Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002305g0050 Nicotiana tabacum HOM05D003908 ORTHO05D004488 7.4e-56 220.3 112 100.0
Nitab4.5_0000360g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.8e-54 215.7 111 98.2
Nitab4.5_0002776g0060 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.8e-54 215.7 111 98.2
Nitab4.5_0000443g0180 Nicotiana tabacum HOM05D003908 ORTHO05D004488 3.1e-54 214.9 111 96.4
Actinidia19977 Actinidia chinensis HOM05D003908 ORTHO05D004488 9.0e-54 213.4 111 96.4
Actinidia27523 Actinidia chinensis HOM05D003908 ORTHO05D004488 9.0e-54 213.4 111 96.4
unitig_22.g5278 Utricularia gibba HOM05D003908 ORTHO05D004488 9.0e-54 213.4 111 96.4
SGA_v2.0_scaffold138G35289 Striga asiatica HOM05D003696 ORTHO05D005158 1.5e-53 212.6 111 95.5
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 1.5e-53 212.6 111 95.5
Peaxi162Scf00199g00925 Petunia axillaris HOM05D003908 ORTHO05D004488 2.0e-53 212.2 111 96.4
Dinv34562 Davidia involucrata HOM05D003908 ORTHO05D004488 2.6e-53 211.8 111 94.6
GSVIVG01031574001 Vitis vinifera HOM05D003908 ORTHO05D004488 2.6e-53 211.8 111 94.6
CAN.G1299.5 Capsicum annuum HOM05D003908 ORTHO05D004488 3.4e-53 211.5 111 95.5
MD04G1224300 Malus domestica HOM05D003908 ORTHO05D004488 3.4e-53 211.5 111 93.7
MD12G1241000 Malus domestica HOM05D003908 ORTHO05D004488 3.4e-53 211.5 111 94.6
Solyc02g068450.3 Solanum lycopersicum HOM05D003908 ORTHO05D004488 3.4e-53 211.5 111 96.4
Sopen02g017590 Solanum pennellii HOM05D003908 ORTHO05D004488 3.4e-53 211.5 111 96.4
arahy.Tifrunner.gnm1.ann1.95Q6AF Arachis hypogaea HOM05D003908 ORTHO05D004488 4.5e-53 211.1 111 94.6
Glyma.05G135300 Glycine max HOM05D003908 ORTHO05D004488 5.8e-53 210.7 111 92.8
Glyma.08G090500 Glycine max HOM05D003908 ORTHO05D004488 5.8e-53 210.7 111 92.8
Oeu018177.1 Olea europaea HOM05D003908 ORTHO05D004488 5.8e-53 210.7 111 95.5
arahy.Tifrunner.gnm1.ann1.Y10HXA Arachis hypogaea HOM05D003908 ORTHO05D004488 7.6e-53 210.3 111 93.7
Hma1.2p1_0760F.1_g214230 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 7.6e-53 210.3 111 91.9
arahy.Tifrunner.gnm1.ann1.LT9XWZ Arachis hypogaea HOM05D003908 ORTHO05D004488 1.0e-52 209.9 111 92.8
arahy.Tifrunner.gnm1.ann1.XQ21SD Arachis hypogaea HOM05D003908 ORTHO05D004488 1.0e-52 209.9 110 95.5
Phvul.002G186900 Phaseolus vulgaris HOM05D003908 ORTHO05D004488 1.0e-52 209.9 111 92.8
Prupe.5G006500 Prunus persica HOM05D003908 ORTHO05D004488 1.0e-52 209.9 111 93.7
Prupe.6G005500 Prunus persica HOM05D003908 ORTHO05D004488 1.0e-52 209.9 111 93.7
CiPaw.08G123800 Carya illinoinensis HOM05D003908 ORTHO05D004488 1.3e-52 209.5 111 93.7
PGSC0003DMG400009421 Solanum tuberosum HOM05D003908 ORTHO05D004488 1.3e-52 209.5 111 95.5
Aqoxy5G00367 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 1.7e-52 209.1 111 94.6
CSS0036720 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.7e-52 209.1 111 92.8
CSS0040700 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.7e-52 209.1 111 92.8
ClCG03G017370 Citrullus lanatus HOM05D003908 ORTHO05D004488 1.7e-52 209.1 111 94.6
HanXRQChr03g0088561 Helianthus annuus HOM05D003908 ORTHO05D004488 1.7e-52 209.1 111 92.8
VMungo0251G3698 Vigna mungo HOM05D003908 ORTHO05D004488 1.7e-52 209.1 111 91.9
