Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002302g0110 Nicotiana tabacum HOM05D003613 ORTHO05D004055 1.1e-50 203.0 102 100.0
PGSC0003DMG400014438 Solanum tuberosum HOM05D003613 ORTHO05D004055 9.2e-21 103.6 98 59.2
SGA_v2.0_scaffold74G24606 Striga asiatica HOM05D003613 ORTHO05D004055 1.1e-18 96.7 62 82.3
Solyc12g042540.1 Solanum lycopersicum HOM05D003613 ORTHO05D004055 1.5e-18 96.3 98 56.1
Sopen12g021630 Solanum pennellii HOM05D003613 ORTHO05D004055 1.5e-18 96.3 98 55.1
Nitab4.5_0005437g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 7.3e-18 94.0 62 80.6
SGA_v2.0_scaffold515G52657 Striga asiatica HOM05D003613 ORTHO05D004055 8.0e-17 90.5 62 75.8
Nitab4.5_0005937g0030 Nicotiana tabacum HOM05D003613 ORTHO05D004055 8.9e-16 87.0 59 79.7
Oeu051549.1 Olea europaea HOM05D003613 ORTHO05D004055 2.6e-15 85.5 62 77.4
MSTRG.9389 Avicennia marina HOM05D003613 ORTHO05D004055 3.4e-15 85.1 62 74.2
Cc04_g05380 Coffea canephora HOM05D003613 ORTHO05D004055 3.4e-15 85.1 94 54.3
Peaxi162Scf00195g00118 Petunia axillaris HOM05D003613 ORTHO05D004055 1.7e-14 82.8 57 77.2
Sopen03g036670 Solanum pennellii HOM05D003613 ORTHO05D004055 2.9e-14 82.0 62 69.4
PGSC0003DMG400014217 Solanum tuberosum HOM05D003613 ORTHO05D004055 2.9e-14 82.0 62 69.4
MSTRG.22838 Avicennia marina HOM05D003613 ORTHO05D004055 3.7e-14 81.6 62 74.2
unitig_22.g6276 Utricularia gibba HOM05D003613 ORTHO05D004055 3.7e-14 81.6 62 72.6
Nitab4.5_0002700g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 4.9e-14 81.3 53 81.1
Oeu033454.1 Olea europaea HOM05D003613 ORTHO05D004055 6.4e-14 80.9 62 71.0
CAN.G1008.14 Capsicum annuum HOM05D003613 ORTHO05D004055 1.4e-13 79.7 62 66.1
Dinv21437 Davidia involucrata HOM05D003613 ORTHO05D004055 1.4e-13 79.7 62 74.2
MSTRG.11218 Avicennia marina HOM05D003613 ORTHO05D004055 1.8e-13 79.3 62 71.0
vmacro19080 Vaccinium macrocarpon HOM05D003613 ORTHO05D004055 5.4e-13 77.8 62 64.5
Rhsim08G0202400 Rhododendron simsii HOM05D003613 ORTHO05D004055 7.0e-13 77.4 62 62.9
Rhsim12G0183300 Rhododendron simsii HOM05D003613 ORTHO05D004055 2.0e-12 75.9 62 64.5
SalBow1G4637 Salvia bowleyana HOM05D003613 ORTHO05D004055 4.6e-12 74.7 62 67.7
Migut.D01149 Erythranthe guttata HOM05D003613 ORTHO05D004055 6.0e-12 74.3 62 64.5
unitig_8.g3041 Utricularia gibba HOM05D003613 ORTHO05D004055 3.9e-11 71.6 62 62.9
Actinidia36859 Actinidia chinensis HOM05D000338 ORTHO05D003721 5.0e-11 71.2 66 60.6
GSVIVG01016088001 Vitis vinifera HOM05D003613 ORTHO05D004055 8.6e-11 70.5 63 66.7
Solyc03g117760.4 Solanum lycopersicum HOM05D003613 ORTHO05D004055 1.5e-10 69.7 98 43.9
CSS0042010 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 1.9e-10 69.3 64 62.5
ECA246G2284 Erigeron canadensis HOM05D003613 ORTHO05D004055 1.9e-10 69.3 62 67.7
Lsat_1_v5_gn_5_9061 Lactuca sativa HOM05D003613 ORTHO05D004055 1.9e-10 69.3 62 66.1
Nn8g40130 Nelumbo nucifera HOM05D003613 ORTHO05D004055 2.5e-10 68.9 95 47.4
HanXRQChr05g0157501 Helianthus annuus HOM05D003613 ORTHO05D004055 3.3e-10 68.6 62 67.7
CSS0016880 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 5.6e-10 67.8 66 63.6
DCAR_025611 Daucus carota HOM05D003613 ORTHO05D004055 5.6e-10 67.8 62 64.5
