO3C022509.2 Cucumis melo HOM05D003158 ORTHO05D003560 2.4e-23 112.5 98 55.1
Lj7C525T12 Lonicera japonica HOM05D003158 ORTHO05D003560 2.4e-23 112.5 114 52.6
TAR629G2043 Trochodendron aralioides HOM05D003158 ORTHO05D003560 2.4e-23 112.5 69 76.8
Potri.014G072700 Populus trichocarpa HOM05D003158 ORTHO05D003560 3.1e-23 112.1 99 54.5
Eucgr.D02434 Eucalyptus grandis HOM05D003158 ORTHO05D003560 5.3e-23 111.3 75 68.0
Hma1.2p1_0532F.1_g173415 Hydrangea macrophylla HOM05D003158 ORTHO05D003560 5.3e-23 111.3 114 48.2
MBI04_g26203_MAGBIO Magnolia biondii HOM05D003158 ORTHO05D003560 2.0e-22 109.4 112 56.2
TWI59G0507 Tripterygium wilfordii HOM05D003158 ORTHO05D003560 3.5e-22 108.6 100 57.0
CSS0030800 Camellia sinensis var. sinensis HOM05D003158 ORTHO05D003560 2.2e-21 105.9 111 47.7
Potri.002G150600 Populus trichocarpa HOM05D003158 ORTHO05D003560 2.2e-21 105.9 116 49.1
Psat0ss4236g0240 Pisum sativum HOM05D003158 ORTHO05D003560 6.5e-21 104.4 119 47.9
ECA234G4259 Erigeron canadensis HOM05D003158 ORTHO05D003560 1.5e-20 103.2 102 55.9
Sabra14G0051900 Salix brachista HOM05D003158 ORTHO05D003560 1.5e-20 103.2 99 50.5
VMungo1383G0950 Vigna mungo HOM05D003158 ORTHO05D003560 1.5e-20 103.2 69 65.2
Glyma.18G223900 Glycine max HOM05D003158 ORTHO05D003560 1.9e-20 102.8 67 70.1
Phvul.008G074200 Phaseolus vulgaris HOM05D003158 ORTHO05D003560 3.2e-20 102.1 69 65.2
Migut.N01585 Erythranthe guttata HOM05D003158 ORTHO05D003560 5.5e-20 101.3 119 51.3
TPR.G12345 Trifolium pratense HOM05D003158 ORTHO05D003560 5.5e-20 101.3 120 41.7
AUR62004253 Chenopodium quinoa HOM05D003158 ORTHO05D003560 7.2e-20 100.9 74 56.8
Lj1g0016529 Lotus japonicus HOM05D003158 ORTHO05D003560 1.2e-19 100.1 74 68.9
arahy.Tifrunner.gnm1.ann1.4ZPK1I Arachis hypogaea HOM05D003158 ORTHO05D003560 4.7e-19 98.2 97 51.5
Aqoxy5G03941 Aquilegia oxysepala HOM05D003158 ORTHO05D003560 1.4e-18 96.7 122 46.7
MBI04_g41104_MAGBIO Magnolia biondii HOM05D003158 ORTHO05D003560 2.3e-18 95.9 89 59.6
arahy.Tifrunner.gnm1.ann1.YQF4QR Arachis hypogaea HOM05D003158 ORTHO05D003560 5.2e-18 94.7 97 50.5
vmacro20993 Vaccinium macrocarpon HOM05D003158 ORTHO05D003560 5.2e-18 94.7 115 44.3
Nn6g34346 Nelumbo nucifera HOM05D003158 ORTHO05D003560 2.0e-17 92.8 120 48.3
AUR62042743 Chenopodium quinoa HOM05D003158 ORTHO05D003560 2.6e-17 92.4 68 55.9
Hund27341 Selenicereus undatus HOM05D003158 ORTHO05D003560 7.5e-17 90.9 66 62.1
RcHm_v2.0_Chr1g0351281 Rosa chinensis HOM05D003158 ORTHO05D003560 9.8e-17 90.5 118 47.5
FvH4_7g12470 Fragaria vesca HOM05D003158 ORTHO05D003560 2.2e-16 89.4 123 46.3
FAN06G3727 Fragaria x ananassa HOM05D003158 ORTHO05D003560 2.2e-16 89.4 123 46.3
FAN06G4544 Fragaria x ananassa HOM05D003158 ORTHO05D003560 2.2e-16 89.4 123 46.3
FAN03G1209 Fragaria x ananassa HOM05D003158 ORTHO05D003560 4.8e-16 88.2 119 48.7
