Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002329g0210 Nicotiana tabacum HOM05D001147 ORTHO05D000823 2.4e-159 565.5 283 100.0
Nitab4.5_0008310g0040 Nicotiana tabacum HOM05D001147 ORTHO05D000823 2.0e-134 482.6 279 86.4
Peaxi162Scf00062g00112 Petunia axillaris HOM05D001147 ORTHO05D000823 7.2e-92 341.3 302 63.6
PGSC0003DMG400007910 Solanum tuberosum HOM05D001147 ORTHO05D000823 5.6e-68 261.9 285 57.2
Peaxi162Scf01313g00232 Petunia axillaris HOM05D001147 ORTHO05D000823 4.4e-65 252.3 296 50.3
Peaxi162Scf01313g00230 Petunia axillaris HOM05D001147 ORTHO05D000823 1.4e-63 247.3 318 48.4
Sopen12g004780 Solanum pennellii HOM05D001147 ORTHO05D000823 4.1e-63 245.7 286 53.8
Nitab4.5_0003551g0080 Nicotiana tabacum HOM05D001147 ORTHO05D000823 9.2e-63 244.6 319 47.3
Solyc12g009900.3 Solanum lycopersicum HOM05D001147 ORTHO05D000823 4.6e-62 242.3 286 52.8
Nitab4.5_0011991g0010 Nicotiana tabacum HOM05D001147 ORTHO05D000823 8.6e-61 238.0 319 46.7
CAN.G551.65 Capsicum annuum HOM05D001147 ORTHO05D000823 2.1e-59 233.4 325 47.7
CAN.G160.1 Capsicum annuum HOM05D001147 ORTHO05D000823 1.1e-55 221.1 320 45.0
Solyc11g020850.3 Solanum lycopersicum HOM05D001147 ORTHO05D000823 2.4e-55 219.9 318 45.0
Sopen11g011020 Solanum pennellii HOM05D001147 ORTHO05D000823 5.4e-55 218.8 319 44.2
Solyc07g005910.3 Solanum lycopersicum HOM05D001147 ORTHO05D000823 2.3e-53 213.4 321 44.5
Sopen07g002040 Solanum pennellii HOM05D001147 ORTHO05D000823 6.6e-53 211.8 321 43.6
PGSC0003DMG400009262 Solanum tuberosum HOM05D001147 ORTHO05D000823 3.3e-52 209.5 318 43.1
PGSC0003DMG400011151 Solanum tuberosum HOM05D001147 ORTHO05D000823 5.6e-52 208.8 319 44.5
Cc06_g14570 Coffea canephora HOM05D001147 ORTHO05D000823 9.3e-39 164.9 304 36.8
Dinv42826 Davidia involucrata HOM05D001147 ORTHO05D000823 6.7e-37 158.7 328 36.6
Dinv43274 Davidia involucrata HOM05D001147 ORTHO05D000823 6.7e-37 158.7 328 36.6
Dinv41347 Davidia involucrata HOM05D001147 ORTHO05D000823 4.8e-35 152.5 319 36.1
Actinidia38663 Actinidia chinensis HOM05D001147 ORTHO05D000823 1.5e-33 147.5 309 35.0
Actinidia26812 Actinidia chinensis HOM05D001147 ORTHO05D000823 2.0e-33 147.1 308 34.7
Lj9C720G1 Lonicera japonica HOM05D001147 ORTHO05D000823 4.5e-33 146.0 309 32.7
vmacro06057 Vaccinium macrocarpon HOM05D001147 ORTHO05D000823 6.4e-32 142.1 322 34.2
Oeu021339.1 Olea europaea HOM05D001147 ORTHO05D000823 9.3e-31 138.3 345 33.3
DCAR_014802 Daucus carota HOM05D001147 ORTHO05D000823 1.2e-30 137.9 330 33.0
MSTRG.26260 Avicennia marina HOM05D001147 ORTHO05D000823 3.8e-24 116.3 351 30.8
ECA234G2552 Erigeron canadensis HOM05D001522 ORTHO05D001547 4.2e-23 112.8 293 31.1
MSTRG.6159 Avicennia marina HOM05D001147 ORTHO05D000823 1.2e-22 111.3 346 29.2
QL02p093985 Quercus lobata HOM05D001147 ORTHO05D000823 1.6e-22 110.9 311 29.9
