Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.6e-94 349.4 165 100.0
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 5.0e-93 344.4 165 98.2
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 3.5e-86 321.6 161 91.9
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 5.9e-86 320.9 161 91.9
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 1.0e-85 320.1 161 91.9
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 1.0e-85 320.1 161 90.7
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 2.8e-80 302.0 161 84.5
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.1e-79 300.1 161 84.5
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 9.1e-79 297.0 158 85.4
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 3.5e-78 295.0 161 82.0
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 4.5e-78 294.7 159 81.8
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 4.5e-78 294.7 163 79.1
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 5.9e-78 294.3 162 84.6
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.3e-77 293.1 158 84.2
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 1.7e-77 292.7 159 82.4
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 5.0e-77 291.2 158 83.5
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 5.0e-77 291.2 162 81.5
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 5.0e-77 291.2 161 79.5
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 1.9e-76 289.3 158 81.6
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 2.5e-76 288.9 161 80.7
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 3.2e-76 288.5 157 81.5
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 4.2e-76 288.1 158 81.0
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 5.5e-76 287.7 158 80.4
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 7.2e-76 287.3 158 79.7
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 9.4e-76 287.0 161 80.1
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.2e-75 286.6 156 82.1
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 1.2e-75 286.6 156 82.1
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 1.6e-75 286.2 160 78.8
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.6e-75 286.2 158 79.1
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 2.1e-75 285.8 158 81.0
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.7e-75 285.4 149 86.6
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 2.7e-75 285.4 159 78.6
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 2.7e-75 285.4 156 82.7
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.6e-75 285.0 158 81.0
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 4.7e-75 284.6 163 76.1
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 4.7e-75 284.6 156 81.4
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 8.0e-75 283.9 161 77.0
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 8.0e-75 283.9 158 79.7
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 8.0e-75 283.9 161 79.5
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 1.0e-74 283.5 158 79.7
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 1.0e-74 283.5 161 77.0
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 1.0e-74 283.5 162 79.0
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 1.4e-74 283.1 161 76.4
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 2.3e-74 282.3 161 77.6
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.3e-74 282.3 157 81.5
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 3.0e-74 282.0 161 75.8
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 3.0e-74 282.0 160 78.8
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.0e-74 282.0 160 78.8
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.0e-74 282.0 160 78.8
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 3.0e-74 282.0 157 78.3
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.0e-74 282.0 158 79.7
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.0e-74 282.0 158 79.7
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 4.0e-74 281.6 161 75.2
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 4.0e-74 281.6 161 78.3
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 4.0e-74 281.6 161 76.4
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 5.2e-74 281.2 160 77.5
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 5.2e-74 281.2 161 78.3
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 6.8e-74 280.8 161 76.4
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 6.8e-74 280.8 163 74.2
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 6.8e-74 280.8 149 83.9
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 6.8e-74 280.8 158 77.8
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 8.8e-74 280.4 161 76.4
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.2e-73 280.0 158 79.7
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.5e-73 279.6 154 79.9
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 2.0e-73 279.3 161 75.2
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 2.6e-73 278.9 158 77.8
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 2.6e-73 278.9 158 77.8
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 4.4e-73 278.1 158 79.7
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 4.4e-73 278.1 155 80.6
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 9.8e-73 276.9 158 77.2
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 1.3e-72 276.6 158 78.5
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.2e-72 275.8 154 79.9
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 2.8e-72 275.4 171 71.3
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 3.7e-72 275.0 154 78.6
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 4.9e-72 274.6 169 72.2
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 1.8e-71 272.7 157 77.7
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 2.4e-71 272.3 148 79.7
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 2.4e-71 272.3 158 77.2
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 4.1e-71 271.6 158 76.6
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 5.4e-71 271.2 154 76.6
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 5.4e-71 271.2 154 76.0
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 9.2e-71 270.4 214 60.7
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 1.2e-70 270.0 135 92.6
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 1.6e-70 269.6 154 76.6
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 2.7e-70 268.9 162 74.1
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 2.7e-70 268.9 161 75.2
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 7.7e-70 267.3 162 73.5
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 3.8e-69 265.0 157 74.5
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 3.3e-68 261.9 161 71.4
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 4.3e-68 261.5 156 75.6
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 9.5e-68 260.4 161 75.2
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 1.6e-67 259.6 162 71.0
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.1e-67 259.2 161 70.8
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 3.6e-67 258.5 145 80.7
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 1.0e-66 256.9 148 77.0
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 3.0e-66 255.4 141 80.9
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 6.8e-66 254.2 158 75.3
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.9e-64 248.8 135 81.5
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 4.1e-63 245.0 138 77.5
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 1.0e-61 240.4 137 76.6
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 1.7e-61 239.6 155 67.7
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.8e-58 229.6 117 88.9
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 2.3e-58 229.2 138 75.4
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 2.6e-57 225.7 161 69.6
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 1.7e-56 223.0 152 68.4
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 8.3e-56 220.7 137 73.7
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 3.5e-54 215.3 114 84.2
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 3.0e-53 212.2 140 67.9
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 3.9e-53 211.8 121 81.0
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 3.9e-53 211.8 183 59.0
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 8.6e-53 210.7 116 82.8
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 4.3e-52 208.4 142 61.3
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 3.6e-51 205.3 149 60.4
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.3e-50 202.6 142 59.9
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 5.2e-50 201.4 159 61.6
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 8.3e-48 194.1 138 65.9
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 1.4e-47 193.4 152 61.2
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 1.3e-45 186.8 99 80.8
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 1.9e-44 183.0 95 85.3
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 6.8e-42 174.5 102 74.5
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 1.7e-37 159.8 158 55.1
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 3.9e-37 158.7 171 48.0
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 4.7e-35 151.8 85 81.2
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 6.2e-35 151.4 135 57.8
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 5.2e-34 148.3 86 77.9
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 9.6e-28 127.5 73 78.1
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 3.0e-21 105.9 52 90.4
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 2.0e-17 93.2 60 68.3
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 1.5e-09 67.0 71 46.5


User provided reference genes

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