Aqoxy6G02470 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 2.2e-52 208.8 111 93.7
MSTRG.21514 Avicennia marina HOM05D003908 ORTHO05D004488 2.2e-52 208.8 111 93.7
Hma1.2p1_0172F.1_g076150 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 2.2e-52 208.8 111 92.8
Sed0027410 Sechium edule HOM05D003908 ORTHO05D004488 2.2e-52 208.8 111 93.7
Thecc.01G268300 Theobroma cacao HOM05D003908 ORTHO05D004488 2.2e-52 208.8 111 92.8
Gohir.A08G188000 Gossypium hirsutum HOM05D003908 ORTHO05D004488 2.9e-52 208.4 111 91.9
Gohir.D08G206400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 2.9e-52 208.4 111 91.9
Gorai.004G218600 Gossypium raimondii HOM05D003908 ORTHO05D004488 2.9e-52 208.4 111 91.9
Cfa006421 Carpinus fangiana HOM05D003908 ORTHO05D004488 3.8e-52 208.0 111 92.8
Dinv04731 Davidia involucrata HOM05D003908 ORTHO05D004488 3.8e-52 208.0 111 92.8
Rhsim01G0201300 Rhododendron simsii HOM05D003908 ORTHO05D004488 3.8e-52 208.0 111 92.8
SalBow3G3620 Salvia bowleyana HOM05D003908 ORTHO05D004488 3.8e-52 208.0 111 93.7
CSS0027656 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 4.9e-52 207.6 111 91.9
CSS0040042 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 4.9e-52 207.6 111 92.8
COL.COLO4_15346 Corchorus olitorius HOM05D003908 ORTHO05D004488 4.9e-52 207.6 109 93.6
Eucgr.B02621 Eucalyptus grandis HOM05D003908 ORTHO05D004488 4.9e-52 207.6 111 92.8
Rhsim01G0270200 Rhododendron simsii HOM05D003908 ORTHO05D004488 4.9e-52 207.6 111 92.8
Sed0024016 Sechium edule HOM05D003908 ORTHO05D004488 6.5e-52 207.2 111 92.8
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 6.5e-52 207.2 109 93.6
MELO3C015218.2 Cucumis melo HOM05D003908 ORTHO05D004488 8.4e-52 206.8 109 94.5
CsaV3_1G042520 Cucumis sativus L. HOM05D003908 ORTHO05D004488 8.4e-52 206.8 109 94.5
ECA240G0363 Erigeron canadensis HOM05D003908 ORTHO05D004488 8.4e-52 206.8 111 91.0
MBI07_g21062_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 8.4e-52 206.8 111 91.0
Os02g0824700 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 8.4e-52 206.8 111 91.9
Os04g0137500 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 8.4e-52 206.8 111 91.9
Thecc.05G283700 Theobroma cacao HOM05D003908 ORTHO05D004488 8.4e-52 206.8 111 90.1
TAR633G1149 Trochodendron aralioides HOM05D003908 ORTHO05D004488 8.4e-52 206.8 111 91.9
Ca_18213_v3 Cicer arietinum L. HOM05D003908 ORTHO05D004488 1.1e-51 206.5 111 92.8
Ciclev10002833m.g Citrus clementina HOM05D003908 ORTHO05D004488 1.1e-51 206.5 111 93.7
Duzib138G1305 Durio zibethinus HOM05D003908 ORTHO05D004488 1.1e-51 206.5 111 91.0
Migut.D00367 Erythranthe guttata HOM05D003908 ORTHO05D004488 1.1e-51 206.5 111 93.7
Eucgr.C04384 Eucalyptus grandis HOM05D003908 ORTHO05D004488 1.1e-51 206.5 111 91.9
Lj4g0023890 Lotus japonicus HOM05D003908 ORTHO05D004488 1.1e-51 206.5 111 91.9
Nn3g19495 Nelumbo nucifera HOM05D003908 ORTHO05D004488 1.1e-51 206.5 111 92.8
THA.LOC104825983 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 1.1e-51 206.5 111 91.9
Zm00001eb330190 Zea mays HOM05D003908 ORTHO05D004488 1.4e-51 206.1 111 90.1
Gohir.A08G215400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 1.9e-51 205.7 111 90.1