SalBow1G4907 Salvia bowleyana HOM05D001147 ORTHO05D000823 1.6e-22 110.9 320 30.6
Atru.chr7.337 Acer truncatum HOM05D001147 ORTHO05D000823 4.6e-22 109.4 320 28.4
CSS0011357 Camellia sinensis var. sinensis HOM05D001147 ORTHO05D000823 6.0e-22 109.0 292 32.9
DCAR_019416 Daucus carota HOM05D001147 ORTHO05D000823 5.1e-21 105.9 306 30.4
CiPaw.16G107300 Carya illinoinensis HOM05D001147 ORTHO05D000823 1.5e-20 104.4 305 29.5
TAR626G1737 Trochodendron aralioides HOM05D001147 ORTHO05D000823 1.5e-20 104.4 343 28.6
ECA236G3004 Erigeron canadensis HOM05D001147 ORTHO05D000823 2.5e-20 103.6 313 30.7
MSTRG.10712 Avicennia marina HOM05D001147 ORTHO05D000823 1.6e-19 100.9 319 30.4
Cpa.g.sc46.192 Carica papaya HOM05D001147 ORTHO05D000823 2.2e-19 100.5 331 29.3
Potri.018G103500 Populus trichocarpa HOM05D001147 ORTHO05D000823 2.2e-19 100.5 319 29.2
Sabra18G0089000 Salix brachista HOM05D002983 ORTHO05D003451 3.7e-19 99.8 329 28.9
Haze_19151 Corylus avellana HOM05D001147 ORTHO05D000823 8.2e-19 98.6 333 27.6
Migut.J01385 Erythranthe guttata HOM05D001147 ORTHO05D000823 1.4e-18 97.8 298 29.5
Lsat_1_v5_gn_8_64600 Lactuca sativa HOM05D001147 ORTHO05D000823 3.1e-18 96.7 280 31.1
HanXRQChr12g0357791 Helianthus annuus HOM05D001147 ORTHO05D000823 5.3e-18 95.9 291 29.9
GSVIVG01023657001 Vitis vinifera HOM05D001147 ORTHO05D000823 9.0e-18 95.1 240 31.7
Ciclev10010396m.g Citrus clementina HOM05D001147 ORTHO05D000823 1.2e-17 94.7 328 29.3
CANSAT11G0976 Cannabis sativa HOM05D001147 ORTHO05D000823 2.0e-17 94.0 300 27.7
Manes.14G142200 Manihot esculenta HOM05D001147 ORTHO05D000823 2.6e-17 93.6 281 29.2
Potri.006G181300 Populus trichocarpa HOM05D001147 ORTHO05D000823 2.6e-17 93.6 289 27.0
PGR102G2166 Punica granatum HOM05D001147 ORTHO05D000823 3.4e-17 93.2 283 30.4
Sabra06G0138200 Salix brachista HOM05D001147 ORTHO05D000823 7.7e-17 92.0 313 26.5
Thecc.09G153000 Theobroma cacao HOM05D001147 ORTHO05D000823 7.7e-17 92.0 297 29.3
EL10Ac8g18921 Beta vulgaris HOM05D001147 ORTHO05D000823 1.3e-16 91.3 273 29.3
Sed0005842 Sechium edule HOM05D001147 ORTHO05D000823 2.2e-16 90.5 299 27.4
SGA_v2.0_scaffold265G46086 Striga asiatica HOM05D001147 ORTHO05D000823 2.2e-16 90.5 208 31.2
Medtr4g130400 Medicago truncatula HOM05D001147 ORTHO05D000823 2.9e-16 90.1 305 27.5
TWI34G0284 Tripterygium wilfordii HOM05D001147 ORTHO05D000823 2.9e-16 90.1 330 26.7
Glyma.17G071800 Glycine max HOM05D001147 ORTHO05D000823 6.5e-16 89.0 292 29.1
C09p49730 Brassica napus HOM05D001147 ORTHO05D000823 1.4e-15 87.8 223 32.3
Manes.06G031400 Manihot esculenta HOM05D001147 ORTHO05D000823 1.9e-15 87.4 283 28.3
C02p13810 Brassica napus HOM05D001147 ORTHO05D000823 2.5e-15 87.0 226 29.6
Glyma.02G206200 Glycine max HOM05D001147 ORTHO05D000823 2.5e-15 87.0 295 27.1
