Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002297g0090 Nicotiana tabacum HOM05D006104 ORTHO05D008303 9.0e-279 963.0 500 100.0
Nitab4.5_0008083g0020 Nicotiana tabacum HOM05D006104 ORTHO05D008303 4.4e-217 758.1 433 91.7
PGSC0003DMG400021455 Solanum tuberosum HOM05D006104 ORTHO05D008303 5.2e-186 654.8 444 81.5
Sopen02g011830 Solanum pennellii HOM05D006104 ORTHO05D008303 9.5e-180 634.0 444 79.7
Peaxi162Scf00784g00028 Petunia axillaris HOM05D006104 ORTHO05D008303 2.2e-176 622.9 445 78.0
Solyc02g036470.4 Solanum lycopersicum HOM05D006104 ORTHO05D008303 2.2e-176 622.9 444 78.6
CAN.G304.9 Capsicum annuum HOM05D006104 ORTHO05D008303 2.4e-159 566.2 437 73.2
Rhsim10G0186700 Rhododendron simsii HOM05D006104 ORTHO05D008303 2.3e-149 533.1 379 75.2
Dinv19095 Davidia involucrata HOM05D006104 ORTHO05D008303 8.7e-149 531.2 392 73.5
MSTRG.15618 Avicennia marina HOM05D006104 ORTHO05D008303 1.5e-148 530.4 364 76.1
SGA_v2.0_scaffold199G41251 Striga asiatica HOM05D006104 ORTHO05D008303 5.7e-148 528.5 389 71.2
arahy.Tifrunner.gnm1.ann1.B0P6V2 Arachis hypogaea HOM05D006104 ORTHO05D008303 9.0e-146 521.2 371 74.4
arahy.Tifrunner.gnm1.ann1.W9ZMNH Arachis hypogaea HOM05D006104 ORTHO05D008303 1.5e-145 520.4 371 73.9
Migut.K01201 Erythranthe guttata HOM05D006104 ORTHO05D008303 2.2e-144 516.5 357 74.8
Hund22221 Selenicereus undatus HOM05D006104 ORTHO05D008303 1.9e-143 513.5 359 71.0
Oeu058858.1 Olea europaea HOM05D006104 ORTHO05D008303 3.2e-143 512.7 298 84.6
PSO063G5766 Papaver somniferum HOM05D006104 ORTHO05D008303 2.1e-142 510.0 389 70.4
Cpa.g.sc108.21 Carica papaya HOM05D006104 ORTHO05D008303 3.5e-142 509.2 337 76.6
AUR62037537 Chenopodium quinoa HOM05D006104 ORTHO05D008303 3.5e-142 509.2 416 64.7
Glyma.18G047900 Glycine max HOM05D006104 ORTHO05D008303 4.6e-142 508.8 358 74.6
CiPaw.03G009900 Carya illinoinensis HOM05D006104 ORTHO05D008303 6.1e-142 508.4 356 74.4
ECA232G1605 Erigeron canadensis HOM05D006104 ORTHO05D008303 1.3e-141 507.3 377 71.1
Thecc.04G056600 Theobroma cacao HOM05D006104 ORTHO05D008303 1.3e-141 507.3 377 71.4
FAN18G3652 Fragaria x ananassa HOM05D006104 ORTHO05D008303 2.3e-141 506.5 344 75.6
AUR62035547 Chenopodium quinoa HOM05D006104 ORTHO05D008303 3.9e-141 505.8 422 64.5
Glyma.11G202900 Glycine max HOM05D006104 ORTHO05D008303 3.9e-141 505.8 358 74.0
FvH4_5g39720 Fragaria vesca HOM05D006104 ORTHO05D008303 1.1e-140 504.2 415 66.7
Ah.06g191390 Amaranthus hybridus HOM05D006104 ORTHO05D008303 1.9e-140 503.4 425 63.5
Gorai.008G055000 Gossypium raimondii HOM05D006104 ORTHO05D008303 2.5e-140 503.1 382 69.9
Potri.012G145300 Populus trichocarpa HOM05D006104 ORTHO05D008303 7.4e-140 501.5 371 71.4
Haze_14041 Corylus avellana HOM05D006104 ORTHO05D008303 2.8e-139 499.6 447 63.1
Gohir.D12G051700 Gossypium hirsutum HOM05D006104 ORTHO05D008303 2.8e-139 499.6 397 68.0