Gorai.004G246600 Gossypium raimondii HOM05D003908 ORTHO05D004488 1.9e-51 205.7 111 90.1
Peaxi162Scf00198g01017 Petunia axillaris HOM05D003908 ORTHO05D004488 1.9e-51 205.7 123 87.8
Lalb_Chr12g0209211 Lupinus albus HOM05D003908 ORTHO05D004488 2.5e-51 205.3 111 91.0
MBI10_g16831_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 2.5e-51 205.3 111 91.9
PGR031G1854 Punica granatum HOM05D003908 ORTHO05D004488 2.5e-51 205.3 111 92.8
CANSAT21G0496 Cannabis sativa HOM05D003908 ORTHO05D004488 3.2e-51 204.9 111 92.8
Lj1g0011223 Lotus japonicus HOM05D003908 ORTHO05D004488 3.2e-51 204.9 111 92.8
QL03p025800 Quercus lobata HOM05D003908 ORTHO05D004488 3.2e-51 204.9 110 92.7
THA.LOC104801254 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 4.2e-51 204.5 111 91.0
Zm00001eb111070 Zea mays HOM05D003908 ORTHO05D004488 5.5e-51 204.1 111 89.2
ATR0787G044 Amborella trichopoda HOM05D003908 ORTHO05D004488 7.1e-51 203.8 111 92.8
CSS0045088 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 7.1e-51 203.8 112 90.2
Cc09_g07930 Coffea canephora HOM05D003908 ORTHO05D004488 7.1e-51 203.8 111 90.1
Duzib106G0327 Durio zibethinus HOM05D003908 ORTHO05D004488 7.1e-51 203.8 109 89.9
Manes.07G050600 Manihot esculenta HOM05D003908 ORTHO05D004488 7.1e-51 203.8 111 91.0
Psat7g086640 Pisum sativum HOM05D003908 ORTHO05D004488 9.3e-51 203.4 111 91.0
TWI12G1100 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 9.3e-51 203.4 111 90.1
Atru.chr2.813 Acer truncatum HOM05D003908 ORTHO05D004488 1.2e-50 203.0 111 91.0
Ah.02g111400 Amaranthus hybridus HOM05D003908 ORTHO05D004488 1.2e-50 203.0 109 90.8
TPR.G34752 Trifolium pratense HOM05D003908 ORTHO05D004488 1.2e-50 203.0 111 90.1
Atru.chr4.2009 Acer truncatum HOM05D003908 ORTHO05D004488 1.6e-50 202.6 111 91.0
FAN05G0658 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.6e-50 202.6 111 90.1
FAN09G2689 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.6e-50 202.6 111 90.1
Sabra05G0166800 Salix brachista HOM05D003908 ORTHO05D004488 1.6e-50 202.6 111 91.9
Potri.005G217600 Populus trichocarpa HOM05D003908 ORTHO05D004488 2.1e-50 202.2 111 91.0
HPP92_018775 Vanilla planifolia HOM05D003908 ORTHO05D004488 2.1e-50 202.2 111 87.4
RcHm_v2.0_Chr3g0451151 Rosa chinensis HOM05D003908 ORTHO05D004488 2.7e-50 201.8 111 90.1
HPP92_001854 Vanilla planifolia HOM05D003908 ORTHO05D004488 2.7e-50 201.8 111 88.3
Aa31LG5G2250 Aethionema arabicum HOM05D003908 ORTHO05D004488 3.5e-50 201.4 111 88.3
Cpa.g.sc117.89 Carica papaya HOM05D003908 ORTHO05D004488 3.5e-50 201.4 111 89.2
Lsat_1_v5_gn_6_91060 Lactuca sativa HOM05D003908 ORTHO05D004488 3.5e-50 201.4 111 88.3
FvH4_6g02960 Fragaria vesca HOM05D003908 ORTHO05D004488 4.6e-50 201.1 111 89.2
Gohir.D08G232100 Gossypium hirsutum HOM05D003908 ORTHO05D004488 4.6e-50 201.1 111 89.2
Hund02874 Selenicereus undatus HOM05D003908 ORTHO05D004488 4.6e-50 201.1 109 89.9
CDE09G0316 Ceratophyllum demersum HOM05D003908 ORTHO05D004488 6.0e-50 200.7 109 89.0
Duzib133G0635 Durio zibethinus HOM05D003908 ORTHO05D004488 6.0e-50 200.7 111 90.1
PSO210G0243 Papaver somniferum HOM05D003908 ORTHO05D004488 7.9e-50 200.3 111 90.1
PSO832G4196 Papaver somniferum HOM05D003908 ORTHO05D004488 7.9e-50 200.3 111 90.1
