Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002370g0080 Nicotiana tabacum HOM05D007281 ORTHO05D009241 1.0e-111 407.5 207 100.0
Nitab4.5_0001871g0100 Nicotiana tabacum HOM05D007281 ORTHO05D009241 1.3e-95 354.0 210 84.8
Peaxi162Scf00007g02726 Petunia axillaris HOM05D007281 ORTHO05D009241 1.5e-91 340.5 201 85.6
Solyc07g054680.3 Solanum lycopersicum HOM05D007281 ORTHO05D009241 1.5e-83 313.9 201 79.6
CAN.G508.23 Capsicum annuum HOM05D007281 ORTHO05D009241 2.1e-80 303.5 201 78.1
PGSC0003DMG400018370 Solanum tuberosum HOM05D007281 ORTHO05D009241 3.1e-76 289.7 186 80.1
Dinv15494 Davidia involucrata HOM05D007281 ORTHO05D009241 1.3e-55 221.1 209 56.0
Actinidia30489 Actinidia chinensis HOM05D007281 ORTHO05D009241 3.7e-53 213.0 208 54.3
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla HOM05D007281 ORTHO05D009241 4.0e-52 209.5 207 54.1
CSS0001951 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 1.3e-50 204.5 202 54.0
CSS0030135 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 1.3e-50 204.5 202 54.0
TAR633G2446 Trochodendron aralioides HOM05D007281 ORTHO05D009241 2.9e-50 203.4 210 54.3
TAR636G0075 Trochodendron aralioides HOM05D007281 ORTHO05D009241 1.2e-48 198.0 210 52.9
Lj1P735T42 Lonicera japonica HOM05D007281 ORTHO05D009241 1.8e-47 194.1 186 52.2
Rhsim04G0063100 Rhododendron simsii HOM05D007281 ORTHO05D009241 3.9e-47 193.0 186 53.8
Cfa014545 Carpinus fangiana HOM05D007281 ORTHO05D009241 6.7e-47 192.2 204 52.5
GSVIVG01020865001 Vitis vinifera HOM05D007281 ORTHO05D009241 6.7e-47 192.2 210 53.3
QL03p011182 Quercus lobata HOM05D007281 ORTHO05D009241 1.5e-46 191.0 204 53.4
Sopen07g028580 Solanum pennellii HOM05D007281 ORTHO05D009241 1.9e-46 190.7 124 77.4
Atru.chr6.3074 Acer truncatum HOM05D007281 ORTHO05D009241 7.4e-46 188.7 212 51.9
DCAR_012978 Daucus carota HOM05D007281 ORTHO05D009241 4.8e-45 186.0 182 51.6
Thecc.02G171700 Theobroma cacao HOM05D007281 ORTHO05D009241 6.3e-45 185.7 209 49.3
Cc05_g06270 Coffea canephora HOM05D007281 ORTHO05D009241 1.1e-44 184.9 200 48.0
CiPaw.03G169800 Carya illinoinensis HOM05D007281 ORTHO05D009241 6.9e-44 182.2 200 51.0
Haze_13088 Corylus avellana HOM05D007281 ORTHO05D009241 2.6e-43 180.3 202 50.5
Sabra09G0050300 Salix brachista HOM05D007281 ORTHO05D009241 7.6e-43 178.7 211 45.5
Manes.01G177300 Manihot esculenta HOM05D007281 ORTHO05D009241 2.2e-42 177.2 210 47.1
Sabra16G0168300 Salix brachista HOM05D007281 ORTHO05D009241 7.2e-41 172.2 201 48.3
Sc06g0009160 Simmondsia chinensis HOM05D007281 ORTHO05D009241 3.0e-39 166.8 168 55.4
Cpa.g.sc116.70 Carica papaya HOM05D007281 ORTHO05D009241 8.7e-39 165.2 203 46.8
ECA234G1359 Erigeron canadensis HOM05D007281 ORTHO05D009241 9.7e-38 161.8 198 46.0
ClCG01G013900 Citrullus lanatus HOM05D007281 ORTHO05D009241 2.8e-37 160.2 207 47.3
Potri.009G067400 Populus trichocarpa HOM05D007281 ORTHO05D009241 3.7e-37 159.8 145 54.5
TWI36G0005 Tripterygium wilfordii HOM05D007281 ORTHO05D009241 1.8e-36 157.5 196 45.9
