Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002310g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 3.4e-158 561.6 282 100.0
Sopen12g034430 Solanum pennellii HOM05D006179 ORTHO05D008370 6.1e-123 444.5 312 75.0
Solyc12g099800.2 Solanum lycopersicum HOM05D006179 ORTHO05D008370 2.3e-122 442.6 312 74.7
CAN.G1305.17 Capsicum annuum HOM05D006179 ORTHO05D008370 1.4e-106 390.2 310 69.0
PGSC0003DMG401004716 Solanum tuberosum HOM05D006179 ORTHO05D008370 2.4e-103 379.4 237 80.6
Nitab4.5_0001290g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 6.5e-101 371.3 225 85.3
Peaxi162Scf00272g00828 Petunia axillaris HOM05D006179 ORTHO05D008370 9.4e-92 340.9 309 62.1
PGR119G2402 Punica granatum HOM05D006179 ORTHO05D008370 2.0e-89 333.2 311 60.8
Oeu061700.1 Olea europaea HOM05D006179 ORTHO05D008370 3.7e-88 328.9 313 60.1
Atru.chr3.2957 Acer truncatum HOM05D006179 ORTHO05D008370 8.3e-88 327.8 297 60.9
SGA_v2.0_scaffold8G04541 Striga asiatica HOM05D006179 ORTHO05D008370 1.4e-87 327.0 234 71.8
Gohir.A07G121100 Gossypium hirsutum HOM05D006179 ORTHO05D008370 9.1e-87 324.3 245 69.0
Migut.D00669 Erythranthe guttata HOM05D006179 ORTHO05D008370 1.2e-86 323.9 234 71.4
Gohir.D07G125300 Gossypium hirsutum HOM05D006179 ORTHO05D008370 3.5e-86 322.4 245 68.6
Potri.009G069300 Populus trichocarpa HOM05D006179 ORTHO05D008370 4.5e-86 322.0 317 60.9
GSVIVG01037292001 Vitis vinifera HOM05D006179 ORTHO05D008370 1.3e-85 320.5 312 58.3
Hma1.2p1_0470F.1_g159226 Hydrangea macrophylla HOM05D006179 ORTHO05D008370 2.2e-85 319.7 324 56.2
CANSAT54G1770 Cannabis sativa HOM05D006179 ORTHO05D008370 3.8e-85 318.9 309 57.9
CiPaw.14G111900 Carya illinoinensis HOM05D006179 ORTHO05D008370 3.8e-85 318.9 310 59.4
COL.COLO4_24491 Corchorus olitorius HOM05D006179 ORTHO05D008370 1.1e-84 317.4 319 56.4
CSS0020940 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 5.5e-84 315.1 309 57.0
arahy.Tifrunner.gnm1.ann1.66DN5N Arachis hypogaea HOM05D006179 ORTHO05D008370 9.4e-84 314.3 226 70.4
VMungo0647G1137 Vigna mungo HOM05D006179 ORTHO05D008370 9.4e-84 314.3 226 70.4
Cc00_g17410 Coffea canephora HOM05D006179 ORTHO05D008370 1.2e-83 313.9 230 69.6
arahy.Tifrunner.gnm1.ann1.0RM1GA Arachis hypogaea HOM05D006179 ORTHO05D008370 2.1e-83 313.2 232 69.0
Glyma.14G035700 Glycine max HOM05D006179 ORTHO05D008370 2.7e-83 312.8 226 69.5
TPR.G16411 Trifolium pratense HOM05D006179 ORTHO05D008370 3.6e-83 312.4 226 70.4
Cfa009884 Carpinus fangiana HOM05D006179 ORTHO05D008370 4.7e-83 312.0 312 57.7
Glyma.02G279000 Glycine max HOM05D006179 ORTHO05D008370 4.7e-83 312.0 283 59.4
PSO384G2846 Papaver somniferum HOM05D006179 ORTHO05D008370 8.0e-83 311.2 284 59.9