FAN14G5491 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.8e-49 199.1 111 88.3
TWI18G0751 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 1.8e-49 199.1 111 88.3
Gohir.A13G052900 Gossypium hirsutum HOM05D003908 ORTHO05D004488 2.3e-49 198.7 111 89.2
Actinidia24932 Actinidia chinensis HOM05D005044 ORTHO05D006799 3.9e-49 198.0 103 94.2
EL10Ac5g10467 Beta vulgaris HOM05D003908 ORTHO05D004488 5.1e-49 197.6 110 88.2
PSO135G0069 Papaver somniferum HOM05D003908 ORTHO05D004488 5.1e-49 197.6 111 89.2
PSO384G1262 Papaver somniferum HOM05D003908 ORTHO05D004488 6.7e-49 197.2 111 89.2
Sc17g0001030 Simmondsia chinensis HOM05D003908 ORTHO05D004488 6.7e-49 197.2 111 87.4
Thhalv10029066m.g Eutrema salsugineum HOM05D003908 ORTHO05D004488 1.5e-48 196.1 106 88.7
Gorai.013G079800 Gossypium raimondii HOM05D003908 ORTHO05D004488 1.5e-48 196.1 111 88.3
vmacro14877 Vaccinium macrocarpon HOM05D003908 ORTHO05D004488 1.9e-48 195.7 104 94.2
Sp6g02530 Schrenkiella parvula HOM05D003908 ORTHO05D004488 4.3e-48 194.5 106 87.7
BcaB01g02026 Brassica carinata HOM05D003908 ORTHO05D004488 5.7e-48 194.1 106 86.8
BcaB01g02477 Brassica carinata HOM05D003908 ORTHO05D004488 5.7e-48 194.1 106 86.8
BcaC04g24002 Brassica carinata HOM05D003908 ORTHO05D004488 5.7e-48 194.1 106 86.8
A03p30970 Brassica napus HOM05D003908 ORTHO05D004488 5.7e-48 194.1 106 86.8
A09p02050 Brassica napus HOM05D003908 ORTHO05D004488 5.7e-48 194.1 106 86.8
C09p02140 Brassica napus HOM05D003908 ORTHO05D004488 5.7e-48 194.1 106 86.8
BolC9t53144H Brassica oleracea HOM05D003908 ORTHO05D004488 5.7e-48 194.1 106 86.8
BraA03t12274Z Brassica rapa HOM05D003908 ORTHO05D004488 7.4e-48 193.7 106 86.8
BraA09t35854Z Brassica rapa HOM05D003908 ORTHO05D004488 9.7e-48 193.4 105 87.6
Gohir.D13G069500 Gossypium hirsutum HOM05D003908 ORTHO05D004488 9.7e-48 193.4 111 86.5
BcaC01g06745 Brassica carinata HOM05D003908 ORTHO05D004488 1.3e-47 193.0 106 85.8
C03p37740 Brassica napus HOM05D003908 ORTHO05D004488 1.3e-47 193.0 106 85.8
BolC3t16064H Brassica oleracea HOM05D003908 ORTHO05D004488 1.3e-47 193.0 106 85.8
CARHR250910 Cardamine hirsuta HOM05D003908 ORTHO05D004488 1.3e-47 193.0 106 84.9
AL6G50430 Arabidopsis lyrata HOM05D003908 ORTHO05D004488 1.6e-47 192.6 106 84.9
AT4G02620 Arabidopsis thaliana HOM05D003908 ORTHO05D004488 1.6e-47 192.6 106 84.9
Carub.0006s3452 Capsella rubella HOM05D003908 ORTHO05D004488 1.6e-47 192.6 106 84.9
Ciclev10022651m.g Citrus clementina HOM05D003908 ORTHO05D004488 2.2e-47 192.2 110 89.1
C02p39240 Brassica napus HOM05D003908 ORTHO05D004488 4.8e-47 191.0 105 86.7
BolC2t09935H Brassica oleracea HOM05D003908 ORTHO05D004488 1.4e-46 189.5 105 85.7
CSS0024256 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.2e-45 186.4 100 91.0
CSS0029390 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.2e-45 186.4 100 91.0
CSS0046821 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.2e-45 186.4 100 91.0
Pp3c6_17470 Physcomitrium patens HOM05D003908 ORTHO05D004488 2.0e-45 185.7 110 77.3
Pp3c25_8080 Physcomitrium patens HOM05D003908 ORTHO05D004488 4.5e-45 184.5 112 78.6
Mapoly0079s0004 Marchantia polymorpha HOM05D003908 ORTHO05D004488 5.0e-44 181.0 107 77.6