Ah.09g228730 Amaranthus hybridus HOM05D001147 ORTHO05D000823 3.2e-15 86.7 281 28.1
AL8G33880 Arabidopsis lyrata HOM05D001147 ORTHO05D000823 3.2e-15 86.7 232 29.7
arahy.Tifrunner.gnm1.ann1.IW6P38 Arachis hypogaea HOM05D001147 ORTHO05D000823 3.2e-15 86.7 306 26.5
BcaC04g19923 Brassica carinata HOM05D001147 ORTHO05D000823 3.2e-15 86.7 224 31.2
BolC9t57824H Brassica oleracea HOM05D001147 ORTHO05D000823 3.2e-15 86.7 224 31.2
MD15G1149000 Malus domestica HOM05D001147 ORTHO05D000823 4.2e-15 86.3 370 25.4
arahy.Tifrunner.gnm1.ann1.BQXN30 Arachis hypogaea HOM05D001147 ORTHO05D000823 5.5e-15 85.9 306 26.5
A10p15210 Brassica napus HOM05D001147 ORTHO05D000823 5.5e-15 85.9 224 30.8
BolC2t07500H Brassica oleracea HOM05D001147 ORTHO05D000823 5.5e-15 85.9 304 26.6
BraA10t43604Z Brassica rapa HOM05D001147 ORTHO05D000823 5.5e-15 85.9 224 30.8
Eucgr.C02510 Eucalyptus grandis HOM05D001147 ORTHO05D000823 7.2e-15 85.5 308 28.6
HanXRQChr05g0141651 Helianthus annuus HOM05D001147 ORTHO05D000823 9.4e-15 85.1 287 29.3
Lj6g0023022 Lotus japonicus HOM05D001147 ORTHO05D000823 9.4e-15 85.1 324 26.2
Aqoxy7G02387 Aquilegia oxysepala HOM05D001147 ORTHO05D000823 1.2e-14 84.7 348 25.0
COL.COLO4_23938 Corchorus olitorius HOM05D001147 ORTHO05D000823 1.2e-14 84.7 277 29.6
Gohir.A08G236000 Gossypium hirsutum HOM05D001147 ORTHO05D000823 1.2e-14 84.7 237 30.4
Lalb_Chr11g0072491 Lupinus albus HOM05D001147 ORTHO05D000823 1.2e-14 84.7 333 27.0
Sed0026266 Sechium edule HOM05D001147 ORTHO05D000823 1.6e-14 84.3 244 29.5
Aa31LG3G13670 Aethionema arabicum HOM05D001147 ORTHO05D000823 2.1e-14 84.0 231 29.4
SalBow1G7781 Salvia bowleyana HOM05D001147 ORTHO05D000823 2.1e-14 84.0 341 24.9
Ah.14g084510 Amaranthus hybridus HOM05D003886 ORTHO05D004587 2.7e-14 83.6 270 30.4
Carub.0008s1836 Capsella rubella HOM05D001147 ORTHO05D000823 3.6e-14 83.2 229 29.3
CARHR271570 Cardamine hirsuta HOM05D001147 ORTHO05D000823 3.6e-14 83.2 210 30.5
Thhalv10013794m.g Eutrema salsugineum HOM05D001147 ORTHO05D000823 6.1e-14 82.4 233 31.8
Lj4g0012991 Lotus japonicus HOM05D001147 ORTHO05D000823 6.1e-14 82.4 317 27.1
Nn8g40006 Nelumbo nucifera HOM05D001147 ORTHO05D000823 6.1e-14 82.4 283 27.9
AT5G57830 Arabidopsis thaliana HOM05D001147 ORTHO05D000823 7.9e-14 82.0 229 28.4
ClCG06G012580 Citrullus lanatus HOM05D001147 ORTHO05D000823 7.9e-14 82.0 273 27.8
A02p08160 Brassica napus HOM05D001147 ORTHO05D000823 1.4e-13 81.3 224 28.1
Phvul.003G154100 Phaseolus vulgaris HOM05D001147 ORTHO05D000823 1.4e-13 81.3 330 28.8
Sp6g19520 Schrenkiella parvula HOM05D001147 ORTHO05D000823 1.4e-13 81.3 232 31.9
Duzib187G1988 Durio zibethinus HOM05D001147 ORTHO05D000823 1.8e-13 80.9 304 28.3
Psat7g006720 Pisum sativum HOM05D001147 ORTHO05D000823 1.8e-13 80.9 288 30.6
VMungo1309G1356 Vigna mungo HOM05D001147 ORTHO05D000823 2.3e-13 80.5 243 28.8