Rhsim01G0195300 Rhododendron simsii HOM05D006179 ORTHO05D008370 8.0e-83 311.2 300 56.7
LjContig00564g0004002 Lotus japonicus HOM05D006179 ORTHO05D008370 1.0e-82 310.8 226 69.0
SalBow6G4024 Salvia bowleyana HOM05D006179 ORTHO05D008370 1.0e-82 310.8 312 57.4
vmacro14276 Vaccinium macrocarpon HOM05D006179 ORTHO05D008370 1.0e-82 310.8 289 57.4
QL01p016926 Quercus lobata HOM05D006179 ORTHO05D008370 1.8e-82 310.1 224 70.1
EL10Ac4g10106 Beta vulgaris HOM05D006179 ORTHO05D008370 3.0e-82 309.3 255 64.7
RcHm_v2.0_Chr5g0050451 Rosa chinensis HOM05D006179 ORTHO05D008370 3.0e-82 309.3 309 57.9
Lalb_Chr04g0249261 Lupinus albus HOM05D006179 ORTHO05D008370 4.0e-82 308.9 309 57.3
Prupe.4G263800 Prunus persica HOM05D006179 ORTHO05D008370 6.8e-82 308.1 310 56.1
Ca_06199_v3 Cicer arietinum L. HOM05D006179 ORTHO05D008370 8.8e-82 307.8 227 68.3
Psat2g020720 Pisum sativum HOM05D006179 ORTHO05D008370 8.8e-82 307.8 226 69.5
PSO339G0647 Papaver somniferum HOM05D006179 ORTHO05D008370 1.2e-81 307.4 287 58.5
HanXRQChr13g0390131 Helianthus annuus HOM05D006179 ORTHO05D008370 2.0e-81 306.6 313 57.2
Phvul.008G201800 Phaseolus vulgaris HOM05D006179 ORTHO05D008370 2.6e-81 306.2 225 69.3
Gorai.001G135100 Gossypium raimondii HOM05D006179 ORTHO05D008370 7.5e-81 304.7 236 67.8
TWI31G1173 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 1.7e-80 303.5 299 57.5
TWI79G0794 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 1.7e-80 303.5 215 71.6
Medtr5g089330 Medicago truncatula HOM05D006179 ORTHO05D008370 2.8e-80 302.8 279 59.1
Sc16g0011000 Simmondsia chinensis HOM05D006179 ORTHO05D008370 2.8e-80 302.8 221 69.7
Hund21973 Selenicereus undatus HOM05D006179 ORTHO05D008370 3.7e-80 302.4 226 67.3
Lj2C622G16 Lonicera japonica HOM05D006179 ORTHO05D008370 1.4e-79 300.4 312 55.4
Sed0005347 Sechium edule HOM05D006179 ORTHO05D008370 1.4e-79 300.4 270 61.1
Thecc.09G246900 Theobroma cacao HOM05D006179 ORTHO05D008370 1.4e-79 300.4 365 49.9
unitig_62.g23875 Utricularia gibba HOM05D006179 ORTHO05D008370 1.4e-79 300.4 221 68.8
ClCG02G022800 Citrullus lanatus HOM05D006179 ORTHO05D008370 3.1e-79 299.3 244 64.8
FvH4_3g27810 Fragaria vesca HOM05D006179 ORTHO05D008370 4.1e-79 298.9 214 71.0
MD11G1184200 Malus domestica HOM05D006179 ORTHO05D008370 4.1e-79 298.9 226 67.7
Aqoxy1G00395 Aquilegia oxysepala HOM05D006179 ORTHO05D008370 7.0e-79 298.1 288 56.9
AUR62000204 Chenopodium quinoa HOM05D006179 ORTHO05D008370 7.0e-79 298.1 216 69.0
Nn2g14782 Nelumbo nucifera HOM05D006179 ORTHO05D008370 2.0e-78 296.6 303 55.1
FAN25G1664 Fragaria x ananassa HOM05D006179 ORTHO05D008370 2.7e-78 296.2 214 71.0