CDE11G1041 Ceratophyllum demersum HOM05D005443 ORTHO05D004488 1.9e-43 179.1 96 89.6
CSS0043230 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 4.2e-43 177.9 100 87.0
SMO367G0680 Selaginella moellendorffii HOM05D003908 ORTHO05D004488 2.7e-42 175.3 110 72.7
Actinidia04661 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.3e-41 172.9 110 82.7
Actinidia21151 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.3e-41 172.9 110 82.7
BcaC03g16154 Brassica carinata HOM05D003908 ORTHO05D004488 3.0e-41 171.8 98 83.7
Haze_21722 Corylus avellana HOM05D003908 ORTHO05D004488 3.3e-40 168.3 109 78.9
CBR_g38932 Chara braunii HOM05D003908 ORTHO05D004488 7.4e-40 167.2 109 71.6
CSS0044738 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 2.2e-39 165.6 97 84.5
CSS0038153 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.1e-38 163.3 100 82.0
Haze_04363 Corylus avellana HOM05D003908 ORTHO05D004488 7.7e-37 157.1 89 88.8
TAR362G1230 Trochodendron aralioides HOM05D003908 ORTHO05D004488 2.9e-36 155.2 103 78.6
COL.COLO4_06708 Corchorus olitorius HOM05D003908 ORTHO05D004488 3.8e-36 154.8 82 92.7
PRCOL_00000544 Prasinoderma coloniale HOM05D003908 ORTHO05D004488 5.0e-36 154.5 108 63.9
Ah.11g050040 Amaranthus hybridus HOM05D005044 ORTHO05D006799 1.9e-35 152.5 82 91.5
CiPaw.04G181400 Carya illinoinensis HOM05D003908 ORTHO05D004488 4.2e-35 151.4 81 91.4
MCO03G460 Micromonas commoda HOM05D003908 ORTHO05D004488 9.4e-35 150.2 107 65.4
Cre10.g446550 Chlamydomonas reinhardtii HOM05D003908 ORTHO05D004488 3.0e-33 145.2 99 67.7
COL.COLO4_30210 Corchorus olitorius HOM05D003908 ORTHO05D004488 7.4e-32 140.6 111 68.5
Hund09564 Selenicereus undatus HOM05D003908 ORTHO05D004488 1.8e-30 136.0 109 66.1
SEGI_40634 Sequoiadendron giganteum HOM05D003908 ORTHO05D004488 2.1e-26 122.5 78 76.9
BcaB05g23651 Brassica carinata HOM05D003908 ORTHO05D004488 1.0e-25 120.2 112 58.9
Nitab4.5_0000138g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.0e-25 120.2 63 95.2
Nitab4.5_0008708g0010 Nicotiana tabacum HOM05D003908 ORTHO05D004488 2.0e-24 115.9 68 83.8
AagrBONN_evm.TU.Sc2ySwM_368.148 Anthoceros agrestis HOM05D003908 ORTHO05D004488 2.2e-23 112.5 70 72.9
Haze_26154 Corylus avellana HOM05D003908 ORTHO05D004488 7.0e-22 107.5 105 45.7
Lalb_Chr20g0122801 Lupinus albus HOM05D003908 ORTHO05D004488 2.6e-21 105.5 60 83.3
Lalb_Chr20g0122811 Lupinus albus HOM05D003908 ORTHO05D004488 4.5e-21 104.8 55 94.5
DCAR_018445 Daucus carota HOM05D003908 ORTHO05D004488 1.7e-20 102.8 52 96.2
DCAR_012514 Daucus carota HOM05D003908 ORTHO05D004488 2.2e-20 102.4 52 96.2
SHI24544 Sapria himalayana HOM05D003908 ORTHO05D000023 1.5e-19 99.8 62 75.8
Sopen12g012850 Solanum pennellii HOM05D003908 ORTHO05D004488 1.2e-16 90.1 58 84.5
Actinidia30711 Actinidia chinensis HOM05D005044 ORTHO05D006799 1.1e-14 83.6 49 79.6
Peaxi162Scf01294g00317 Petunia axillaris HOM05D003908 ORTHO05D004488 5.5e-11 71.2 35 94.3
CSS0012932 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 7.2e-11 70.9 35 88.6
AUR62011951 Chenopodium quinoa HOM05D003908 ORTHO05D004488 2.4e-06 55.8 28 89.3


User provided reference genes

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