Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002307g0080 Nicotiana tabacum HOM05D007411 ORTHO05D009025 7.4e-114 414.1 238 100.0
Nitab4.5_0004062g0070 Nicotiana tabacum HOM05D007411 ORTHO05D009025 2.0e-90 336.3 231 83.1
Solyc09g082310.2 Solanum lycopersicum HOM05D007411 ORTHO05D009025 3.1e-51 206.1 232 57.3
Sopen09g031190 Solanum pennellii HOM05D007411 ORTHO05D009025 1.2e-50 204.1 234 56.4
CAN.G1094.25 Capsicum annuum HOM05D007411 ORTHO05D009025 1.3e-49 200.7 155 66.5
Peaxi162Scf00092g00336 Petunia axillaris HOM05D007411 ORTHO05D009025 1.7e-41 173.7 118 70.3
Dinv14014 Davidia involucrata HOM05D007411 ORTHO05D009025 4.6e-31 139.0 104 58.7
Migut.G00360 Erythranthe guttata HOM05D007411 ORTHO05D009025 4.6e-31 139.0 104 58.7
SGA_v2.0_scaffold151G36714 Striga asiatica HOM05D007411 ORTHO05D009025 1.9e-29 133.7 127 51.2
Prupe.1G017200 Prunus persica HOM05D007411 ORTHO05D009025 3.3e-29 132.9 200 41.5
Hma1.2p1_1572F.1_g291440 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 7.3e-29 131.7 198 41.4
Hma1.2p1_2201F.1_g317040 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 7.3e-29 131.7 198 41.4
QL06p001698 Quercus lobata HOM05D007411 ORTHO05D009025 7.3e-29 131.7 106 56.6
SalBow2G3064 Salvia bowleyana HOM05D007411 ORTHO05D009025 1.6e-28 130.6 109 52.3
Actinidia23528 Actinidia chinensis HOM05D007411 ORTHO05D009025 9.0e-27 124.8 118 50.0
MD16G1196900 Malus domestica HOM05D007411 ORTHO05D009025 3.4e-26 122.9 93 58.1
Lsat_1_v5_gn_9_80381 Lactuca sativa HOM05D007411 ORTHO05D009025 1.7e-25 120.6 121 47.9
Peaxi162Scf00092g00337 Petunia axillaris HOM05D007411 ORTHO05D009025 2.9e-25 119.8 133 60.2
CiPaw.01G198400 Carya illinoinensis HOM05D007411 ORTHO05D009025 3.8e-25 119.4 180 42.2
MD13G1196400 Malus domestica HOM05D007411 ORTHO05D009025 3.8e-25 119.4 94 55.3
FvH4_4g15980 Fragaria vesca HOM05D007411 ORTHO05D009025 6.4e-25 118.6 101 51.5
MELO3C012663.2 Cucumis melo HOM05D007411 ORTHO05D009025 3.2e-24 116.3 105 51.4
ECA236G4939 Erigeron canadensis HOM05D007411 ORTHO05D009025 4.2e-24 115.9 125 44.8
Cfa008473 Carpinus fangiana HOM05D007411 ORTHO05D009025 1.2e-23 114.4 118 50.0
FAN07G0509 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.2e-23 114.4 198 39.4
CsaV3_7G022390 Cucumis sativus L. HOM05D007411 ORTHO05D009025 2.1e-23 113.6 106 49.1
FAN22G0418 Fragaria x ananassa HOM05D007411 ORTHO05D009025 2.1e-23 113.6 120 46.7
FAN12G4330 Fragaria x ananassa HOM05D007411 ORTHO05D009025 4.6e-23 112.5 154 39.0
Potri.010G085000 Populus trichocarpa HOM05D007411 ORTHO05D009025 4.6e-23 112.5 121 46.3
CSS0014995 Camellia sinensis var. sinensis HOM05D007411 ORTHO05D009025 6.0e-23 112.1 97 54.6
Ciclev10006648m.g Citrus clementina HOM05D007411 ORTHO05D009025 7.8e-23 111.7 105 53.3
FAN17G1166 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.3e-22 110.9 198 38.4
HanXRQChr05g0131941 Helianthus annuus HOM05D007411 ORTHO05D009025 6.6e-22 108.6 156 43.6
Gohir.A09G217300 Gossypium hirsutum HOM05D007411 ORTHO05D009025 8.7e-22 108.2 195 37.4
RcHm_v2.0_Chr4g0415591 Rosa chinensis HOM05D007411 ORTHO05D009025 1.5e-21 107.5 94 51.1
Ca_24421_v3 Cicer arietinum L. HOM05D007411 ORTHO05D009025 1.9e-21 107.1 98 50.0