CANSAT64G1356 Cannabis sativa HOM05D007281 ORTHO05D009241 2.4e-36 157.1 208 45.2
Nn8g41289 Nelumbo nucifera HOM05D007281 ORTHO05D009241 3.1e-36 156.8 182 45.6
Glyma.13G301000 Glycine max HOM05D007281 ORTHO05D009241 6.9e-36 155.6 184 46.2
Potri.001G273100 Populus trichocarpa HOM05D007281 ORTHO05D009241 9.0e-36 155.2 158 51.3
AUR62041771 Chenopodium quinoa HOM05D007281 ORTHO05D009241 5.9e-35 152.5 198 43.9
MBI03_g06061_MAGBIO Magnolia biondii HOM05D007281 ORTHO05D009241 1.3e-34 151.4 170 47.6
MSTRG.13304 Avicennia marina HOM05D007281 ORTHO05D009241 1.7e-34 151.0 184 44.6
Lj3g0021775 Lotus japonicus HOM05D007281 ORTHO05D009241 1.7e-34 151.0 185 47.0
PSO384G2432 Papaver somniferum HOM05D007281 ORTHO05D009241 2.2e-34 150.6 199 45.7
SalBow7G4701 Salvia bowleyana HOM05D007281 ORTHO05D009241 2.2e-34 150.6 181 42.5
SGA_v2.0_scaffold70G23463 Striga asiatica HOM05D007281 ORTHO05D009241 1.9e-33 147.5 181 42.5
Aqoxy1G00179 Aquilegia oxysepala HOM05D007281 ORTHO05D009241 2.5e-33 147.1 185 42.7
EL10As1g23104 Beta vulgaris HOM05D007281 ORTHO05D009241 4.2e-33 146.4 209 41.6
Gohir.A04G105900 Gossypium hirsutum HOM05D007281 ORTHO05D009241 9.4e-33 145.2 181 43.6
arahy.Tifrunner.gnm1.ann1.JM9TK1 Arachis hypogaea HOM05D007281 ORTHO05D009241 1.4e-31 141.4 181 45.3
Gorai.012G131800 Gossypium raimondii HOM05D007281 ORTHO05D009241 6.7e-31 139.0 175 44.0
Gohir.D04G145700 Gossypium hirsutum HOM05D007281 ORTHO05D009241 8.8e-31 138.7 175 43.4
Ca_01535_v3 Cicer arietinum L. HOM05D007281 ORTHO05D009241 1.1e-30 138.3 199 42.2
AL1G23070 Arabidopsis lyrata HOM05D007281 ORTHO05D009241 1.5e-30 137.9 193 43.0
arahy.Tifrunner.gnm1.ann1.HBB9ZN Arachis hypogaea HOM05D001233 ORTHO05D009241 2.6e-30 137.1 187 43.3
PGR042G3246 Punica granatum HOM05D007281 ORTHO05D009241 2.6e-30 137.1 176 44.3
Hund01238 Selenicereus undatus HOM05D007281 ORTHO05D009241 5.7e-30 136.0 189 42.9
Duzib052G0115 Durio zibethinus HOM05D007281 ORTHO05D009241 7.4e-30 135.6 176 44.9
Thhalv10007999m.g Eutrema salsugineum HOM05D007281 ORTHO05D009241 1.3e-29 134.8 205 39.5
Ciclev10016159m.g Citrus clementina HOM05D007281 ORTHO05D009241 1.7e-29 134.4 138 52.2
HanXRQChr15g0488101 Helianthus annuus HOM05D007281 ORTHO05D009241 1.7e-29 134.4 188 37.8
Sed0007470 Sechium edule HOM05D007281 ORTHO05D009241 1.7e-29 134.4 209 42.1
CsaV3_1G014130 Cucumis sativus L. HOM05D007281 ORTHO05D009241 3.7e-29 133.3 207 42.5
Hund01235 Selenicereus undatus HOM05D007281 ORTHO05D009241 3.7e-29 133.3 189 41.8
Sp1g10520 Schrenkiella parvula HOM05D007281 ORTHO05D009241 6.3e-29 132.5 208 39.4
Carub.0001s1156 Capsella rubella HOM05D007281 ORTHO05D009241 1.4e-28 131.3 187 41.2
Ah.12g062420 Amaranthus hybridus HOM05D007281 ORTHO05D009241 1.8e-28 131.0 185 40.0
Lsat_1_v5_gn_4_69540 Lactuca sativa HOM05D007281 ORTHO05D009241 1.8e-28 131.0 177 40.1
Migut.M00334 Erythranthe guttata HOM05D007281 ORTHO05D009241 5.3e-28 129.4 175 41.7
C05p11270 Brassica napus HOM05D007281 ORTHO05D009241 6.9e-28 129.0 201 39.8
