Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002326g0100 Nicotiana tabacum HOM05D030751 ORTHO05D000580 3.5e-58 228.0 112 100.0
Nitab4.5_0001796g0400 Nicotiana tabacum HOM05D030751 ORTHO05D000580 1.4e-35 152.9 112 74.1
Nitab4.5_0006085g0030 Nicotiana tabacum HOM05D000743 ORTHO05D000580 6.1e-34 147.5 97 80.4
Nitab4.5_0001788g0060 Nicotiana tabacum HOM05D000743 ORTHO05D000580 8.2e-23 110.5 65 83.1
Nitab4.5_0007309g0060 Nicotiana tabacum HOM05D030751 ORTHO05D000580 6.5e-20 100.9 112 55.4
Solyc00g500358.1 Solanum lycopersicum HOM05D000743 ORTHO05D000580 2.4e-14 82.4 50 82.0
PGSC0003DMG401022238 Solanum tuberosum HOM05D000743 ORTHO05D000580 2.4e-14 82.4 50 82.0
RcHm_v2.0_Chr5g0029971 Rosa chinensis HOM05D000743 ORTHO05D000580 5.3e-14 81.3 51 76.5
RcHm_v2.0_MTg0498251 Rosa chinensis HOM05D000743 ORTHO05D000580 5.3e-14 81.3 51 78.4
FvH4_2g28400 Fragaria vesca HOM05D000743 ORTHO05D000580 1.6e-13 79.7 51 76.5
Nitab4.5_0000513g0140 Nicotiana tabacum HOM05D000743 ORTHO05D000580 2.0e-13 79.3 50 78.0
Lj2P1232T89 Lonicera japonica HOM05D000743 ORTHO05D000580 2.7e-13 79.0 50 78.0
TAR477G0001 Trochodendron aralioides HOM05D000743 ORTHO05D000580 2.7e-13 79.0 50 78.0
QL03p055017 Quercus lobata HOM05D000743 ORTHO05D000580 7.7e-13 77.4 50 76.0
GSVIVG01002448001 Vitis vinifera HOM05D000743 ORTHO05D000580 7.7e-13 77.4 50 76.0
HanXRQChr00c0055g0571381 Helianthus annuus HOM05D000743 ORTHO05D000580 1.3e-12 76.6 52 73.1
HanXRQChr03g0087151 Helianthus annuus HOM05D000743 ORTHO05D000580 1.3e-12 76.6 52 73.1
HanXRQMTg0579551 Helianthus annuus HOM05D000743 ORTHO05D000580 1.3e-12 76.6 52 73.1
Lsat_1_v5_gn_1_2921 Lactuca sativa HOM05D000743 ORTHO05D000580 1.7e-12 76.3 52 73.1
Lsat_1_v5_gn_8_76321 Lactuca sativa HOM05D000743 ORTHO05D000580 1.7e-12 76.3 52 73.1
Nn1g10007 Nelumbo nucifera HOM05D000743 ORTHO05D000580 2.2e-12 75.9 50 76.0
ECA039G0013 Erigeron canadensis HOM05D000743 ORTHO05D000580 2.5e-11 72.4 52 71.2
ECA238G4293 Erigeron canadensis HOM05D000743 ORTHO05D000580 4.2e-11 71.6 52 69.2
CANSAT16G0054 Cannabis sativa HOM05D000743 ORTHO05D000580 1.2e-10 70.1 50 74.0
Sc11g0004370 Simmondsia chinensis HOM05D000743 ORTHO05D000580 1.6e-10 69.7 50 72.0
CDE02G1641 Ceratophyllum demersum HOM05D000743 ORTHO05D000580 2.1e-10 69.3 45 77.8
HPP92_007190 Vanilla planifolia HOM05D000743 ORTHO05D000580 3.6e-10 68.6 48 70.8
Aa31csc1168G20 Aethionema arabicum HOM05D000743 ORTHO05D000580 4.7e-10 68.2 48 75.0
AT2G07698 Arabidopsis thaliana HOM05D000743 ORTHO05D000580 4.7e-10 68.2 48 75.0
ATMG01190 Arabidopsis thaliana HOM05D000743 ORTHO05D000580 4.7e-10 68.2 48 75.0
BcaC05g26872 Brassica carinata HOM05D000743 ORTHO05D000580 4.7e-10 68.2 48 75.0
BcaC05g26883 Brassica carinata HOM05D000743 ORTHO05D000580 4.7e-10 68.2 48 75.0
BNapus_Darmor_BZH_scaffold_234p00150 Brassica napus HOM05D000743 ORTHO05D000580 4.7e-10 68.2 48 75.0
BolSC28t60351H Brassica oleracea HOM05D000743 ORTHO05D000580 4.7e-10 68.2 48 75.0
