Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 5.9e-106 387.5 191 100.0
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.4e-99 365.5 193 94.3
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 1.4e-78 296.6 192 74.0
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 1.4e-78 296.6 191 74.9
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 4.0e-78 295.0 191 74.3
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 2.0e-77 292.7 191 73.8
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 8.4e-76 287.3 189 71.4
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 2.4e-75 285.8 189 74.6
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 7.8e-74 280.8 189 70.9
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 1.0e-73 280.4 189 68.8
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 1.7e-73 279.6 189 71.4
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 3.0e-73 278.9 190 72.1
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 3.9e-73 278.5 189 70.9
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 1.1e-72 276.9 191 66.0
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 1.1e-72 276.9 189 66.7
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.9e-72 276.2 189 69.8
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 1.3e-71 273.5 189 65.6
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 2.1e-71 272.7 191 66.5
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 2.8e-71 272.3 189 67.2
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 2.8e-71 272.3 189 66.7
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 6.2e-71 271.2 189 66.7
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 6.2e-71 271.2 189 66.7
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 8.1e-71 270.8 189 66.7
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 1.4e-70 270.0 189 65.6
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 1.4e-70 270.0 189 67.2
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 2.4e-70 269.2 189 64.0
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 3.1e-70 268.9 189 65.6
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 3.1e-70 268.9 189 64.6
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 3.1e-70 268.9 189 65.6
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 5.3e-70 268.1 189 61.9
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 6.9e-70 267.7 189 66.1
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 2.0e-69 266.2 189 65.6
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.0e-69 266.2 189 64.0
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 2.6e-69 265.8 189 64.6
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 2.6e-69 265.8 189 64.6
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 2.6e-69 265.8 189 64.6
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 2.6e-69 265.8 189 65.1
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 3.4e-69 265.4 189 66.1
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 3.4e-69 265.4 191 63.4
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 3.4e-69 265.4 189 64.0
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 4.5e-69 265.0 189 62.4
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 7.6e-69 264.2 189 65.1
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 7.6e-69 264.2 189 64.0
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 9.9e-69 263.8 189 65.6
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 1.3e-68 263.5 189 62.4
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 1.3e-68 263.5 189 64.6
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 1.7e-68 263.1 191 64.4
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 1.7e-68 263.1 189 64.0
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 1.7e-68 263.1 189 64.6
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 2.9e-68 262.3 189 64.6
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.9e-68 262.3 189 64.0
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 2.9e-68 262.3 189 64.0
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 3.8e-68 261.9 191 64.4
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 3.8e-68 261.9 189 64.6
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 3.8e-68 261.9 189 63.5
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 3.8e-68 261.9 189 63.0
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 4.9e-68 261.5 191 63.4
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 6.4e-68 261.2 191 63.4
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 6.4e-68 261.2 191 63.4
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 6.4e-68 261.2 189 61.9
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 8.4e-68 260.8 191 63.4
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 8.4e-68 260.8 191 63.4
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 8.4e-68 260.8 189 63.5
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 1.1e-67 260.4 189 63.0
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 1.1e-67 260.4 180 65.0
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 1.1e-67 260.4 189 63.0
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 1.4e-67 260.0 189 63.5
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 1.9e-67 259.6 189 65.1
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.9e-67 259.6 184 68.5
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 1.9e-67 259.6 189 64.0
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.4e-67 259.2 189 64.6
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 2.4e-67 259.2 189 63.0
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 3.2e-67 258.8 189 65.1
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 4.2e-67 258.5 189 62.4
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 5.4e-67 258.1 189 64.6
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 7.1e-67 257.7 191 61.8
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 9.3e-67 257.3 189 63.0
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 9.3e-67 257.3 189 61.4
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 1.6e-66 256.5 189 65.1
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 3.5e-66 255.4 189 63.0
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 3.5e-66 255.4 189 62.4
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 4.6e-66 255.0 189 62.4
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 4.6e-66 255.0 189 63.5
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 7.9e-66 254.2 189 60.8
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 7.9e-66 254.2 189 60.8
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 1.3e-65 253.4 189 63.0
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 2.3e-65 252.7 189 60.8
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 2.3e-65 252.7 189 63.5
