Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002353g0090 Nicotiana tabacum HOM05D003173 ORTHO05D003546 1.5e-138 496.1 246 100.0
Nitab4.5_0000498g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 2.6e-130 468.8 247 94.7
PGSC0003DMG400029419 Solanum tuberosum HOM05D003173 ORTHO05D003546 2.0e-77 293.1 249 63.9
Sopen12g031280 Solanum pennellii HOM05D003173 ORTHO05D003546 1.7e-76 290.0 250 63.6
CAN.G401.21 Capsicum annuum HOM05D003173 ORTHO05D003546 1.4e-75 287.0 255 62.7
Solyc12g094390.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 2.7e-74 282.7 248 62.1
Peaxi162Scf00064g00081 Petunia axillaris HOM05D003173 ORTHO05D003546 9.2e-67 257.7 256 60.9
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 2.2e-52 209.9 251 52.2
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 2.9e-52 209.5 251 51.8
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 6.6e-49 198.4 251 52.2
PGSC0003DMG400009955 Solanum tuberosum HOM05D003173 ORTHO05D003546 3.6e-47 192.6 261 48.3
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 3.1e-46 189.5 259 49.0
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 4.1e-43 179.1 254 45.3
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 1.6e-42 177.2 261 44.4
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 4.6e-42 175.6 263 43.3
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.7e-41 173.7 249 46.2
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 6.6e-41 171.8 267 44.6
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 8.6e-41 171.4 268 46.6
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 1.9e-40 170.2 252 44.8
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 7.3e-40 168.3 261 46.0
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 1.2e-39 167.5 266 43.2
CSS0006148 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.4e-38 164.1 260 44.6
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 3.1e-38 162.9 274 44.2
Dinv31893 Davidia involucrata HOM05D003173 ORTHO05D003546 5.8e-37 158.7 251 45.4
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 9.9e-37 157.9 270 44.1
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 1.3e-36 157.5 272 42.6
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 2.2e-36 156.8 253 45.1
Nitab4.5_0003030g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 4.9e-36 155.6 210 51.0
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 4.9e-36 155.6 274 42.3
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 8.4e-36 154.8 262 43.1
MSTRG.24229 Avicennia marina HOM05D003173 ORTHO05D003546 2.4e-35 153.3 253 40.3
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.4e-35 153.3 272 41.9
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 5.4e-35 152.1 272 43.0
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 5.4e-35 152.1 258 43.0
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 7.1e-35 151.8 256 43.8
vmacro04379 Vaccinium macrocarpon HOM05D003173 ORTHO05D003546 1.0e-33 147.9 258 41.5
PGR031G0086 Punica granatum HOM05D003173 ORTHO05D003546 1.3e-33 147.5 285 38.6
Ca_13485_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 2.3e-33 146.7 264 39.8
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 3.0e-33 146.4 261 40.2
Migut.C00894 Erythranthe guttata HOM05D003173 ORTHO05D003546 3.9e-33 146.0 243 44.0
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 1.1e-32 144.4 255 42.4
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 1.5e-32 144.1 261 39.5
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 2.5e-32 143.3 261 39.8
CANSAT25G2829 Cannabis sativa HOM05D003173 ORTHO05D003546 3.3e-32 142.9 277 36.5
Ciclev10002153m.g Citrus clementina HOM05D003173 ORTHO05D003546 5.6e-32 142.1 274 39.8
arahy.Tifrunner.gnm1.ann1.WLLD0D Arachis hypogaea HOM05D003173 ORTHO05D003546 7.3e-32 141.7 275 37.8