EL10Ac1g00920 Beta vulgaris HOM05D003158 ORTHO05D003560 6.3e-16 87.8 74 50.0
FAN01G1454 Fragaria x ananassa HOM05D003158 ORTHO05D003560 8.3e-16 87.4 123 45.5
FAN10G2980 Fragaria x ananassa HOM05D003158 ORTHO05D003560 3.1e-15 85.5 119 46.2
CANSAT56G0087 Cannabis sativa HOM05D003158 ORTHO05D003560 7.0e-15 84.3 66 56.1
FAN10G4201 Fragaria x ananassa HOM05D003158 ORTHO05D003560 9.1e-15 84.0 119 46.2
HPP92_023385 Vanilla planifolia HOM05D003158 ORTHO05D003560 9.1e-15 84.0 120 44.2
Glyma.09G266700 Glycine max HOM05D003158 ORTHO05D003560 1.6e-14 83.2 69 59.4
Sc23g0003430 Simmondsia chinensis HOM05D003158 ORTHO05D003560 2.0e-14 82.8 69 53.6
PSO478G2600 Papaver somniferum HOM05D003158 ORTHO05D003560 5.9e-14 81.3 69 56.5
PSO782G3191 Papaver somniferum HOM05D003158 ORTHO05D003560 1.3e-13 80.1 68 52.9
ATR0661G345 Amborella trichopoda HOM05D003158 ORTHO05D003560 1.7e-13 79.7 105 43.8
Psat0s2305g0040 Pisum sativum HOM05D003158 ORTHO05D003560 3.8e-13 78.6 98 48.0
Os12g0454600 Oryza sativa ssp. japonica HOM05D003158 ORTHO05D003560 6.5e-13 77.8 73 52.1
Ca_06187_v3 Cicer arietinum L. HOM05D003158 ORTHO05D003560 2.5e-12 75.9 96 44.8
Sabra09G0050200 Salix brachista HOM05D003158 ORTHO05D003560 3.6e-11 72.0 93 44.1
HPP92_003586 Vanilla planifolia HOM05D003158 ORTHO05D003560 4.7e-11 71.6 110 42.7
MBI13_g09207_MAGBIO Magnolia biondii HOM05D003158 ORTHO05D003560 8.0e-11 70.9 111 37.8
Os01g0281600 Oryza sativa ssp. japonica HOM05D003158 ORTHO05D003560 8.0e-11 70.9 90 45.6
SEGI_22430 Sequoiadendron giganteum HOM05D003158 ORTHO05D003560 1.4e-10 70.1 108 40.7
SEGI_27110 Sequoiadendron giganteum HOM05D003158 ORTHO05D003560 1.8e-10 69.7 122 36.9
CsaV3_6G038780 Cucumis sativus L. HOM05D003158 ORTHO05D003560 5.2e-10 68.2 97 42.3
Glyma.02G277700 Glycine max HOM05D003158 ORTHO05D003560 5.2e-10 68.2 95 43.2
QL01p016398 Quercus lobata HOM05D003158 ORTHO05D003560 5.2e-10 68.2 134 35.1
Zm00001eb200430 Zea mays HOM05D003158 ORTHO05D003560 6.8e-10 67.8 111 43.2
Medtr5g088990 Medicago truncatula HOM05D003158 ORTHO05D003560 8.8e-10 67.4 100 46.0
Zm00001eb129330 Zea mays HOM05D003158 ORTHO05D003560 8.8e-10 67.4 85 44.7
TPR.G16406 Trifolium pratense HOM05D003158 ORTHO05D003560 1.2e-09 67.0 98 41.8
MD11G1183800 Malus domestica HOM05D003158 ORTHO05D003560 1.5e-09 66.6 88 42.0
Potri.001G273000 Populus trichocarpa HOM05D003158 ORTHO05D003560 1.5e-09 66.6 93 40.9
Potri.009G067300 Populus trichocarpa HOM05D003158 ORTHO05D003560 1.5e-09 66.6 93 40.9
Lsat_1_v5_gn_2_31121 Lactuca sativa HOM05D003158 ORTHO05D003560 2.0e-09 66.2 71 49.3
Phvul.008G203314 Phaseolus vulgaris HOM05D003158 ORTHO05D003560 2.0e-09 66.2 103 41.7
GSVIVG01037359001 Vitis vinifera HOM05D003158 ORTHO05D003560 2.0e-09 66.2 100 42.0