TAR623G0610 Trochodendron aralioides HOM05D006179 ORTHO05D008370 7.7e-78 294.7 312 54.8
Ah.04g159740 Amaranthus hybridus HOM05D006179 ORTHO05D008370 3.8e-77 292.4 216 67.6
Duzib170G0239 Durio zibethinus HOM05D006179 ORTHO05D008370 5.0e-77 292.0 267 61.8
Sabra09G0052200 Salix brachista HOM05D006179 ORTHO05D008370 8.6e-77 291.2 348 51.7
AUR62006552 Chenopodium quinoa HOM05D006179 ORTHO05D008370 2.5e-76 289.7 227 64.8
TPR.G16393 Trifolium pratense HOM05D006179 ORTHO05D008370 2.5e-76 289.7 225 65.3
Atru.chr3.2952 Acer truncatum HOM05D006179 ORTHO05D008370 9.5e-76 287.7 270 60.7
Cpa.g.sc157.57 Carica papaya HOM05D006179 ORTHO05D008370 1.6e-75 287.0 258 58.1
Haze_23248 Corylus avellana HOM05D006179 ORTHO05D008370 2.3e-74 283.1 262 56.9
ATR0621G006 Amborella trichopoda HOM05D006179 ORTHO05D008370 8.9e-74 281.2 216 64.8
Nn7g36750 Nelumbo nucifera HOM05D006179 ORTHO05D008370 1.2e-73 280.8 211 66.4
Zm00001eb331180 Zea mays HOM05D006179 ORTHO05D008370 1.2e-73 280.8 210 66.2
Os07g0687500 Oryza sativa ssp. japonica HOM05D006179 ORTHO05D008370 1.5e-73 280.4 288 54.5
CDE02G1620 Ceratophyllum demersum HOM05D006179 ORTHO05D008370 2.0e-73 280.0 294 52.0
DCAR_024400 Daucus carota HOM05D006179 ORTHO05D008370 2.0e-73 280.0 198 71.2
Lsat_1_v5_gn_5_65341 Lactuca sativa HOM05D006179 ORTHO05D008370 3.5e-70 269.2 306 53.9
FAN21G1036 Fragaria x ananassa HOM05D006179 ORTHO05D008370 5.9e-70 268.5 222 64.9
Aa31LG1G8830 Aethionema arabicum HOM05D006179 ORTHO05D008370 8.6e-69 264.6 310 51.0
CARHR193590 Cardamine hirsuta HOM05D006179 ORTHO05D008370 2.1e-67 260.0 313 49.2
THA.LOC104811194 Tarenaya hassleriana HOM05D006179 ORTHO05D008370 6.2e-67 258.5 315 48.6
FAN11G2659 Fragaria x ananassa HOM05D000059 ORTHO05D008370 1.0e-66 257.7 187 71.1
Thhalv10014227m.g Eutrema salsugineum HOM05D006179 ORTHO05D008370 2.3e-66 256.5 219 60.3
HPP92_028459 Vanilla planifolia HOM05D006179 ORTHO05D008370 5.2e-66 255.4 183 66.7
BolC3t13573H Brassica oleracea HOM05D006179 ORTHO05D008370 6.8e-66 255.0 310 48.7
Sp6g25040 Schrenkiella parvula HOM05D006179 ORTHO05D008370 6.8e-66 255.0 313 49.8
BcaB01g04864 Brassica carinata HOM05D006179 ORTHO05D008370 1.2e-65 254.2 285 52.3
A03p09460 Brassica napus HOM05D006179 ORTHO05D008370 2.0e-65 253.4 230 57.4
BraA03t10264Z Brassica rapa HOM05D006179 ORTHO05D008370 2.0e-65 253.4 230 57.4
C03p11040 Brassica napus HOM05D006179 ORTHO05D008370 3.4e-65 252.7 314 49.4
A02p05510 Brassica napus HOM05D006179 ORTHO05D008370 2.9e-64 249.6 225 57.3
BcaC03g13669 Brassica carinata HOM05D006179 ORTHO05D008370 3.7e-64 249.2 226 57.5
AL6G30860 Arabidopsis lyrata HOM05D006179 ORTHO05D008370 7.0e-63 245.0 314 48.4