Gohir.D09G219700 Gossypium hirsutum HOM05D007411 ORTHO05D009025 1.9e-21 107.1 195 36.9
TWI09G1055 Tripterygium wilfordii HOM05D007411 ORTHO05D009025 1.9e-21 107.1 130 40.0
arahy.Tifrunner.gnm1.ann1.SC2WWN Arachis hypogaea HOM05D007411 ORTHO05D009025 2.5e-21 106.7 132 43.9
arahy.Tifrunner.gnm1.ann1.UE7NK8 Arachis hypogaea HOM05D007411 ORTHO05D009025 2.5e-21 106.7 132 43.9
THA.LOC104808560 Tarenaya hassleriana HOM05D007411 ORTHO05D009025 3.3e-21 106.3 106 46.2
Gorai.006G240700 Gossypium raimondii HOM05D007411 ORTHO05D009025 5.6e-21 105.5 195 36.4
Sed0024167 Sechium edule HOM05D007411 ORTHO05D009025 5.6e-21 105.5 103 49.5
RcHm_v2.0_Chr4g0391821 Rosa chinensis HOM05D007411 ORTHO05D009025 1.6e-20 104.0 94 51.1
ClCG06G006330 Citrullus lanatus HOM05D007411 ORTHO05D009025 2.1e-20 103.6 200 35.0
Aqoxy5G00439 Aquilegia oxysepala HOM05D007411 ORTHO05D009025 1.1e-19 101.3 122 44.3
Nn6g34119 Nelumbo nucifera HOM05D007411 ORTHO05D009025 1.1e-19 101.3 106 48.1
Sp7g12940 Schrenkiella parvula HOM05D007411 ORTHO05D009025 1.4e-19 100.9 103 46.6
AT4G14805 Arabidopsis thaliana HOM05D007411 ORTHO05D009025 1.8e-19 100.5 126 42.1
BraA05t20579Z Brassica rapa HOM05D007411 ORTHO05D009025 1.8e-19 100.5 103 45.6
CANSAT78G1457 Cannabis sativa HOM05D007411 ORTHO05D009025 1.8e-19 100.5 182 36.8
DCAR_027228 Daucus carota HOM05D002080 ORTHO05D002062 2.4e-19 100.1 93 47.3
BcaC07g37855 Brassica carinata HOM05D007411 ORTHO05D009025 3.1e-19 99.8 106 45.3
A05p16750 Brassica napus HOM05D007411 ORTHO05D009025 3.1e-19 99.8 103 45.6
BolC8t48245H Brassica oleracea HOM05D007411 ORTHO05D009025 3.1e-19 99.8 106 45.3
VMungo1215G0970 Vigna mungo HOM05D007411 ORTHO05D009025 5.3e-19 99.0 113 44.2
BcaB04g18262 Brassica carinata HOM05D007411 ORTHO05D009025 6.9e-19 98.6 103 44.7
A08p11480 Brassica napus HOM05D007411 ORTHO05D009025 6.9e-19 98.6 103 45.6
TAR633G2267 Trochodendron aralioides HOM05D007411 ORTHO05D009025 6.9e-19 98.6 120 44.2
BraA08t33142Z Brassica rapa HOM05D007411 ORTHO05D009025 9.0e-19 98.2 103 45.6
CARHR221360 Cardamine hirsuta HOM05D007411 ORTHO05D009025 9.0e-19 98.2 130 43.1
BcaC02g11603 Brassica carinata HOM05D007411 ORTHO05D009025 1.2e-18 97.8 103 44.7
C04p13410 Brassica napus HOM05D007411 ORTHO05D009025 1.2e-18 97.8 103 44.7
Duzib151G0508 Durio zibethinus HOM05D007411 ORTHO05D009025 1.2e-18 97.8 91 49.5
LjContig00222g0000468 Lotus japonicus HOM05D007411 ORTHO05D009025 1.2e-18 97.8 101 44.6
C06p16920 Brassica napus HOM05D007411 ORTHO05D009025 1.5e-18 97.4 103 44.7
BolC6t36888H Brassica oleracea HOM05D007411 ORTHO05D009025 1.5e-18 97.4 103 44.7
BcaB02g07857 Brassica carinata HOM05D007411 ORTHO05D009025 2.0e-18 97.1 103 46.6
Glyma.01G235100 Glycine max HOM05D007411 ORTHO05D009025 4.5e-18 95.9 117 41.9
Manes.03G176101 Manihot esculenta HOM05D007411 ORTHO05D009025 4.5e-18 95.9 106 47.2
AL7G41060 Arabidopsis lyrata HOM05D007411 ORTHO05D009025 5.8e-18 95.5 103 46.6
Psat7g023320 Pisum sativum HOM05D007411 ORTHO05D009025 5.8e-18 95.5 98 46.9
Lalb_Chr05g0211151 Lupinus albus HOM05D007411 ORTHO05D009025 9.9e-18 94.7 105 43.8
Atru.chr4.2432 Acer truncatum HOM05D007411 ORTHO05D009025 2.2e-17 93.6 93 47.3