Eucgr.B03755 Eucalyptus grandis HOM05D003158 ORTHO05D003560 2.6e-09 65.9 98 42.9
Manes.02G136300 Manihot esculenta HOM05D003158 ORTHO05D003560 2.6e-09 65.9 94 42.6
EL10Ac4g10084 Beta vulgaris HOM05D003158 ORTHO05D003560 3.4e-09 65.5 89 42.7
MELO3C014540.2 Cucumis melo HOM05D003158 ORTHO05D003560 3.4e-09 65.5 87 43.7
Glyma.14G036900 Glycine max HOM05D003158 ORTHO05D003560 3.4e-09 65.5 95 41.1
Gohir.A05G072400 Gossypium hirsutum HOM05D003158 ORTHO05D003560 3.4e-09 65.5 98 39.8
Sabra16G0168200 Salix brachista HOM05D003158 ORTHO05D003560 3.4e-09 65.5 93 41.9
VMungo0647G1275 Vigna mungo HOM05D003158 ORTHO05D003560 3.4e-09 65.5 98 40.8
MSTRG.17640 Avicennia marina HOM05D003158 ORTHO05D003560 4.4e-09 65.1 96 40.6
Prupe.4G270100 Prunus persica HOM05D003158 ORTHO05D003560 5.7e-09 64.7 100 40.0
TAR623G1391 Trochodendron aralioides HOM05D003158 ORTHO05D003560 5.7e-09 64.7 98 37.8
CANSAT54G2684 Cannabis sativa HOM05D003158 ORTHO05D003560 7.5e-09 64.3 96 44.8
Rhsim13G0204900 Rhododendron simsii HOM05D003158 ORTHO05D003560 7.5e-09 64.3 99 39.4
ATR0307G078 Amborella trichopoda HOM05D003158 ORTHO05D003560 9.8e-09 63.9 93 40.9
ClCG02G022660 Citrullus lanatus HOM05D003158 ORTHO05D003560 9.8e-09 63.9 97 40.2
Hund07418 Selenicereus undatus HOM05D003158 ORTHO05D003560 9.8e-09 63.9 88 42.0
TAR633G2256 Trochodendron aralioides HOM05D003158 ORTHO05D003560 9.8e-09 63.9 111 36.9
Sabra02G0119000 Salix brachista HOM05D003158 ORTHO05D003560 1.3e-08 63.5 48 54.2
PSO339G6483 Papaver somniferum HOM05D003158 ORTHO05D003560 1.7e-08 63.2 71 46.5
SalBow6G6419 Salvia bowleyana HOM05D003158 ORTHO05D003560 1.7e-08 63.2 95 38.9
Ah.06g194810 Amaranthus hybridus HOM05D003158 ORTHO05D003560 2.2e-08 62.8 89 41.6
arahy.Tifrunner.gnm1.ann1.FW4L9V Arachis hypogaea HOM05D003158 ORTHO05D003560 2.2e-08 62.8 104 38.5
AUR62006567 Chenopodium quinoa HOM05D003158 ORTHO05D003560 2.2e-08 62.8 89 41.6
Lalb_Chr04g0249311 Lupinus albus HOM05D003158 ORTHO05D003560 2.2e-08 62.8 96 41.7
Thecc.09G254200 Theobroma cacao HOM05D003158 ORTHO05D003560 2.2e-08 62.8 98 37.8
CDE11G1243 Ceratophyllum demersum HOM05D003158 ORTHO05D003560 2.8e-08 62.4 116 34.5
COL.COLO4_06622 Corchorus olitorius HOM05D003158 ORTHO05D003560 2.8e-08 62.4 98 39.8
Peaxi162Scf00029g02515 Petunia axillaris HOM05D003158 ORTHO05D003560 2.8e-08 62.4 95 38.9
Solyc11g062350.2 Solanum lycopersicum HOM05D003158 ORTHO05D003560 2.8e-08 62.4 97 41.2
arahy.Tifrunner.gnm1.ann1.Z71ZTI Arachis hypogaea HOM05D003158 ORTHO05D003560 3.7e-08 62.0 71 46.5
RcHm_v2.0_Chr7g0211321 Rosa chinensis HOM05D003158 ORTHO05D003560 3.7e-08 62.0 94 41.5
Sc09g0001140 Simmondsia chinensis HOM05D003158 ORTHO05D003560 3.7e-08 62.0 101 37.6
Gohir.D05G075200 Gossypium hirsutum HOM05D003158 ORTHO05D003560 4.9e-08 61.6 98 38.8
