Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.4e-84 315.5 161 100.0
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.0e-82 310.1 164 98.2
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 3.2e-76 288.5 163 92.0
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.3e-74 282.3 165 88.5
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.3e-74 282.3 165 88.5
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 6.8e-71 270.8 163 87.7
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 2.6e-70 268.9 163 86.5
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 2.9e-69 265.4 161 83.9
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 4.1e-68 261.5 162 81.5
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 1.0e-66 256.9 161 80.1
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 2.5e-65 252.3 161 79.5
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.4e-63 246.5 162 80.2
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 4.0e-63 245.0 162 79.0
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 4.0e-63 245.0 162 79.0
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 6.9e-63 244.2 165 78.8
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 9.0e-63 243.8 164 78.0
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 1.5e-62 243.0 161 78.3
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 2.6e-62 242.3 164 76.8
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 2.6e-62 242.3 164 76.2
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 2.6e-62 242.3 161 76.4
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 4.4e-62 241.5 161 76.4
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 1.7e-61 239.6 163 76.7
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 2.2e-61 239.2 160 75.6
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 2.9e-61 238.8 161 77.0
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 3.8e-61 238.4 163 74.8
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 3.8e-61 238.4 161 73.3
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 6.4e-61 237.7 163 74.8
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 6.4e-61 237.7 161 75.8
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 6.4e-61 237.7 160 75.0
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 1.1e-60 236.9 162 73.5
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 1.4e-60 236.5 163 73.6
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 1.9e-60 236.1 163 74.8
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 2.4e-60 235.7 161 75.8
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 3.2e-60 235.3 163 74.2
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 3.2e-60 235.3 161 75.2
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 3.2e-60 235.3 161 74.5
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 5.4e-60 234.6 161 74.5
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 9.3e-60 233.8 164 71.3
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 2.7e-59 232.3 161 73.3
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 3.5e-59 231.9 166 74.1
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 1.0e-58 230.3 167 71.3
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 5.1e-58 228.0 166 71.7
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 8.7e-58 227.3 161 71.4
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 1.1e-57 226.9 161 73.3
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 1.1e-57 226.9 164 74.4
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 1.9e-57 226.1 163 73.0
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 1.9e-57 226.1 158 72.2
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 2.5e-57 225.7 164 72.0
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 2.5e-57 225.7 161 70.8
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 3.3e-57 225.3 161 72.0
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 3.3e-57 225.3 161 72.0
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 9.6e-57 223.8 163 71.8
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 9.6e-57 223.8 167 70.7
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 3.6e-56 221.9 141 78.0
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 3.6e-56 221.9 167 69.5
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 4.8e-56 221.5 165 72.7
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 6.2e-56 221.1 161 70.8
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 8.1e-56 220.7 161 70.2
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 1.4e-55 219.9 159 72.3
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 1.4e-55 219.9 165 71.5
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 1.8e-55 219.5 159 71.1
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 2.4e-55 219.2 159 73.0
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 2.4e-55 219.2 159 73.0
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 2.4e-55 219.2 163 73.6
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 3.1e-55 218.8 159 69.2
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 3.1e-55 218.8 159 74.2
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 4.0e-55 218.4 157 71.3
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 4.0e-55 218.4 158 73.4
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 6.9e-55 217.6 157 73.2
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 6.9e-55 217.6 157 73.2
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 1.2e-54 216.9 161 69.6
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 1.2e-54 216.9 158 67.7
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 1.5e-54 216.5 162 70.4
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 2.0e-54 216.1 158 73.4
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 3.4e-54 215.3 146 71.9
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 4.5e-54 214.9 162 66.0
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 5.8e-54 214.5 160 66.9
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 2.2e-53 212.6 157 70.1
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 2.2e-53 212.6 146 73.3
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 2.2e-53 212.6 161 67.7
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 2.9e-53 212.2 159 68.6
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 3.8e-53 211.8 163 69.3
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 3.8e-53 211.8 160 67.5
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 4.9e-53 211.5 162 68.5
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 6.4e-53 211.1 122 78.7
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 8.4e-53 210.7 158 66.5
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 1.1e-52 210.3 167 64.7
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.4e-52 209.9 162 67.9
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.4e-52 209.9 162 67.9
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 1.4e-52 209.9 158 65.8
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 5.4e-52 208.0 163 69.3
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 5.4e-52 208.0 163 69.3
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 2.1e-51 206.1 159 69.2
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 4.6e-51 204.9 163 68.1
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 6.0e-51 204.5 166 68.7
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 7.9e-51 204.1 163 65.6
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 7.9e-51 204.1 145 73.8
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 1.0e-50 203.8 167 62.9
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.3e-50 203.4 159 68.6
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 1.8e-50 203.0 159 63.5
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 1.8e-50 203.0 162 64.2
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 3.9e-50 201.8 158 63.9
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 3.9e-50 201.8 158 65.2
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 3.9e-50 201.8 159 67.9
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 8.1e-48 194.1 131 67.9
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 1.4e-47 193.4 119 75.6
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 3.1e-47 192.2 120 79.2
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 4.6e-43 178.3 151 63.6
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 1.5e-41 173.3 151 62.3
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 4.5e-38 161.8 97 77.3
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 1.2e-35 153.7 130 54.6
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 7.4e-33 144.4 158 46.2
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 2.0e-30 136.3 77 77.9
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 5.0e-29 131.7 84 76.2
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 3.6e-27 125.6 106 67.0
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 5.1e-26 121.7 130 50.8
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 4.3e-25 118.6 90 67.8
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 2.2e-24 116.3 90 66.7
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 1.5e-22 110.2 171 50.9
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 3.3e-17 92.4 92 54.3
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 7.7e-14 81.3 48 77.1
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 1.7e-13 80.1 48 79.2
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 1.7e-13 80.1 118 38.1
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 5.0e-13 78.6 125 35.2
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.8e-10 70.1 131 33.6


User provided reference genes

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