Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002314g0130 Nicotiana tabacum HOM05D013006 ORTHO05D000007 8.3e-48 193.4 96 100.0
Nitab4.5_0005113g0010 Nicotiana tabacum HOM05D013006 ORTHO05D000007 1.7e-21 105.9 73 61.6
Nitab4.5_0000971g0170 Nicotiana tabacum HOM05D013006 ORTHO05D000007 1.2e-19 99.8 61 77.0
Nitab4.5_0003058g0070 Nicotiana tabacum HOM05D013006 ORTHO05D000007 5.2e-18 94.4 78 60.3
Nitab4.5_0002314g0120 Nicotiana tabacum HOM05D028151 ORTHO05D000007 1.5e-17 92.8 64 71.9
Nitab4.5_0000258g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.9e-17 90.1 59 71.2
Nitab4.5_0000041g0250 Nicotiana tabacum HOM05D028151 ORTHO05D000007 1.7e-16 89.4 73 60.3
Nitab4.5_0000606g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-15 86.3 65 55.4
Nitab4.5_0001082g0100 Nicotiana tabacum HOM05D013006 ORTHO05D000007 6.0e-14 80.9 68 58.8
Sopen08g016660 Solanum pennellii HOM05D000004 ORTHO05D000034 5.6e-12 74.3 66 54.5
Nitab4.5_0000676g0040 Nicotiana tabacum HOM05D013006 ORTHO05D000007 9.6e-12 73.6 46 73.9
Nitab4.5_0007825g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-11 72.8 66 48.5
Nitab4.5_0000357g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-11 71.6 66 47.0
Nitab4.5_0007752g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-10 69.3 61 50.8
Nitab4.5_0005100g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-10 68.9 82 40.2
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-10 68.6 92 35.9
Nitab4.5_0009562g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-10 68.2 92 35.9
Nitab4.5_0000355g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-10 67.8 70 40.0
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-10 67.8 66 42.4
Nitab4.5_0000818g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-10 67.4 92 34.8
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-10 67.4 92 34.8
Nitab4.5_0003188g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-10 67.4 73 38.4
Nitab4.5_0003729g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-10 67.0 92 37.0
Nitab4.5_0008416g0020 Nicotiana tabacum HOM05D013006 ORTHO05D000007 8.9e-10 67.0 43 76.7
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.4e-09 65.1 62 46.8
Nitab4.5_0000386g0180 Nicotiana tabacum HOM05D028151 ORTHO05D000007 4.4e-09 64.7 51 54.9
Nitab4.5_0003255g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-09 64.7 89 36.0
Peaxi162Scf00118g00217 Petunia axillaris HOM05D000024 ORTHO05D000007 4.4e-09 64.7 66 45.5
Nitab4.5_0000527g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.8e-09 64.3 72 41.7
Nitab4.5_0014470g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.8e-09 64.3 66 39.4
Nitab4.5_0006025g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.6e-09 63.9 67 35.8
Nitab4.5_0000129g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-08 63.2 55 47.3
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-08 62.8 92 32.6
Nitab4.5_0000032g0500 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-08 62.4 58 44.8
Nitab4.5_0002487g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-08 62.4 78 35.9
PGSC0003DMG400042385 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.2e-08 62.4 66 36.4
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-08 62.0 58 48.3
Sopen04g030310 Solanum pennellii HOM05D000024 ORTHO05D000007 2.9e-08 62.0 65 38.5
PGSC0003DMG400038794 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.9e-08 62.0 67 38.8
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 3.8e-08 61.6 66 40.9
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 4.9e-08 61.2 66 40.9
Nitab4.5_0000099g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.4e-08 60.8 70 35.7
Nitab4.5_0002372g0050 Nicotiana tabacum HOM05D013006 ORTHO05D000007 6.4e-08 60.8 42 71.4
Nitab4.5_0005004g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.4e-08 60.8 66 36.4
Nitab4.5_0009093g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.4e-08 60.8 60 45.0
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 6.4e-08 60.8 62 41.9
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 6.4e-08 60.8 66 39.4
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 6.4e-08 60.8 66 39.4
PGSC0003DMG400043914 Solanum tuberosum HOM05D008663 ORTHO05D017125 6.4e-08 60.8 88 30.7
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.4e-08 60.5 92 34.8
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.4e-08 60.5 92 29.3
Sopen00g003400 Solanum pennellii HOM05D000024 ORTHO05D000007 8.4e-08 60.5 66 39.4
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-07 60.1 66 40.9
Nitab4.5_0002590g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-07 60.1 87 32.2
Nitab4.5_0003058g0080 Nicotiana tabacum HOM05D013006 ORTHO05D000007 1.1e-07 60.1 40 72.5
Nitab4.5_0003058g0090 Nicotiana tabacum HOM05D013006 ORTHO05D000007 1.1e-07 60.1 40 72.5
Nitab4.5_0003347g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-07 60.1 60 45.0