ECA232G3259 Erigeron canadensis HOM05D003613 ORTHO05D004055 1.6e-09 66.2 62 61.3
Migut.I00632 Erythranthe guttata HOM05D003613 ORTHO05D004055 2.1e-09 65.9 64 64.1
Nn2g12477 Nelumbo nucifera HOM05D003613 ORTHO05D004055 4.7e-09 64.7 63 58.7
Ah.12g055300 Amaranthus hybridus HOM05D003613 ORTHO05D004055 8.0e-09 63.9 62 59.7
TAR626G0045 Trochodendron aralioides HOM05D003147 ORTHO05D004055 1.1e-08 63.5 63 60.3
Lsat_1_v5_gn_4_84900 Lactuca sativa HOM05D003613 ORTHO05D004055 1.4e-08 63.2 62 59.7
Aqoxy5G00706 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 3.1e-08 62.0 62 59.7
ECA247G1662 Erigeron canadensis HOM05D003613 ORTHO05D004055 4.0e-08 61.6 62 62.9
Ciclev10026842m.g Citrus clementina HOM05D003613 ORTHO05D004055 5.2e-08 61.2 62 62.9
MBI14_g16433_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 6.8e-08 60.8 62 54.8
Potri.001G040300 Populus trichocarpa HOM05D003613 ORTHO05D004055 2.0e-07 59.3 62 62.9
TAR383G0763 Trochodendron aralioides HOM05D003613 ORTHO05D004055 2.0e-07 59.3 60 58.3
HanXRQChr04g0100011 Helianthus annuus HOM05D003613 ORTHO05D004055 4.4e-07 58.2 62 58.1
TWI75G1756 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 4.4e-07 58.2 62 61.3
Carub.0001s1593 Capsella rubella HOM05D003613 ORTHO05D004055 5.8e-07 57.8 49 67.3
COL.COLO4_30901 Corchorus olitorius HOM05D003613 ORTHO05D004055 5.8e-07 57.8 45 71.1
Gohir.A10G049000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 5.8e-07 57.8 46 73.9
Gohir.D10G049600 Gossypium hirsutum HOM05D003613 ORTHO05D004055 5.8e-07 57.8 46 73.9
Gorai.011G053100 Gossypium raimondii HOM05D003613 ORTHO05D004055 5.8e-07 57.8 46 73.9
Potri.001G038750 Populus trichocarpa HOM05D003613 ORTHO05D004055 7.5e-07 57.4 62 61.3
AL2G40350 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 9.8e-07 57.0 49 63.3
AT1G79660 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 9.8e-07 57.0 49 63.3
Duzib192G0866 Durio zibethinus HOM05D003613 ORTHO05D004055 9.8e-07 57.0 62 56.5
Gohir.A06G141700 Gossypium hirsutum HOM05D003613 ORTHO05D004055 9.8e-07 57.0 62 58.1
Gohir.D06G146000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 9.8e-07 57.0 62 58.1
Gorai.010G170200 Gossypium raimondii HOM05D003613 ORTHO05D004055 9.8e-07 57.0 62 58.1
QL12p003368 Quercus lobata HOM05D003613 ORTHO05D004055 9.8e-07 57.0 96 43.8
AUR62018676 Chenopodium quinoa HOM05D003613 ORTHO05D004055 1.3e-06 56.6 65 53.8
Duzib235G1294 Durio zibethinus HOM05D003613 ORTHO05D004055 1.3e-06 56.6 62 58.1
Manes.11G070600 Manihot esculenta HOM05D003613 ORTHO05D004055 1.3e-06 56.6 46 71.7
Glyma.13G250700 Glycine max HOM05D003613 ORTHO05D004055 1.7e-06 56.2 54 64.8
Os08g0266200 Oryza sativa ssp. japonica HOM05D003613 ORTHO05D004055 1.7e-06 56.2 63 55.6
SHI11349 Sapria himalayana HOM05D003613 ORTHO05D004055 1.7e-06 56.2 62 58.1
Carub.0002s2654 Capsella rubella HOM05D003613 ORTHO05D004055 2.2e-06 55.8 49 61.2
CARHR016650 Cardamine hirsuta HOM05D003613 ORTHO05D004055 2.2e-06 55.8 49 63.3
CARHR073400 Cardamine hirsuta HOM05D003613 ORTHO05D004055 2.2e-06 55.8 49 63.3
Thhalv10009201m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 2.2e-06 55.8 49 63.3
Glyma.15G063700 Glycine max HOM05D003613 ORTHO05D004055 2.2e-06 55.8 46 69.6