Gorai.004G273600 Gossypium raimondii HOM05D001147 ORTHO05D000823 3.0e-13 80.1 260 29.6
VMungo1215G2388 Vigna mungo HOM05D001147 ORTHO05D000823 3.0e-13 80.1 334 28.7
unitig_37.g12749 Utricularia gibba HOM05D001147 ORTHO05D000823 3.9e-13 79.7 222 31.1
Phvul.009G196200 Phaseolus vulgaris HOM05D001147 ORTHO05D000823 8.8e-13 78.6 298 27.9
CsaV3_1G029140 Cucumis sativus L. HOM05D000021 ORTHO05D000010 1.1e-12 78.2 265 27.2
THA.LOC104813537 Tarenaya hassleriana HOM05D001147 ORTHO05D000823 1.5e-12 77.8 246 30.5
Lalb_Chr08g0234221 Lupinus albus HOM05D001147 ORTHO05D000823 3.3e-12 76.6 272 28.7
AUR62025358 Chenopodium quinoa HOM05D001147 ORTHO05D000823 5.7e-12 75.9 290 27.9
MD02G1005000 Malus domestica HOM05D001147 ORTHO05D000823 7.4e-12 75.5 371 25.1
Cfa020794 Carpinus fangiana HOM05D001147 ORTHO05D000823 2.2e-11 73.9 276 27.2
AUR62010738 Chenopodium quinoa HOM05D001147 ORTHO05D000823 2.2e-11 73.9 281 26.3
MELO3C010205.2 Cucumis melo HOM05D001147 ORTHO05D000823 8.2e-11 72.0 264 25.8
Peaxi162Scf00062g00015 Petunia axillaris HOM05D001147 ORTHO05D000823 8.2e-11 72.0 121 43.0
TPR.G14467 Trifolium pratense HOM05D001147 ORTHO05D000823 8.2e-11 72.0 297 27.9
Lalb_Chr07g0179961 Lupinus albus HOM05D001147 ORTHO05D000823 1.4e-10 71.2 285 27.7
Sp7g28710 Schrenkiella parvula HOM05D001147 ORTHO05D000823 1.4e-10 71.2 128 34.4
PSO782G1029 Papaver somniferum HOM05D001147 ORTHO05D000823 1.8e-10 70.9 322 24.2
Sc18g0003070 Simmondsia chinensis HOM05D001147 ORTHO05D000823 1.8e-10 70.9 216 27.8
Ca_03163_v3 Cicer arietinum L. HOM05D001147 ORTHO05D000823 2.4e-10 70.5 231 28.6
Ca_21150_v3 Cicer arietinum L. HOM05D001147 ORTHO05D000823 2.4e-10 70.5 295 25.8
Glyma.09G087800 Glycine max HOM05D001147 ORTHO05D000823 2.4e-10 70.5 331 27.2
Lalb_Chr23g0275651 Lupinus albus HOM05D001147 ORTHO05D000823 3.1e-10 70.1 157 30.6
Carub.0007s0973 Capsella rubella HOM05D001147 ORTHO05D000823 4.1e-10 69.7 221 25.3
Prupe.7G266000 Prunus persica HOM05D001147 ORTHO05D000823 4.1e-10 69.7 97 42.3
arahy.Tifrunner.gnm1.ann1.U2WZ8A Arachis hypogaea HOM05D001147 ORTHO05D000823 6.9e-10 68.9 315 27.3
CARHR238680 Cardamine hirsuta HOM05D001147 ORTHO05D000823 6.9e-10 68.9 151 31.8
FvH4_1g00620 Fragaria vesca HOM05D001147 ORTHO05D000823 1.2e-09 68.2 250 27.2
FAN26G2137 Fragaria x ananassa HOM05D001147 ORTHO05D000823 1.2e-09 68.2 250 27.2
FAN28G1301 Fragaria x ananassa HOM05D001147 ORTHO05D000823 1.2e-09 68.2 250 27.2
arahy.Tifrunner.gnm1.ann1.6KF5RS Arachis hypogaea HOM05D001147 ORTHO05D000823 1.5e-09 67.8 313 26.5
MBI14_g08688_MAGBIO Magnolia biondii HOM05D001147 ORTHO05D000823 1.5e-09 67.8 118 32.2
Psat1g025880 Pisum sativum HOM05D001147 ORTHO05D000823 1.5e-09 67.8 203 31.0
Gohir.A08G088200 Gossypium hirsutum HOM05D001147 ORTHO05D000823 2.0e-09 67.4 220 27.3
