Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.3e-77 292.4 167 100.0
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 9.0e-66 253.8 165 89.7
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 1.1e-47 193.7 174 73.6
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.0e-45 185.7 166 70.5
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 8.7e-45 184.1 166 70.5
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 6.3e-43 177.9 163 60.7
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.2e-41 173.7 162 59.9
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.2e-41 173.7 162 68.5
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 2.6e-41 172.6 165 69.1
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 4.5e-41 171.8 166 62.0
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 5.9e-41 171.4 165 67.3
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 1.0e-40 170.6 166 59.6
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 1.0e-40 170.6 166 61.4
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 1.3e-40 170.2 163 61.3
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 1.7e-40 169.9 165 67.3
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 1.7e-40 169.9 166 61.4
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 2.9e-40 169.1 164 58.5
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 5.0e-40 168.3 165 59.4
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 8.5e-40 167.5 166 59.0
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 2.5e-39 166.0 165 63.0
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 2.5e-39 166.0 166 63.9
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.2e-39 165.6 165 58.8
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 4.2e-39 165.2 165 58.2
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 4.2e-39 165.2 165 58.8
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 4.2e-39 165.2 166 56.0
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 7.2e-39 164.5 174 57.5
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 9.3e-39 164.1 163 59.5
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 9.3e-39 164.1 166 55.4
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 9.3e-39 164.1 161 61.5
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 1.6e-38 163.3 166 56.0
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 2.1e-38 162.9 165 58.8
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 3.6e-38 162.2 146 71.9
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 3.6e-38 162.2 165 58.2
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 3.6e-38 162.2 161 56.5
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 3.6e-38 162.2 165 54.5
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 6.1e-38 161.4 161 59.0
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 6.1e-38 161.4 166 65.1
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 7.9e-38 161.0 156 57.1
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 7.9e-38 161.0 165 63.0
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 1.4e-37 160.2 165 53.3
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.4e-37 160.2 165 61.8
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 2.3e-37 159.5 164 65.2
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 6.7e-37 157.9 167 56.3
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 6.7e-37 157.9 165 57.6
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.5e-36 156.8 163 54.0
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 1.9e-36 156.4 165 60.6
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 1.9e-36 156.4 166 64.5
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.9e-36 156.4 165 61.2
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 3.3e-36 155.6 163 60.1
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 3.3e-36 155.6 161 54.7
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 7.4e-36 154.5 166 59.6
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.7e-35 153.3 161 53.4
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.7e-35 153.3 160 54.4
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 4.8e-35 151.8 163 63.8
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 6.3e-35 151.4 162 54.3
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 8.2e-35 151.0 163 56.4
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 8.2e-35 151.0 164 57.3
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 8.2e-35 151.0 165 55.8
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 1.1e-34 150.6 165 62.4
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 1.1e-34 150.6 165 52.1
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 2.4e-34 149.4 142 57.7
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 2.4e-34 149.4 162 54.3
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 4.1e-34 148.7 165 55.2
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 1.2e-33 147.1 165 53.3
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 1.2e-33 147.1 163 50.9
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.5e-33 146.7 165 52.1
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 4.5e-33 145.2 191 56.0
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 8.5e-32 141.0 164 50.6
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 1.1e-31 140.6 157 52.2
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 1.4e-31 140.2 174 50.0
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 1.2e-30 137.1 121 65.3
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 2.1e-30 136.3 162 50.0
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 2.1e-30 136.3 165 50.3
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 1.0e-29 134.0 157 51.6
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 1.4e-29 133.7 165 47.3
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.8e-29 133.3 147 50.3
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 1.8e-29 133.3 169 48.5
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 3.0e-29 132.5 150 52.7
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 6.7e-29 131.3 166 49.4
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 6.7e-29 131.3 166 48.8
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 6.7e-29 131.3 189 45.0
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 1.1e-28 130.6 172 50.0
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 1.5e-28 130.2 152 54.6
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 4.4e-28 128.6 166 48.8
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 5.7e-28 128.3 163 50.3
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 3.7e-27 125.6 160 47.5
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 3.1e-26 122.5 168 47.0
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 4.1e-26 122.1 148 45.9
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 5.3e-26 121.7 158 50.0
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.6e-25 119.4 145 49.7
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 2.6e-25 119.4 145 49.7
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 3.4e-25 119.0 147 49.0
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 7.7e-25 117.9 145 49.0
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.3e-24 117.1 147 46.3
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.3e-24 117.1 168 47.0
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.7e-24 116.7 167 47.9
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 5.5e-23 111.7 165 43.0
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 5.5e-23 111.7 165 43.0
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 2.1e-22 109.8 167 42.5
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 2.1e-22 109.8 138 47.1
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 2.1e-22 109.8 162 43.8
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 2.7e-22 109.4 167 44.9
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 6.1e-22 108.2 157 43.9
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.0e-21 107.5 162 39.5
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 1.8e-21 106.7 137 47.4
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 1.1e-20 104.0 157 42.7
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 1.1e-20 104.0 160 42.5
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 1.5e-20 103.6 145 45.5
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 1.5e-20 103.6 172 45.9
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 2.0e-20 103.2 163 44.2
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 2.0e-20 103.2 167 43.1
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 2.0e-20 103.2 163 44.2
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 2.6e-20 102.8 145 44.8
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 3.3e-20 102.4 136 45.6
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 4.4e-20 102.1 162 43.8
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 4.4e-20 102.1 145 44.8
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 1.3e-19 100.5 161 44.1
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 1.3e-19 100.5 168 37.5
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 1.7e-19 100.1 136 45.6
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 1.7e-19 100.1 155 45.2
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 2.2e-19 99.8 162 42.6
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 2.8e-19 99.4 145 43.4
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 3.7e-19 99.0 119 53.8
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 3.7e-19 99.0 138 45.7
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 8.2e-19 97.8 96 57.3
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 8.2e-19 97.8 96 57.3
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 1.1e-18 97.4 145 44.1
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 1.1e-18 97.4 147 42.9
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 1.1e-18 97.4 145 44.1
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 3.1e-18 95.9 167 41.3
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 3.1e-18 95.9 167 41.3
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 4.1e-18 95.5 162 39.5
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 5.9e-17 91.7 132 38.6
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 7.7e-17 91.3 125 44.8
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 5.0e-16 88.6 139 41.0
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 4.2e-15 85.5 173 38.7
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 9.4e-15 84.3 127 43.3
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 9.4e-15 84.3 161 42.9
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.2e-14 84.0 161 41.6
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 1.6e-14 83.6 159 42.8
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 2.7e-14 82.8 161 41.0
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 4.7e-14 82.0 161 42.2
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 4.7e-14 82.0 161 42.2
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 1.0e-13 80.9 172 36.6
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 1.4e-13 80.5 144 41.0
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 3.0e-13 79.3 169 35.5
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 2.0e-12 76.6 61 68.9
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 2.6e-12 76.3 135 39.3
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.7e-11 73.6 105 42.9
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 2.2e-11 73.2 166 36.1
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 1.8e-10 70.1 96 45.8
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 5.3e-10 68.6 86 64.0
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 7.0e-10 68.2 75 54.7
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 9.1e-10 67.8 153 35.3
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 7.7e-09 64.7 106 38.7
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 1.0e-08 64.3 64 56.2
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 1.5e-07 60.5 146 28.8
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.5e-07 60.5 76 47.4
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 3.6e-06 55.8 87 43.7


User provided reference genes

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