Gorai.009G076500 Gossypium raimondii HOM05D003158 ORTHO05D003560 4.9e-08 61.6 98 38.8
MD03G1156900 Malus domestica HOM05D003158 ORTHO05D003560 4.9e-08 61.6 71 46.5
PGR102G0878 Punica granatum HOM05D003158 ORTHO05D003560 4.9e-08 61.6 98 41.8
Atru.chr3.2852 Acer truncatum HOM05D003158 ORTHO05D003560 6.3e-08 61.2 103 41.7
LjContig00564g0021632 Lotus japonicus HOM05D003158 ORTHO05D003560 6.3e-08 61.2 97 42.3
Sopen11g024320 Solanum pennellii HOM05D003158 ORTHO05D003560 6.3e-08 61.2 97 41.2
TWI79G0487 Tripterygium wilfordii HOM05D003158 ORTHO05D003560 6.3e-08 61.2 96 42.7
Ciclev10016454m.g Citrus clementina HOM05D003158 ORTHO05D003560 8.3e-08 60.8 71 46.5
Duzib150G0466 Durio zibethinus HOM05D003158 ORTHO05D003560 8.3e-08 60.8 99 39.4
ECA238G4331 Erigeron canadensis HOM05D003158 ORTHO05D003560 8.3e-08 60.8 91 42.9
Dinv36135 Davidia involucrata HOM05D003158 ORTHO05D003560 1.1e-07 60.5 107 36.4
unitig_578.g16662 Utricularia gibba HOM05D003158 ORTHO05D003560 1.1e-07 60.5 94 39.4
Cc01_g06530 Coffea canephora HOM05D003158 ORTHO05D003560 1.4e-07 60.1 96 40.6
Hma1.2p1_0460F.1_g157670 Hydrangea macrophylla HOM05D003158 ORTHO05D003560 1.4e-07 60.1 112 37.5
Lalb_Chr10g0106111 Lupinus albus HOM05D003158 ORTHO05D003560 1.4e-07 60.1 98 40.8
SGA_v2.0_scaffold29G12207 Striga asiatica HOM05D003158 ORTHO05D003560 1.4e-07 60.1 96 38.5
vmacro04084 Vaccinium macrocarpon HOM05D003158 ORTHO05D003560 1.4e-07 60.1 70 42.9
Aqoxy2G00508 Aquilegia oxysepala HOM05D003158 ORTHO05D003560 1.8e-07 59.7 103 40.8
HanXRQChr14g0432891 Helianthus annuus HOM05D003158 ORTHO05D003560 1.8e-07 59.7 70 47.1
PGSC0003DMG400032506 Solanum tuberosum HOM05D003158 ORTHO05D003560 2.4e-07 59.3 95 41.1
CAN.G331.7 Capsicum annuum HOM05D003158 ORTHO05D003560 3.1e-07 58.9 97 38.1
Nitab4.5_0002026g0130 Nicotiana tabacum HOM05D003158 ORTHO05D003560 7.0e-07 57.8 95 38.9
RcHm_v2.0_Chr5g0044801 Rosa chinensis HOM05D003158 ORTHO05D003560 1.2e-06 57.0 94 39.4
CiPaw.14G110400 Carya illinoinensis HOM05D003158 ORTHO05D003560 1.6e-06 56.6 103 37.9
Haze_23273 Corylus avellana HOM05D003158 ORTHO05D003560 2.0e-06 56.2 59 49.2
Nn7g36905 Nelumbo nucifera HOM05D003158 ORTHO05D003560 2.0e-06 56.2 95 37.9
Nn2g14745 Nelumbo nucifera HOM05D003158 ORTHO05D003560 2.7e-06 55.8 90 40.0
Cfa009916 Carpinus fangiana HOM05D003158 ORTHO05D003560 3.5e-06 55.5 100 38.0
Sed0025886 Sechium edule HOM05D003158 ORTHO05D003560 3.5e-06 55.5 97 39.2
Cpa.g.c32589 Carica papaya HOM05D003158 ORTHO05D003560 4.5e-06 55.1 96 38.5
Lj4C833T1 Lonicera japonica HOM05D003158 ORTHO05D003560 5.9e-06 54.7 72 43.1
FAN13G1331 Fragaria x ananassa HOM05D003158 ORTHO05D003560 7.7e-06 54.3 94 39.4
FAN13G1881 Fragaria x ananassa HOM05D003158 ORTHO05D003560 7.7e-06 54.3 94 39.4


User provided reference genes

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