BraSC77t46655Z Brassica rapa HOM05D000743 ORTHO05D000580 4.7e-10 68.2 48 75.0
CARHR283420 Cardamine hirsuta HOM05D000743 ORTHO05D000580 4.7e-10 68.2 48 75.0
CARHR287200 Cardamine hirsuta HOM05D000743 ORTHO05D000580 4.7e-10 68.2 48 75.0
Sp3g25910 Schrenkiella parvula HOM05D000743 ORTHO05D000580 4.7e-10 68.2 48 75.0
Nitab4.5_0001152g0810 Nicotiana tabacum HOM05D000743 ORTHO05D000580 8.0e-10 67.4 108 35.2
BcaC08g43718 Brassica carinata HOM05D000743 ORTHO05D000580 1.0e-09 67.0 48 72.9
Nitab4.5_0007876g0020 Nicotiana tabacum HOM05D000743 ORTHO05D000580 1.4e-09 66.6 50 66.0
Aqoxy4G01617 Aquilegia oxysepala HOM05D000743 ORTHO05D000580 1.8e-09 66.2 51 64.7
C04p19640 Brassica napus HOM05D000743 ORTHO05D000580 4.0e-09 65.1 48 72.9
BolC4t23499H Brassica oleracea HOM05D000743 ORTHO05D000580 4.0e-09 65.1 48 72.9
Nn8g39743 Nelumbo nucifera HOM05D000743 ORTHO05D000580 5.2e-09 64.7 35 88.6
PGR028G0002 Punica granatum HOM05D000743 ORTHO05D000580 8.8e-09 63.9 45 71.1
Zm00001eb434640 Zea mays HOM05D000743 ORTHO05D000580 8.8e-09 63.9 48 66.7
Zm00001eb436190 Zea mays HOM05D000743 ORTHO05D000580 8.8e-09 63.9 48 66.7
Zm00001eb436240 Zea mays HOM05D000743 ORTHO05D000580 8.8e-09 63.9 48 66.7
Zm00001eb436300 Zea mays HOM05D000743 ORTHO05D000580 8.8e-09 63.9 48 66.7
Zm00001eb436340 Zea mays HOM05D000743 ORTHO05D000580 8.8e-09 63.9 48 66.7
Zm00001eb436480 Zea mays HOM05D000743 ORTHO05D000580 8.8e-09 63.9 48 66.7
Zm00001eb437040 Zea mays HOM05D000743 ORTHO05D000580 8.8e-09 63.9 48 66.7
Zm00001eb437490 Zea mays HOM05D000743 ORTHO05D000580 8.8e-09 63.9 48 66.7
Zm00001eb437510 Zea mays HOM05D000743 ORTHO05D000580 8.8e-09 63.9 48 66.7
Zm00001eb441850 Zea mays HOM05D000743 ORTHO05D000580 8.8e-09 63.9 48 66.7
Zm00001eb442490 Zea mays HOM05D000743 ORTHO05D000580 8.8e-09 63.9 48 66.7
Zm00001eb442780 Zea mays HOM05D000743 ORTHO05D000580 8.8e-09 63.9 48 66.7
Zm00001eb442880 Zea mays HOM05D000743 ORTHO05D000580 8.8e-09 63.9 48 66.7
SHI52852 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-08 63.5 45 66.7
SHI36586 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-08 63.2 45 66.7
SHI49908 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-08 63.2 45 66.7
Gohir.D06G053900 Gossypium hirsutum HOM05D000743 ORTHO05D000580 2.6e-08 62.4 50 64.0
Gorai.001G162900 Gossypium raimondii HOM05D000743 ORTHO05D000580 2.6e-08 62.4 50 64.0
Gorai.013G213000 Gossypium raimondii HOM05D000743 ORTHO05D000580 2.6e-08 62.4 50 64.0
Nitab4.5_0002418g0020 Nicotiana tabacum HOM05D000743 ORTHO05D000580 4.4e-08 61.6 41 73.2
Nitab4.5_0003430g0050 Nicotiana tabacum HOM05D030751 ORTHO05D285127 4.4e-08 61.6 45 66.7
SHI34999 Sapria himalayana HOM05D000743 ORTHO05D000580 4.4e-08 61.6 45 62.2
SHI36772 Sapria himalayana HOM05D000743 ORTHO05D000580 4.4e-08 61.6 45 64.4
SHI36783 Sapria himalayana HOM05D000743 ORTHO05D000580 4.4e-08 61.6 45 64.4
