Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 2.6e-289 998.0 524 100.0
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 2.0e-281 971.8 524 97.5
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 2.6e-260 901.7 524 89.1
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 1.4e-258 896.0 524 88.9
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 7.6e-212 740.7 524 73.1
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 4.2e-202 708.4 524 69.5
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 4.0e-197 691.8 527 69.3
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 3.7e-190 668.7 527 68.1
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 1.4e-189 666.8 642 58.3
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 1.4e-186 656.8 542 65.9
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 2.5e-186 656.0 527 66.8
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.0e-184 650.6 527 64.1
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 1.3e-184 650.2 527 65.3
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 2.5e-183 646.0 525 65.0
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 7.4e-183 644.4 527 63.4
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 3.7e-182 642.1 527 65.1
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 3.7e-182 642.1 525 64.2
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 9.1e-181 637.5 527 64.3
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 1.2e-180 637.1 539 64.9
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 5.9e-180 634.8 520 64.6
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 1.3e-179 633.6 527 63.8
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 1.7e-179 633.3 522 64.6
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 2.9e-179 632.5 551 63.2
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 3.8e-179 632.1 551 63.2
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 1.9e-178 629.8 527 64.7
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 1.9e-178 629.8 527 62.4
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 7.2e-178 627.9 527 63.4
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 1.2e-177 627.1 525 61.7
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 2.7e-177 625.9 525 61.9
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 2.7e-177 625.9 526 62.9
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 3.6e-177 625.5 527 62.6
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 4.6e-177 625.2 525 63.2
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 4.6e-177 625.2 530 64.2
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 4.6e-177 625.2 530 64.2
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 1.4e-176 623.6 539 61.8
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 5.1e-176 621.7 526 61.4
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 8.8e-176 620.9 563 61.1
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 8.8e-176 620.9 527 62.8
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 8.8e-176 620.9 525 61.5
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 1.5e-175 620.2 527 62.8
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 2.0e-175 619.8 528 61.4
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 4.4e-175 618.6 527 62.6
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 1.3e-174 617.1 523 62.9
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 1.7e-174 616.7 526 62.4
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 1.1e-173 614.0 530 61.9
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 1.1e-173 614.0 524 61.5
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 1.1e-173 614.0 529 61.8
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 1.5e-172 610.1 528 61.4
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 2.6e-172 609.4 498 64.7
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 4.5e-172 608.6 572 57.9
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 1.3e-171 607.1 530 60.9
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 2.2e-171 606.3 528 62.3
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 4.2e-170 602.1 527 62.2
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 3.6e-169 599.0 523 61.6
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 4.7e-169 598.6 526 60.8
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 5.7e-167 591.7 540 60.2
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 4.8e-166 588.6 527 58.3
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 3.5e-164 582.4 525 59.8
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 1.7e-163 580.1 328 92.1
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 8.5e-163 577.8 527 58.8
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 1.9e-162 576.6 574 56.8
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 2.1e-161 573.2 526 57.6
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 8.0e-161 571.2 327 90.8
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 1.0e-160 570.9 527 57.3
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 4.0e-160 568.9 526 57.2
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 1.2e-156 557.4 524 58.2
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 1.0e-155 554.3 464 64.2
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 9.4e-154 547.7 445 64.3
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 8.0e-153 544.7 527 56.2
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 8.3e-150 534.6 527 56.5
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 7.0e-149 531.6 519 54.3
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 1.0e-147 527.7 519 54.1
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 2.3e-147 526.6 519 53.9
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 6.1e-145 518.5 521 55.1
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 1.4e-144 517.3 525 56.2
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 6.8e-144 515.0 519 53.4
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 1.3e-142 510.8 523 54.3
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 7.0e-141 505.0 519 52.4
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 1.2e-140 504.2 528 54.0
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 1.2e-140 504.2 519 52.0
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 4.3e-138 495.7 419 64.2
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 8.0e-137 491.5 463 57.5
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 8.0e-137 491.5 530 51.1
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 1.4e-136 490.7 545 50.3
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 4.0e-136 489.2 530 50.0
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 5.2e-136 488.8 546 49.8
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 9.8e-135 484.6 515 50.1
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 3.7e-134 482.6 389 65.8
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 6.6e-131 471.9 519 50.7
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 1.6e-129 467.2 451 57.0
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 1.8e-128 463.8 515 48.3
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 2.1e-121 440.3 407 60.4
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 2.0e-119 433.7 392 59.2
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.3e-107 394.4 554 44.0
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 8.7e-107 391.7 524 45.4
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 9.9e-103 378.3 290 66.6
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 9.9e-103 378.3 290 66.6
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 3.1e-96 356.7 516 44.8
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 2.4e-93 347.1 181 93.9
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 1.4e-88 331.3 515 39.2
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 2.2e-78 297.4 523 36.7
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 6.0e-76 289.3 163 92.0
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 3.0e-75 287.0 351 49.9
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 4.1e-72 276.6 539 34.5
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 8.5e-70 268.9 236 62.7
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 4.2e-69 266.5 198 69.2
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 1.9e-66 257.7 269 55.4
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 1.4e-53 214.9 287 48.8
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 1.4e-51 208.4 172 61.0
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 2.2e-49 201.1 461 32.3
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 3.1e-48 197.2 229 48.9
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 2.3e-35 154.5 113 68.1
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 3.4e-34 150.6 106 70.8
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 2.0e-31 141.4 290 35.5
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 2.3e-22 111.3 124 50.0
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.9e-21 108.2 156 41.7
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 2.9e-17 94.4 135 42.2
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 1.4e-16 92.0 101 52.5
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 5.2e-11 73.6 95 49.5
Cre05.g246300 Chlamydomonas reinhardtii HOM05D005607 ORTHO05D008142 7.5e-10 69.7 216 27.8
MELO3C030698.2 Cucumis melo HOM05D005607 ORTHO05D169846 5.1e-06 57.0 130 36.9


User provided reference genes

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