Potri.001G038200 Populus trichocarpa HOM05D003613 ORTHO05D004055 2.2e-06 55.8 62 59.7
Sp5g34740 Schrenkiella parvula HOM05D003613 ORTHO05D004055 2.2e-06 55.8 49 61.2
Aa31LG4G1310 Aethionema arabicum HOM05D003613 ORTHO05D004055 2.9e-06 55.5 49 63.3
BcaC03g14996 Brassica carinata HOM05D003613 ORTHO05D004055 2.9e-06 55.5 62 51.6
C02p25300 Brassica napus HOM05D003613 ORTHO05D004055 2.9e-06 55.5 62 51.6
BolC2t08604H Brassica oleracea HOM05D003613 ORTHO05D004055 2.9e-06 55.5 62 51.6
Thhalv10019378m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 2.9e-06 55.5 49 61.2
MBI15_g26076_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 2.9e-06 55.5 66 50.0
Sp1g14410 Schrenkiella parvula HOM05D003613 ORTHO05D004055 2.9e-06 55.5 49 63.3
Thecc.06G133700 Theobroma cacao HOM05D003613 ORTHO05D004055 2.9e-06 55.5 62 56.5
TPR.G13916 Trifolium pratense HOM05D003613 ORTHO05D004055 2.9e-06 55.5 49 63.3
TWI31G1088 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 2.9e-06 55.5 62 59.7
BcaB03g14503 Brassica carinata HOM05D003613 ORTHO05D004055 3.7e-06 55.1 64 53.1
A09p61000 Brassica napus HOM05D003613 ORTHO05D004055 3.7e-06 55.1 64 53.1
C08p44600 Brassica napus HOM05D003613 ORTHO05D004055 3.7e-06 55.1 64 53.1
BolC8t52006H Brassica oleracea HOM05D003613 ORTHO05D004055 3.7e-06 55.1 64 53.1
BraA09t41473Z Brassica rapa HOM05D003613 ORTHO05D004055 3.7e-06 55.1 64 53.1
MD09G1229400 Malus domestica HOM05D003613 ORTHO05D004055 3.7e-06 55.1 46 69.6
Manes.04G099000 Manihot esculenta HOM05D003613 ORTHO05D004055 3.7e-06 55.1 62 56.5
AL1G28300 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 4.9e-06 54.7 49 65.3
Eucgr.F03989 Eucalyptus grandis HOM05D003613 ORTHO05D004055 4.9e-06 54.7 62 56.5
Lalb_Chr09g0327111 Lupinus albus HOM05D003613 ORTHO05D004055 4.9e-06 54.7 46 63.0
Prupe.3G105500 Prunus persica HOM05D003613 ORTHO05D004055 4.9e-06 54.7 46 67.4
THA.LOC104813597 Tarenaya hassleriana HOM05D003613 ORTHO05D004055 4.9e-06 54.7 52 59.6
Atru.chr1.2819 Acer truncatum HOM05D003613 ORTHO05D004055 6.4e-06 54.3 62 58.1
ATR0580G444 Amborella trichopoda HOM05D003613 ORTHO05D004055 6.4e-06 54.3 63 54.0
ClCG09G003430 Citrullus lanatus HOM05D003613 ORTHO05D004055 6.4e-06 54.3 62 58.1
ClCG10G012830 Citrullus lanatus HOM05D003613 ORTHO05D004055 6.4e-06 54.3 62 54.8
MELO3C024884.2 Cucumis melo HOM05D003613 ORTHO05D004055 6.4e-06 54.3 62 54.8
CsaV3_3G032670 Cucumis sativus L. HOM05D003613 ORTHO05D004055 6.4e-06 54.3 62 54.8
Duzib160G0323 Durio zibethinus HOM05D003613 ORTHO05D004055 6.4e-06 54.3 62 56.5
Lalb_Chr19g0125611 Lupinus albus HOM05D003613 ORTHO05D004055 6.4e-06 54.3 62 58.1
BcaB03g13047 Brassica carinata HOM05D003613 ORTHO05D004055 8.3e-06 53.9 49 61.2
BolC8t51544H Brassica oleracea HOM05D003613 ORTHO05D004055 8.3e-06 53.9 49 61.2
Glyma.01G154800 Glycine max HOM05D003613 ORTHO05D004055 8.3e-06 53.9 51 62.7
Lalb_Chr16g0383261 Lupinus albus HOM05D003613 ORTHO05D004055 8.3e-06 53.9 46 63.0
Lalb_Chr20g0122601 Lupinus albus HOM05D003613 ORTHO05D004055 8.3e-06 53.9 48 64.6
Sabra03G0136400 Salix brachista HOM05D003613 ORTHO05D004055 8.3e-06 53.9 62 58.1


User provided reference genes

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