Medtr5g006900 Medicago truncatula HOM05D007411 ORTHO05D009025 2.2e-17 93.6 98 44.9
Psat2g190000 Pisum sativum HOM05D007411 ORTHO05D009025 2.2e-17 93.6 98 45.9
A05p15610 Brassica napus HOM05D007411 ORTHO05D009025 2.9e-17 93.2 168 38.1
BraA05t20476Z Brassica rapa HOM05D007411 ORTHO05D009025 3.8e-17 92.8 170 36.5
BcaC08g44271 Brassica carinata HOM05D007411 ORTHO05D009025 4.9e-17 92.4 103 43.7
Thhalv10027383m.g Eutrema salsugineum HOM05D007411 ORTHO05D009025 6.4e-17 92.0 103 42.7
Sc13g0004560 Simmondsia chinensis HOM05D007411 ORTHO05D009025 6.4e-17 92.0 100 42.0
Medtr2g049980 Medicago truncatula HOM05D007411 ORTHO05D009025 8.4e-17 91.7 98 44.9
Phvul.002G042700 Phaseolus vulgaris HOM05D007411 ORTHO05D009025 1.4e-16 90.9 114 39.5
PGR004G0639 Punica granatum HOM05D007411 ORTHO05D009025 2.4e-16 90.1 230 33.9
Cpa.g.sc58.79 Carica papaya HOM05D007411 ORTHO05D009025 3.2e-16 89.7 126 37.3
PSO210G5563 Papaver somniferum HOM05D007411 ORTHO05D009025 4.2e-16 89.4 124 39.5
PSO832G1886 Papaver somniferum HOM05D007411 ORTHO05D009025 4.2e-16 89.4 124 39.5
Thecc.04G235100 Theobroma cacao HOM05D007411 ORTHO05D009025 9.3e-16 88.2 73 49.3
LjContig00222g0003473 Lotus japonicus HOM05D007411 ORTHO05D009025 1.6e-15 87.4 100 46.0
COL.COLO4_21515 Corchorus olitorius HOM05D007411 ORTHO05D009025 2.7e-15 86.7 72 50.0
Carub.0007s2732 Capsella rubella HOM05D007411 ORTHO05D009025 1.8e-14 84.0 88 43.2
Eucgr.H03438 Eucalyptus grandis HOM05D007411 ORTHO05D009025 5.1e-14 82.4 95 43.2
TPR.G3913 Trifolium pratense HOM05D007411 ORTHO05D009025 6.7e-14 82.0 84 45.2
CDE05G0749 Ceratophyllum demersum HOM05D007411 ORTHO05D009025 9.6e-13 78.2 115 36.5
MBI11_g32995_MAGBIO Magnolia biondii HOM05D007411 ORTHO05D009025 8.1e-12 75.1 141 31.9
Potri.008G155300 Populus trichocarpa HOM05D007411 ORTHO05D009025 1.8e-11 73.9 91 41.8
PSO724G0575 Papaver somniferum HOM05D007411 ORTHO05D009025 5.3e-11 72.4 76 42.1
TAR633G1834 Trochodendron aralioides HOM05D007411 ORTHO05D009025 6.9e-11 72.0 89 46.1
FvH4_3g08061 Fragaria vesca HOM05D007411 ORTHO05D009025 3.2e-08 63.2 53 49.1
SEGI_37893 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 9.3e-08 61.6 77 37.7
SEGI_16230 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 2.1e-07 60.5 77 37.7
SEGI_32233 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 2.1e-07 60.5 77 37.7
SEGI_40524 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 4.6e-07 59.3 77 37.7
SEGI_22696 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 7.9e-07 58.5 77 37.7
Lalb_Chr09g0335101 Lupinus albus HOM05D000489 ORTHO05D000372 1.0e-06 58.2 77 40.3
TAR633G0575 Trochodendron aralioides HOM05D007411 ORTHO05D009025 1.8e-06 57.4 76 39.5
ATR0665G366 Amborella trichopoda HOM05D007411 ORTHO05D009025 2.3e-06 57.0 135 32.6
FvH4_2g13381 Fragaria vesca HOM05D003928 ORTHO05D009025 5.1e-06 55.8 58 41.4
SEGI_34685 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 6.7e-06 55.5 113 34.5
ClCG06G014900 Citrullus lanatus HOM05D001204 ORTHO05D009253 8.7e-06 55.1 97 28.9
Zm00001eb408970 Zea mays HOM05D032292 ORTHO05D009025 8.7e-06 55.1 145 28.3


User provided reference genes

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