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 2.3e-65 252.7 189 60.8
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 5.1e-65 251.5 189 60.8
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 6.7e-65 251.1 177 63.3
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 3.3e-64 248.8 189 64.6
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 5.6e-64 248.1 189 61.4
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 7.4e-64 247.7 191 60.2
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 8.1e-63 244.2 187 60.4
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 1.4e-62 243.4 180 62.2
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 1.4e-62 243.4 189 62.4
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.8e-62 243.0 189 59.8
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.8e-62 243.0 189 59.8
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 2.4e-62 242.7 189 61.9
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 4.0e-62 241.9 189 59.8
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.2e-61 240.4 193 60.1
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 1.5e-61 240.0 189 57.1
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 3.4e-61 238.8 183 66.1
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 7.6e-61 237.7 184 63.0
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.3e-60 236.9 189 56.1
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.7e-60 236.5 180 66.7
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 1.7e-60 236.5 177 62.1
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 3.8e-60 235.3 189 59.3
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 6.4e-60 234.6 189 57.1
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.1e-59 233.8 189 57.7
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 1.1e-59 233.8 189 58.2
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 1.4e-59 233.4 189 57.1
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 1.9e-59 233.0 189 58.7
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 1.9e-59 233.0 180 65.6
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 3.2e-59 232.3 189 56.6
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 3.2e-59 232.3 189 57.1
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 4.2e-59 231.9 180 64.4
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.2e-58 230.3 189 58.2
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 2.7e-58 229.2 180 63.9
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 4.6e-58 228.4 190 58.9
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 6.0e-58 228.0 188 56.9
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 7.9e-58 227.6 189 55.6
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 1.1e-56 223.8 180 56.7
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.5e-56 222.6 184 59.8
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 4.3e-56 221.9 189 53.4
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 7.4e-56 221.1 189 56.6
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 2.4e-54 216.1 180 61.7
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 5.3e-54 214.9 154 65.6
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 1.2e-53 213.8 183 56.3
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 1.5e-53 213.4 189 54.5
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 4.5e-53 211.8 185 51.9
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 8.4e-52 207.6 180 51.7
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 1.1e-51 207.2 180 51.7
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 1.9e-51 206.5 180 51.7
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 3.2e-51 205.7 182 54.9
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.1e-50 203.0 185 49.7
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.7e-50 202.6 187 50.8
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 4.6e-50 201.8 180 50.0
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 4.6e-50 201.8 180 50.0
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 1.0e-49 200.7 191 51.3
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 3.0e-49 199.1 189 51.3
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 3.9e-49 198.7 189 49.2
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 6.7e-49 198.0 189 50.3
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 1.9e-48 196.4 189 49.2
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.5e-48 196.1 184 55.4
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 5.7e-48 194.9 193 47.2
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 7.4e-48 194.5 189 52.4
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 2.1e-47 193.0 184 47.8
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 3.7e-47 192.2 189 51.3
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 5.9e-45 184.9 189 49.2
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 2.3e-41 172.9 110 71.8
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.8e-39 166.0 124 61.3
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 7.7e-37 157.9 190 44.2
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.0e-36 157.5 133 55.6
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 2.5e-35 152.9 126 57.1
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 1.1e-32 144.1 172 41.9
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 7.4e-32 141.4 106 65.1
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 8.2e-31 137.9 106 61.3
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 4.5e-29 132.1 109 59.6
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 1.7e-28 130.2 92 63.0
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 2.2e-28 129.8 187 41.2
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 1.0e-25 120.9 99 58.6
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 1.0e-25 120.9 89 57.3
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 1.7e-23 113.6 75 70.7
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 1.6e-18 97.1 77 64.9
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 6.7e-17 91.7 81 49.4
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 1.5e-16 90.5 80 52.5
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 4.8e-15 85.5 59 67.8
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 4.1e-14 82.4 76 48.7
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 5.9e-13 78.6 182 30.8
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 1.0e-12 77.8 177 30.5
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 1.1e-11 74.3 67 49.3
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 4.7e-10 68.9 73 50.7
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 8.0e-10 68.2 49 61.2


User provided reference genes

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