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 7.3e-32 141.7 272 40.4
Sabra05G0189700 Salix brachista HOM05D003173 ORTHO05D003546 1.2e-31 141.0 260 39.6
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 1.6e-31 140.6 247 40.5
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 2.1e-31 140.2 254 42.9
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 2.8e-31 139.8 262 40.8
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 2.8e-31 139.8 261 39.1
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 6.2e-31 138.7 257 40.5
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 6.2e-31 138.7 275 37.5
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 8.1e-31 138.3 257 40.5
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 8.1e-31 138.3 251 42.2
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 8.1e-31 138.3 264 40.9
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 1.1e-30 137.9 259 40.5
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 1.1e-30 137.9 265 38.1
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 1.8e-30 137.1 267 41.2
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.8e-30 137.1 266 40.6
Hma1.2p1_0023F.1_g015790 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 2.4e-30 136.7 254 42.1
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 2.4e-30 136.7 251 40.6
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 3.1e-30 136.3 278 37.4
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 5.2e-30 135.6 259 39.4
Lalb_Chr19g0131611 Lupinus albus HOM05D003173 ORTHO05D003546 8.9e-30 134.8 295 36.9
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.2e-29 134.4 251 42.2
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 1.2e-29 134.4 251 42.2
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 2.0e-29 133.7 252 40.5
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 5.8e-29 132.1 250 39.6
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 9.9e-29 131.3 272 36.8
TPR.G38194 Trifolium pratense HOM05D003173 ORTHO05D003546 9.9e-29 131.3 256 40.2
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 1.3e-28 131.0 268 39.2
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 1.7e-28 130.6 249 38.2
Oeu051144.1 Olea europaea HOM05D003173 ORTHO05D003546 2.2e-28 130.2 264 40.5
Lsat_1_v5_gn_8_29221 Lactuca sativa HOM05D003173 ORTHO05D003546 2.9e-28 129.8 297 35.4
Glyma.04G020700 Glycine max HOM05D003173 ORTHO05D003546 3.8e-28 129.4 273 38.1
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 1.1e-27 127.9 263 38.8
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 2.4e-27 126.7 226 42.0
Psat5g012200 Pisum sativum HOM05D003173 ORTHO05D003546 3.2e-27 126.3 247 39.7
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 5.4e-27 125.6 248 39.9
Atru.chr13.216 Acer truncatum HOM05D003173 ORTHO05D003546 1.6e-26 124.0 296 36.5
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 2.7e-26 123.2 244 39.8
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 4.6e-26 122.5 283 37.8
TPR.G26427 Trifolium pratense HOM05D003173 ORTHO05D003546 4.6e-26 122.5 270 36.7
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 7.8e-26 121.7 279 37.3
FAN15G3480 Fragaria x ananassa HOM05D003173 ORTHO05D003546 1.0e-25 121.3 279 38.7
arahy.Tifrunner.gnm1.ann1.S3QWAM Arachis hypogaea HOM05D003173 ORTHO05D003546 1.3e-25 120.9 281 37.0
EL10Ac1g02082 Beta vulgaris HOM05D003173 ORTHO05D003546 1.7e-25 120.6 298 36.9
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 2.3e-25 120.2 252 38.5
arahy.Tifrunner.gnm1.ann1.YK013F Arachis hypogaea HOM05D003173 ORTHO05D003546 3.9e-25 119.4 281 35.2
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 3.9e-25 119.4 278 36.7
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 5.1e-25 119.0 278 37.1
Lsat_1_v5_gn_2_6961 Lactuca sativa HOM05D003173 ORTHO05D003546 5.1e-25 119.0 296 33.4