SHI36371 Sapria himalayana HOM05D000743 ORTHO05D000580 7.5e-08 60.8 45 64.4
SHI38845 Sapria himalayana HOM05D000743 ORTHO05D000580 7.5e-08 60.8 45 64.4
SHI39989 Sapria himalayana HOM05D000743 ORTHO05D000580 7.5e-08 60.8 45 62.2
SHI40316 Sapria himalayana HOM05D000743 ORTHO05D000580 7.5e-08 60.8 45 64.4
SHI43453 Sapria himalayana HOM05D000743 ORTHO05D000580 7.5e-08 60.8 45 64.4
SHI45577 Sapria himalayana HOM05D000743 ORTHO05D000580 7.5e-08 60.8 45 64.4
SHI46361 Sapria himalayana HOM05D000743 ORTHO05D000580 7.5e-08 60.8 45 64.4
SHI35454 Sapria himalayana HOM05D000743 ORTHO05D000580 9.8e-08 60.5 48 60.4
Nitab4.5_0002316g0050 Nicotiana tabacum HOM05D000743 ORTHO05D000580 1.3e-07 60.1 41 70.7
Hund28637 Selenicereus undatus HOM05D000743 ORTHO05D000580 1.3e-07 60.1 50 64.0
Hund28902 Selenicereus undatus HOM05D000743 ORTHO05D000580 1.3e-07 60.1 50 64.0
Hund29815 Selenicereus undatus HOM05D000743 ORTHO05D000580 1.3e-07 60.1 50 64.0
Hund30932 Selenicereus undatus HOM05D000743 ORTHO05D000580 1.3e-07 60.1 50 64.0
SHI35236 Sapria himalayana HOM05D000743 ORTHO05D000580 1.7e-07 59.7 49 57.1
SHI37853 Sapria himalayana HOM05D000743 ORTHO05D000580 1.7e-07 59.7 45 62.2
SHI39077 Sapria himalayana HOM05D000743 ORTHO05D000580 1.7e-07 59.7 45 62.2
SHI46272 Sapria himalayana HOM05D000743 ORTHO05D000580 1.7e-07 59.7 45 62.2
Lalb_Chr00c29g0408021 Lupinus albus HOM05D000743 ORTHO05D000580 2.2e-07 59.3 49 63.3
Lalb_Chr01g0011011 Lupinus albus HOM05D000743 ORTHO05D000580 2.2e-07 59.3 49 63.3
SHI35976 Sapria himalayana HOM05D000743 ORTHO05D000580 2.2e-07 59.3 45 62.2
SHI36936 Sapria himalayana HOM05D000743 ORTHO05D000580 2.2e-07 59.3 45 62.2
Hund03871 Selenicereus undatus HOM05D000743 ORTHO05D000580 2.2e-07 59.3 48 64.6
SHI36077 Sapria himalayana HOM05D000743 ORTHO05D000580 2.8e-07 58.9 46 60.9
SHI47781 Sapria himalayana HOM05D000743 ORTHO05D000580 2.8e-07 58.9 44 63.6
SHI34624 Sapria himalayana HOM05D000743 ORTHO05D000580 3.7e-07 58.5 45 62.2
SHI44331 Sapria himalayana HOM05D000743 ORTHO05D000580 6.3e-07 57.8 45 62.2
SHI27344 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-06 57.0 45 60.0
SHI34994 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-06 57.0 53 49.1
SHI37066 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-06 57.0 45 62.2
SHI42053 Sapria himalayana HOM05D000743 ORTHO05D000580 1.4e-06 56.6 48 58.3
SHI38480 Sapria himalayana HOM05D000743 ORTHO05D000580 1.8e-06 56.2 50 52.0
SHI40904 Sapria himalayana HOM05D000743 ORTHO05D000580 1.8e-06 56.2 45 60.0
Psat3g040000 Pisum sativum HOM05D000743 ORTHO05D000580 2.4e-06 55.8 49 59.2
SHI36573 Sapria himalayana HOM05D000743 ORTHO05D000580 3.1e-06 55.5 45 60.0
SHI38101 Sapria himalayana HOM05D000743 ORTHO05D000580 3.1e-06 55.5 45 60.0
Solyc00g500345.1 Solanum lycopersicum HOM05D000743 ORTHO05D000580 5.4e-06 54.7 28 96.4
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 7.0e-06 54.3 45 57.8


User provided reference genes

Program Settings