MELO3C014557.2 Cucumis melo HOM05D006179 ORTHO05D008370 1.2e-62 244.2 177 73.4
Dinv36157 Davidia involucrata HOM05D006179 ORTHO05D008370 2.7e-62 243.0 233 61.4
BraA02t05502Z Brassica rapa HOM05D006179 ORTHO05D008370 3.5e-62 242.7 249 52.2
Mapoly0003s0043 Marchantia polymorpha HOM05D006179 ORTHO05D008370 4.6e-62 242.3 246 52.4
AT5G19370 Arabidopsis thaliana HOM05D006179 ORTHO05D008370 8.6e-61 238.0 314 47.1
Carub.0006s1771 Capsella rubella HOM05D006179 ORTHO05D008370 1.1e-60 237.7 319 44.5
CsaV3_6G038930 Cucumis sativus L. HOM05D006179 ORTHO05D008370 3.3e-60 236.1 194 67.0
SMO145G0007 Selaginella moellendorffii HOM05D006179 ORTHO05D008370 9.5e-60 234.6 229 53.3
BNapus_Darmor_BZH_scaffold_38p02550 Brassica napus HOM05D006179 ORTHO05D008370 1.4e-58 230.7 217 55.8
Pp3c3_13280 Physcomitrium patens HOM05D006179 ORTHO05D008370 5.2e-58 228.8 297 45.8
Manes.02G138400 Manihot esculenta HOM05D006179 ORTHO05D008370 2.9e-56 223.0 167 71.3
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 2.1e-54 216.9 175 67.4
Eucgr.J00687 Eucalyptus grandis HOM05D006179 ORTHO05D008370 1.3e-53 214.2 151 69.5
BcaB01g05143 Brassica carinata HOM05D006179 ORTHO05D008370 1.7e-53 213.8 179 59.8
AUR62040469 Chenopodium quinoa HOM05D006179 ORTHO05D008370 1.5e-52 210.7 181 61.3
CBR_g54969 Chara braunii HOM05D006179 ORTHO05D008370 1.9e-52 210.3 244 50.8
AagrBONN_evm.TU.Sc2ySwM_117.3174 Anthoceros agrestis HOM05D006179 ORTHO05D008370 2.5e-52 209.9 227 48.0
Ciclev10017644m.g Citrus clementina HOM05D006179 ORTHO05D008370 2.0e-49 200.3 151 65.6
Peaxi162Scf00174g00223 Petunia axillaris HOM05D006179 ORTHO05D008370 4.9e-48 195.7 194 58.2
AUR62037598 Chenopodium quinoa HOM05D006179 ORTHO05D007344 1.2e-46 191.0 138 70.3
ECA233G4787 Erigeron canadensis HOM05D006179 ORTHO05D008370 3.9e-45 186.0 143 67.1
SEGI_16296 Sequoiadendron giganteum HOM05D006179 ORTHO05D008370 5.2e-42 175.6 128 64.8
AUR62042212 Chenopodium quinoa HOM05D006179 ORTHO05D008370 7.8e-38 161.8 116 69.0
SalBow6G2129 Salvia bowleyana HOM05D006179 ORTHO05D353266 3.8e-32 142.9 169 52.7
Cre07.g350400 Chlamydomonas reinhardtii HOM05D006179 ORTHO05D008370 3.2e-23 113.2 182 31.3
CSS0040024 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 1.2e-22 111.3 70 77.1
MCO13G336 Micromonas commoda HOM05D006179 ORTHO05D008370 4.8e-19 99.4 202 33.7
MCO16G521 Micromonas commoda HOM05D005637 ORTHO05D006983 6.9e-10 68.9 102 42.2
CSS0040434 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 9.3e-07 58.5 37 73.0
Haze_26617 Corylus avellana HOM05D006179 ORTHO05D164269 9.3e-07 58.5 152 32.2


User provided reference genes

Program Settings