RcHm_v2.0_Chr2g0085241 Rosa chinensis HOM05D001147 ORTHO05D000823 2.0e-09 67.4 250 26.4
TPR.G24887 Trifolium pratense HOM05D001147 ORTHO05D000823 2.6e-09 67.0 300 26.7
AT4G30830 Arabidopsis thaliana HOM05D001147 ORTHO05D000823 3.4e-09 66.6 232 24.6
A03p12540 Brassica napus HOM05D001147 ORTHO05D000823 3.4e-09 66.6 65 46.2
C03p14740 Brassica napus HOM05D001147 ORTHO05D000823 3.4e-09 66.6 65 46.2
BolC3t13916H Brassica oleracea HOM05D001147 ORTHO05D000823 3.4e-09 66.6 65 46.2
BraA03t10570Z Brassica rapa HOM05D001147 ORTHO05D000823 3.4e-09 66.6 65 46.2
THA.LOC104803906 Tarenaya hassleriana HOM05D001147 ORTHO05D000823 3.4e-09 66.6 139 33.8
FAN23G2262 Fragaria x ananassa HOM05D001147 ORTHO05D000823 4.5e-09 66.2 163 30.7
Gohir.D08G099300 Gossypium hirsutum HOM05D001147 ORTHO05D000823 4.5e-09 66.2 76 42.1
Gorai.004G107100 Gossypium raimondii HOM05D001147 ORTHO05D000823 4.5e-09 66.2 76 42.1
Hund07637 Selenicereus undatus HOM05D001147 ORTHO05D000823 5.9e-09 65.9 226 27.0
TAR531G0003 Trochodendron aralioides HOM05D001147 ORTHO05D000823 7.7e-09 65.5 151 31.1
Thhalv10025538m.g Eutrema salsugineum HOM05D001147 ORTHO05D000823 1.0e-08 65.1 125 31.2
AL7G21290 Arabidopsis lyrata HOM05D001147 ORTHO05D000823 1.3e-08 64.7 235 26.4
Atru.chr7.338 Acer truncatum HOM05D001147 ORTHO05D000823 2.9e-08 63.5 48 54.2
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 5.0e-08 62.8 228 26.8
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 5.0e-08 62.8 228 26.8
BcaNung02737 Brassica carinata HOM05D001147 ORTHO05D000823 6.5e-08 62.4 228 26.3
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 8.5e-08 62.0 232 26.3
Thhalv10000280m.g Eutrema salsugineum HOM05D001147 ORTHO05D000823 1.9e-07 60.8 126 31.0
Aa31LG2G19550 Aethionema arabicum HOM05D001147 ORTHO05D000823 2.5e-07 60.5 125 27.2
Lalb_Chr06g0173231 Lupinus albus HOM05D001147 ORTHO05D000823 2.5e-07 60.5 208 27.4
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 4.2e-07 59.7 228 25.4
BraA03t15076Z Brassica rapa HOM05D001147 ORTHO05D000823 4.2e-07 59.7 228 25.4
SEGI_23857 Sequoiadendron giganteum HOM05D001147 ORTHO05D000823 5.5e-07 59.3 99 34.3
ATR0739G021 Amborella trichopoda HOM05D001147 ORTHO05D000823 9.4e-07 58.5 177 26.0
Glyma.15G194200 Glycine max HOM05D001147 ORTHO05D000823 9.4e-07 58.5 140 31.4
SGA_v2.0_scaffold222G42784 Striga asiatica HOM05D001147 ORTHO05D000823 9.4e-07 58.5 37 75.7
Glyma.04G155400 Glycine max HOM05D001147 ORTHO05D000823 3.6e-06 56.6 54 50.0
arahy.Tifrunner.gnm1.ann1.PH0WUV Arachis hypogaea HOM05D001147 ORTHO05D000823 4.7e-06 56.2 78 38.5
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 4.7e-06 56.2 135 27.4
THA.LOC104803557 Tarenaya hassleriana HOM05D001147 ORTHO05D000823 7.9e-06 55.5 125 32.8


User provided reference genes

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