Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 8.7e-239 830.1 477 100.0
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 6.2e-221 770.8 477 91.4
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 3.7e-181 638.6 487 79.7
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 1.1e-177 627.1 487 78.4
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 1.2e-176 623.6 487 78.2
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 9.8e-174 614.0 485 77.1
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 1.3e-170 603.6 481 76.9
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 2.2e-133 479.9 494 62.3
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 5.8e-126 455.3 488 59.8
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 3.1e-119 433.0 526 55.1
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 1.2e-118 431.0 494 58.1
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 1.8e-114 417.2 481 56.8
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 2.0e-110 403.7 511 51.5
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 7.6e-110 401.7 495 54.9
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 9.9e-110 401.4 461 56.4
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 2.7e-107 393.3 500 50.8
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 6.0e-107 392.1 499 54.5
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 3.3e-105 386.3 493 54.2
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 2.1e-104 383.6 475 56.8
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 4.9e-101 372.5 492 51.4
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.8e-98 364.0 497 48.5
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 4.3e-97 359.4 508 54.7
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 5.3e-95 352.4 494 50.4
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 2.0e-94 350.5 496 47.6
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 5.9e-94 349.0 496 48.4
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.7e-93 347.4 488 48.8
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 2.9e-93 346.7 489 49.1
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 3.8e-93 346.3 498 48.0
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 8.5e-93 345.1 485 48.0
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 1.9e-92 344.0 495 47.3
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 2.5e-92 343.6 494 49.8
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 3.2e-92 343.2 496 48.0
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 4.2e-92 342.8 495 47.1
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 4.2e-92 342.8 490 48.8
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 1.6e-91 340.9 493 48.7
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 3.9e-90 336.3 495 49.9
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 6.7e-90 335.5 489 48.5
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 2.5e-89 333.6 492 49.0
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 9.7e-89 331.6 493 49.5
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 8.2e-88 328.6 494 48.8
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 8.2e-88 328.6 492 48.4
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 1.8e-87 327.4 490 47.3
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 5.3e-87 325.9 495 46.5
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 3.8e-85 319.7 486 47.1
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 3.8e-85 319.7 491 45.8
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 6.5e-85 318.9 500 49.8
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 1.4e-84 317.8 494 46.4
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 1.9e-84 317.4 494 47.4
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 5.5e-84 315.8 484 44.2
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 9.4e-84 315.1 494 46.2
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 7.9e-83 312.0 502 46.0
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.0e-82 311.6 494 46.0
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.8e-82 310.8 494 45.7
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 4.4e-81 306.2 496 48.0
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 5.7e-81 305.8 500 47.6
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 6.9e-79 298.9 487 49.7
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 1.2e-78 298.1 487 48.7
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 2.7e-75 287.0 444 46.6
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 3.9e-74 283.1 494 43.3
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 2.6e-73 280.4 503 41.4
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 2.6e-70 270.4 493 42.2
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 2.9e-69 266.9 493 41.6
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 1.1e-68 265.0 488 42.4
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 3.2e-68 263.5 478 42.9
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 4.2e-68 263.1 489 39.1
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 7.2e-68 262.3 482 41.9
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 1.2e-67 261.5 364 50.5
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 1.4e-66 258.1 477 43.8
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 2.3e-66 257.3 467 40.5
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 4.4e-65 253.1 497 41.6
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 4.8e-64 249.6 485 39.4
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 4.1e-63 246.5 491 42.6
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 5.9e-62 242.7 511 39.1
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 7.7e-62 242.3 491 41.5
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 2.2e-61 240.7 483 40.0
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 1.1e-60 238.4 511 39.7
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 2.5e-60 237.3 478 40.8
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 1.6e-59 234.6 480 39.0
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 1.0e-58 231.9 471 39.3
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 1.8e-58 231.1 450 39.1
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 4.0e-58 229.9 335 48.1
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 1.5e-57 228.0 484 39.7
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 3.4e-57 226.9 478 37.9
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 4.4e-57 226.5 493 40.8
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 3.7e-56 223.4 449 40.5
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 4.8e-56 223.0 478 40.8
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 1.1e-55 221.9 479 40.9
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 1.1e-55 221.9 478 40.6
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 2.0e-54 217.6 538 37.7
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 5.0e-53 213.0 501 39.3
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 2.0e-49 201.1 478 37.2
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 9.8e-49 198.7 499 36.3
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 3.7e-48 196.8 509 36.7
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 2.7e-46 190.7 510 36.3
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 6.6e-45 186.0 510 35.7
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 4.7e-43 179.9 409 38.4
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 4.7e-43 179.9 478 35.8
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 2.6e-41 174.1 470 34.3
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 1.3e-40 171.8 466 33.0
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 3.5e-38 163.7 469 32.8
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 6.6e-37 159.5 469 33.7
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 1.7e-32 144.8 406 34.0
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 8.3e-32 142.5 186 51.6
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 8.3e-32 142.5 156 55.1
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 3.2e-31 140.6 551 31.4
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 4.6e-30 136.7 397 35.0
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 1.3e-29 135.2 156 53.2
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 8.6e-29 132.5 166 51.8
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 1.5e-28 131.7 159 52.8
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 3.3e-28 130.6 495 30.9
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 6.8e-26 122.9 167 47.3
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 6.4e-24 116.3 173 42.8
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 8.3e-24 115.9 504 30.4
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 1.1e-20 105.5 482 29.5
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 1.4e-18 98.6 505 27.7
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 7.3e-12 76.3 91 51.6
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 2.8e-11 74.3 465 26.5
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 4.7e-11 73.6 490 25.7
Lsat_1_v5_gn_5_187260 Lactuca sativa HOM05D006426 ORTHO05D007737 6.9e-10 69.7 158 43.0
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 1.4e-07 62.0 65 47.7


User provided reference genes

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