Peaxi162Scf00460g00041 Petunia axillaris HOM05D000024 ORTHO05D000007 1.1e-07 60.1 57 45.6
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 1.1e-07 60.1 66 39.4
Sopen08g013110 Solanum pennellii HOM05D000024 ORTHO05D000007 1.1e-07 60.1 66 39.4
Nitab4.5_0000026g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-07 59.7 92 32.6
Nitab4.5_0000712g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-07 59.7 89 34.8
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-07 59.7 66 39.4
PGSC0003DMG400027601 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.9e-07 59.3 61 42.6
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-07 58.9 58 43.1
Nitab4.5_0003178g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-07 58.9 66 42.4
Nitab4.5_0025326g0010 Nicotiana tabacum HOM05D012219 ORTHO05D000007 2.4e-07 58.9 59 42.4
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 2.4e-07 58.9 66 37.9
Sopen11g013390 Solanum pennellii HOM05D000024 ORTHO05D000007 2.4e-07 58.9 66 37.9
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-07 58.5 92 30.4
Nitab4.5_0002966g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-07 58.5 62 43.5
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 3.2e-07 58.5 66 37.9
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 3.2e-07 58.5 62 38.7
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 3.2e-07 58.5 66 37.9
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 3.2e-07 58.5 62 40.3
PGSC0003DMG400044928 Solanum tuberosum HOM05D000024 ORTHO05D000007 3.2e-07 58.5 60 41.7
Nitab4.5_0000695g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-07 58.2 58 44.8
Nitab4.5_0002045g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-07 58.2 70 37.1
Sopen01g008290 Solanum pennellii HOM05D000047 ORTHO05D000589 5.4e-07 57.8 66 39.4
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.1e-07 57.4 92 32.6
Nitab4.5_0001676g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.3e-07 57.0 57 42.1
Nitab4.5_0005584g0050 Nicotiana tabacum HOM05D000077 ORTHO05D000339 9.3e-07 57.0 92 34.8
PGSC0003DMG400047130 Solanum tuberosum HOM05D000024 ORTHO05D000007 9.3e-07 57.0 62 37.1
Nitab4.5_0000902g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-06 56.6 67 35.8
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-06 56.6 66 37.9
PGSC0003DMG400041037 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.2e-06 56.6 88 31.8
Nitab4.5_0003284g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-06 56.2 63 39.7
Nitab4.5_0003601g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-06 56.2 58 41.4
Nitab4.5_0004401g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-06 56.2 58 48.3
PGSC0003DMG400041338 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.6e-06 56.2 66 39.4
PGSC0003DMG400041868 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.6e-06 56.2 62 40.3
Sopen11g013340 Solanum pennellii HOM05D000024 ORTHO05D000007 2.1e-06 55.8 66 33.3
Nitab4.5_0000372g0090 Nicotiana tabacum HOM05D014359 ORTHO05D000007 2.7e-06 55.5 58 39.7
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-06 55.5 58 43.1
Nitab4.5_0005104g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-06 55.5 76 27.6
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-06 55.5 92 29.3
Nitab4.5_0007908g0010 Nicotiana tabacum HOM05D013006 ORTHO05D000007 2.7e-06 55.5 52 53.8
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 2.7e-06 55.5 66 37.9
Nitab4.5_0000033g0390 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-06 55.1 66 34.8
Nitab4.5_0000847g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-06 55.1 88 34.1
Nitab4.5_0001027g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.6e-06 54.7 64 39.1
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.6e-06 54.7 60 40.0
Nitab4.5_0009076g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.6e-06 54.7 83 33.7
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 4.6e-06 54.7 66 37.9
PGSC0003DMG400034636 Solanum tuberosum HOM05D000024 ORTHO05D000007 4.6e-06 54.7 62 38.7
Nitab4.5_0000175g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-06 54.3 64 35.9
Nitab4.5_0001580g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-06 54.3 63 38.1
Nitab4.5_0004118g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-06 54.3 58 41.4
Nitab4.5_0006194g0020 Nicotiana tabacum HOM05D012219 ORTHO05D000007 6.0e-06 54.3 70 35.7
PGSC0003DMG400013852 Solanum tuberosum HOM05D000024 ORTHO05D000007 6.0e-06 54.3 63 38.1
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-06 53.9 66 39.4
Nitab4.5_0000961g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-06 53.9 63 38.1
Nitab4.5_0002117g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-06 53.9 67 37.3
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-06 53.9 57 38.6


User provided reference genes

Program Settings