BolC5t29876H Brassica oleracea HOM05D007281 ORTHO05D009241 6.9e-28 129.0 201 39.8
Phvul.005G107600 Phaseolus vulgaris HOM05D007281 ORTHO05D009241 1.2e-27 128.3 197 42.1
arahy.Tifrunner.gnm1.ann1.F4A8JX Arachis hypogaea HOM05D007281 ORTHO05D009241 2.2e-26 124.0 139 48.2
A06p09560 Brassica napus HOM05D007281 ORTHO05D009241 3.8e-26 123.2 169 39.6
BcaC05g25243 Brassica carinata HOM05D007281 ORTHO05D009241 5.0e-26 122.9 203 37.9
BraA06t24146Z Brassica rapa HOM05D007281 ORTHO05D009241 5.0e-26 122.9 169 40.8
vmacro09292 Vaccinium macrocarpon HOM05D007281 ORTHO05D009241 5.0e-26 122.9 141 49.6
Lalb_Chr14g0366621 Lupinus albus HOM05D007281 ORTHO05D009241 6.5e-26 122.5 181 41.4
VMungo1080G1478 Vigna mungo HOM05D007281 ORTHO05D009241 8.5e-26 122.1 186 41.9
Medtr2g007050 Medicago truncatula HOM05D007281 ORTHO05D009241 1.1e-25 121.7 182 39.6
Medtr2g090030 Medicago truncatula HOM05D007281 ORTHO05D009241 1.1e-25 121.7 182 39.6
Aa31LG1G2830 Aethionema arabicum HOM05D007281 ORTHO05D009241 1.9e-25 120.9 185 39.5
CARHR012220 Cardamine hirsuta HOM05D007281 ORTHO05D009241 1.4e-23 114.8 171 40.4
PSO339G5345 Papaver somniferum HOM05D007281 ORTHO05D009241 1.4e-23 114.8 180 41.1
TPR.G27076 Trifolium pratense HOM05D007281 ORTHO05D009241 1.8e-23 114.4 171 40.4
Psat5g268080 Pisum sativum HOM05D007281 ORTHO05D009241 6.7e-23 112.5 194 38.7
AT1G11900 Arabidopsis thaliana HOM05D007281 ORTHO05D009241 6.3e-21 105.9 170 40.0
THA.LOC104809493 Tarenaya hassleriana HOM05D007281 ORTHO05D009241 6.3e-21 105.9 184 35.9
HPP92_019763 Vanilla planifolia HOM05D007281 ORTHO05D009241 2.4e-20 104.0 188 35.6
MD17G1084400 Malus domestica HOM05D007281 ORTHO05D009241 1.0e-18 98.6 173 36.4
Eucgr.A01777 Eucalyptus grandis HOM05D007281 ORTHO05D009241 1.3e-18 98.2 98 53.1
Prupe.3G231200 Prunus persica HOM05D007281 ORTHO05D009241 3.8e-18 96.7 155 37.4
ATR1127G094 Amborella trichopoda HOM05D007281 ORTHO05D009241 1.1e-17 95.1 160 36.9
RcHm_v2.0_Chr1g0342741 Rosa chinensis HOM05D007281 ORTHO05D009241 8.8e-15 85.5 149 37.6
FAN14G4544 Fragaria x ananassa HOM05D007281 ORTHO05D009241 1.3e-13 81.6 132 39.4
FvH4_6g44590 Fragaria vesca HOM05D007281 ORTHO05D009241 2.8e-13 80.5 132 38.6
FAN02G4278 Fragaria x ananassa HOM05D007281 ORTHO05D009241 3.7e-13 80.1 131 38.9
FvH4_6g24020 Fragaria vesca HOM05D007281 ORTHO05D009241 8.2e-13 79.0 128 40.6
FAN14G1737 Fragaria x ananassa HOM05D007281 ORTHO05D009241 8.2e-13 79.0 128 40.6
Os05g0481800 Oryza sativa ssp. japonica HOM05D007281 ORTHO05D009241 1.2e-11 75.1 117 35.0
Zm00001eb290940 Zea mays HOM05D007281 ORTHO05D009241 1.3e-10 71.6 121 35.5
Nn2g14540 Nelumbo nucifera HOM05D007281 ORTHO05D009241 4.2e-09 66.6 96 37.5
MD14G1065400 Malus domestica HOM05D007281 ORTHO05D009241 6.8e-07 59.3 52 57.7
Nn1g08105 Nelumbo nucifera HOM05D007281 ORTHO05D009241 8.8e-07 58.9 66 43.9
Glyma.12G201200 Glycine max HOM05D007281 ORTHO05D009241 3.4e-06 57.0 66 45.5


User provided reference genes

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