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 1.9e-24 117.1 256 37.1
ECA233G2815 Erigeron canadensis HOM05D003173 ORTHO05D003546 5.6e-24 115.5 284 33.1
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 2.1e-23 113.6 249 39.4
Oeu039861.1 Olea europaea HOM05D003173 ORTHO05D003546 4.8e-23 112.5 188 43.1
Oeu057579.1 Olea europaea HOM05D003173 ORTHO05D003546 4.8e-23 112.5 188 43.1
PSO541G5041 Papaver somniferum HOM05D003173 ORTHO05D003546 1.4e-22 110.9 257 35.8
Sc15g0004670 Simmondsia chinensis HOM05D003173 ORTHO05D003546 1.8e-22 110.5 253 36.0
Carub.0002s2296 Capsella rubella HOM05D003173 ORTHO05D003546 6.9e-22 108.6 272 36.0
Lalb_Chr08g0246301 Lupinus albus HOM05D003173 ORTHO05D003546 6.9e-22 108.6 172 38.4
SGA_v2.0_scaffold19G08585 Striga asiatica HOM05D003173 ORTHO05D003546 9.0e-22 108.2 253 36.8
ATR0661G366 Amborella trichopoda HOM05D003173 ORTHO05D003546 1.5e-21 107.5 265 34.7
HanXRQChr14g0428491 Helianthus annuus HOM05D003173 ORTHO05D003546 3.4e-21 106.3 279 35.5
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 5.8e-21 105.5 297 34.3
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 3.8e-20 102.8 251 35.1
Lalb_Chr03g0033561 Lupinus albus HOM05D003173 ORTHO05D003546 4.9e-20 102.4 269 33.5
BraA07t31692Z Brassica rapa HOM05D003173 ORTHO05D003546 4.2e-19 99.4 261 33.7
Hma1.2p1_1598F.1_g292960 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 9.3e-19 98.2 244 35.7
Sp1g18040 Schrenkiella parvula HOM05D003173 ORTHO05D003546 9.3e-19 98.2 261 32.6
THA.LOC104811444 Tarenaya hassleriana HOM05D003173 ORTHO05D003546 1.2e-18 97.8 269 33.8
BcaB07g32036 Brassica carinata HOM05D003173 ORTHO05D003546 2.1e-18 97.1 273 33.3
Thhalv10009337m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 2.1e-18 97.1 267 32.6
AT1G76070 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 4.6e-18 95.9 279 32.6
A07p15840 Brassica napus HOM05D003173 ORTHO05D003546 4.6e-18 95.9 266 34.2
BraA07t29310Z Brassica rapa HOM05D003173 ORTHO05D003546 4.6e-18 95.9 266 34.2
DCAR_025088 Daucus carota HOM05D003173 ORTHO05D003546 4.6e-18 95.9 281 34.2
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 4.6e-18 95.9 261 36.8
BcaC08g47100 Brassica carinata HOM05D003173 ORTHO05D003546 7.9e-18 95.1 266 33.8
Sp5g31190 Schrenkiella parvula HOM05D003173 ORTHO05D003546 7.9e-18 95.1 274 32.8
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 1.0e-17 94.7 237 34.6
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.3e-17 94.4 189 40.2
ECA238G0569 Erigeron canadensis HOM05D000315 ORTHO05D000527 3.0e-17 93.2 288 29.9
PSO675G7160 Papaver somniferum HOM05D003173 ORTHO05D003546 3.0e-17 93.2 262 33.6
Lj5g0013533 Lotus japonicus HOM05D003173 ORTHO05D003546 3.9e-17 92.8 270 32.2
BolC6t40040H Brassica oleracea HOM05D003173 ORTHO05D003546 5.1e-17 92.4 263 32.7
BolC7t42850H Brassica oleracea HOM05D003173 ORTHO05D003546 8.7e-17 91.7 270 33.3
DCAR_009512 Daucus carota HOM05D003173 ORTHO05D003546 1.1e-16 91.3 268 33.6
A07p41630 Brassica napus HOM05D003173 ORTHO05D003546 1.5e-16 90.9 264 31.8
HPP92_002481 Vanilla planifolia HOM05D003173 ORTHO05D003546 1.5e-16 90.9 257 29.6
Lalb_Chr01g0008491 Lupinus albus HOM05D003173 ORTHO05D003546 1.9e-16 90.5 254 30.7
BraA02t07073Z Brassica rapa HOM05D003173 ORTHO05D003546 2.5e-16 90.1 260 32.3
A07p15740 Brassica napus HOM05D003173 ORTHO05D003546 3.3e-16 89.7 234 35.0
AL2G36110 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 7.4e-16 88.6 276 32.2
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 7.4e-16 88.6 175 40.6
BcaC08g47302 Brassica carinata HOM05D003173 ORTHO05D003546 9.6e-16 88.2 257 32.7
PGR102G2057 Punica granatum HOM05D003173 ORTHO05D003546 9.6e-16 88.2 269 34.2
BcaNung03372 Brassica carinata HOM05D003173 ORTHO05D003546 1.3e-15 87.8 269 32.7
A02p20410 Brassica napus HOM05D003173 ORTHO05D003546 1.3e-15 87.8 256 31.2
C07p23130 Brassica napus HOM05D003173 ORTHO05D003546 1.3e-15 87.8 269 32.7
CARHR069610 Cardamine hirsuta HOM05D003173 ORTHO05D003546 1.3e-15 87.8 262 33.2
C02p33480 Brassica napus HOM05D003173 ORTHO05D003546 2.8e-15 86.7 256 31.2
unitig_32.g11393 Utricularia gibba HOM05D002221 ORTHO05D002626 2.8e-15 86.7 193 31.6
A06p16390 Brassica napus HOM05D003173 ORTHO05D003546 4.8e-15 85.9 266 32.3
BolC2t09356H Brassica oleracea HOM05D003173 ORTHO05D003546 4.8e-15 85.9 256 31.2
Ca_15466_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 4.8e-15 85.9 122 48.4
BraA06t24743Z Brassica rapa HOM05D003173 ORTHO05D003546 6.2e-15 85.5 266 32.0
GSVIVG01008738001 Vitis vinifera HOM05D003173 ORTHO05D003546 8.1e-15 85.1 171 40.9
BcaC03g15643 Brassica carinata HOM05D003173 ORTHO05D003546 1.1e-14 84.7 256 30.9
BcaB03g14324 Brassica carinata HOM05D003173 ORTHO05D003546 3.1e-14 83.2 262 30.2
Sed0006911 Sechium edule HOM05D003173 ORTHO05D003546 1.2e-13 81.3 236 35.2
BolC5t30588H Brassica oleracea HOM05D003173 ORTHO05D003546 1.5e-13 80.9 270 30.4
Carub.0001s1981 Capsella rubella HOM05D003173 ORTHO05D003546 1.5e-13 80.9 270 29.3
Thhalv10018992m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 1.5e-13 80.9 274 31.4
BcaC05g25935 Brassica carinata HOM05D003173 ORTHO05D003546 2.0e-13 80.5 267 30.7
C05p18890 Brassica napus HOM05D003173 ORTHO05D003546 2.0e-13 80.5 267 30.7
AT1G20310 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 3.4e-13 79.7 269 30.9
AL1G33140 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 9.9e-13 78.2 228 29.4
BcaB05g24968 Brassica carinata HOM05D003173 ORTHO05D003546 1.3e-12 77.8 254 30.3
unitig_748.g7605 Utricularia gibba HOM05D003173 ORTHO05D003546 1.7e-12 77.4 182 35.7
Os09g0542900 Oryza sativa ssp. japonica HOM05D003173 ORTHO05D003546 3.8e-12 76.3 231 29.4
Potri.005G107500 Populus trichocarpa HOM05D003173 ORTHO05D003546 1.4e-11 74.3 246 26.0
Zm00001eb103980 Zea mays HOM05D003173 ORTHO05D003546 1.4e-11 74.3 235 29.4
CARHR020790 Cardamine hirsuta HOM05D003173 ORTHO05D003546 1.9e-11 73.9 269 28.6
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 3.2e-11 73.2 248 30.2
Aa31LG4G6190 Aethionema arabicum HOM05D003173 ORTHO05D003546 5.5e-11 72.4 282 29.1
CDE05G2702 Ceratophyllum demersum HOM05D003173 ORTHO05D003546 9.3e-11 71.6 196 32.7
COL.COLO4_22498 Corchorus olitorius HOM05D003173 ORTHO05D003546 2.1e-10 70.5 183 35.5
SHI05037 Sapria himalayana HOM05D003173 ORTHO05D003546 4.6e-10 69.3 214 31.3
BcaC08g47295 Brassica carinata HOM05D003173 ORTHO05D003546 6.0e-10 68.9 98 40.8
SHI08021 Sapria himalayana HOM05D003173 ORTHO05D003546 6.0e-10 68.9 214 31.3
Ah.00g000650 Amaranthus hybridus HOM05D003173 ORTHO05D003546 7.9e-10 68.6 118 37.3
SHI13075 Sapria himalayana HOM05D003173 ORTHO05D003546 2.3e-09 67.0 214 30.8
C06p50010 Brassica napus HOM05D003173 ORTHO05D003546 5.6e-08 62.4 202 31.2
HanXRQChr12g0366681 Helianthus annuus HOM05D003173 ORTHO05D003546 2.1e-07 60.5 202 30.2
Aa31LG7G4670 Aethionema arabicum HOM05D003173 ORTHO05D003546 2.8e-07 60.1 212 32.1
Gohir.A12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.8e-07 60.1 183 32.2
MBI17_g07971_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 3.7e-07 59.7 215 27.4
Gohir.D12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 8.1e-07 58.5 242 28.9
TWI73G0798 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 8.1e-07 58.5 262 29.4
Medtr8g074760 Medicago truncatula HOM05D003173 ORTHO05D003546 2.4e-06 57.0 178 35.4
Gorai.008G061700 Gossypium raimondii HOM05D003173 ORTHO05D003546 3.1e-06 56.6 249 28.5
Zm00001eb331720 Zea mays HOM05D003173 ORTHO05D003546 3.1e-06 56.6 218 30.3
SEGI_07401 Sequoiadendron giganteum HOM05D003173 ORTHO05D385206 5.3e-06 55.8 230 26.5


User provided reference genes

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