Lj6g0001971 Lotus japonicus HOM05D006104 ORTHO05D008303 4.8e-139 498.8 383 70.2
RcHm_v2.0_Chr7g0242021 Rosa chinensis HOM05D006104 ORTHO05D008303 4.8e-139 498.8 381 70.1
CANSAT78G2105 Cannabis sativa HOM05D006104 ORTHO05D008303 6.3e-139 498.4 354 73.4
Cfa008019 Carpinus fangiana HOM05D006104 ORTHO05D008303 6.3e-139 498.4 449 62.4
HanXRQChr15g0486461 Helianthus annuus HOM05D006104 ORTHO05D008303 6.9e-138 495.0 381 68.8
DCAR_003391 Daucus carota HOM05D006104 ORTHO05D008303 9.0e-138 494.6 292 83.6
EL10Ac1g01448 Beta vulgaris HOM05D006104 ORTHO05D008303 1.5e-137 493.8 372 67.7
TAR371G0041 Trochodendron aralioides HOM05D006104 ORTHO05D008303 1.5e-137 493.8 379 70.4
QL02p055508 Quercus lobata HOM05D006104 ORTHO05D008303 4.5e-137 492.3 394 67.3
Aa31LG5G13170 Aethionema arabicum HOM05D006104 ORTHO05D008303 1.0e-136 491.1 445 60.7
Ciclev10011871m.g Citrus clementina HOM05D006104 ORTHO05D008303 2.9e-136 489.6 409 65.8
MBI06_g37978_MAGBIO Magnolia biondii HOM05D006104 ORTHO05D008303 2.9e-136 489.6 344 74.4
Ca_15100_v3 Cicer arietinum L. HOM05D006104 ORTHO05D008303 3.8e-136 489.2 409 67.0
Duzib138G0961 Durio zibethinus HOM05D006104 ORTHO05D008303 5.0e-136 488.8 435 63.9
Lsat_1_v5_gn_8_114940 Lactuca sativa HOM05D006104 ORTHO05D008303 1.4e-135 487.3 445 62.0
MD09G1187600 Malus domestica HOM05D006104 ORTHO05D008303 3.2e-135 486.1 345 73.0
CARHR076690 Cardamine hirsuta HOM05D006104 ORTHO05D008303 5.5e-135 485.3 440 62.0
THA.LOC104820927 Tarenaya hassleriana HOM05D006104 ORTHO05D008303 1.2e-134 484.2 349 72.8
Thhalv10020801m.g Eutrema salsugineum HOM05D006104 ORTHO05D008303 1.6e-134 483.8 439 63.8
Atru.chr1.2189 Acer truncatum HOM05D006104 ORTHO05D008303 2.1e-134 483.4 293 82.3
Carub.0003s0179 Capsella rubella HOM05D006104 ORTHO05D008303 2.7e-134 483.0 441 61.2
Sp3g01720 Schrenkiella parvula HOM05D006104 ORTHO05D008303 2.7e-134 483.0 443 61.6
ClCG01G008400 Citrullus lanatus HOM05D006104 ORTHO05D008303 7.9e-134 481.5 450 60.0
Eucgr.J01650 Eucalyptus grandis HOM05D006104 ORTHO05D008303 1.4e-133 480.7 291 80.1
BraA01t04624Z Brassica rapa HOM05D006104 ORTHO05D008303 3.0e-133 479.6 385 66.8
PGR042G1876 Punica granatum HOM05D006104 ORTHO05D008303 1.1e-132 477.6 343 71.4
Medtr3g063240 Medicago truncatula HOM05D006104 ORTHO05D008303 1.5e-132 477.2 329 74.5
BolC1t05884H Brassica oleracea HOM05D006104 ORTHO05D008303 2.0e-132 476.9 385 66.5
TWI74G1645 Tripterygium wilfordii HOM05D006104 ORTHO05D008303 4.3e-132 475.7 442 62.0
CDE04G1404 Ceratophyllum demersum HOM05D006104 ORTHO05D008303 9.7e-132 474.6 347 69.7
FAN08G3450 Fragaria x ananassa HOM05D006104 ORTHO05D008303 9.7e-132 474.6 424 61.6
BNapus_Darmor_BZH_scaffold_122p00170 Brassica napus HOM05D006104 ORTHO05D008303 1.3e-131 474.2 442 61.3
Lj4A249G56 Lonicera japonica HOM05D006104 ORTHO05D008303 1.8e-130 470.3 292 81.5
Nn4g25028 Nelumbo nucifera HOM05D006104 ORTHO05D008303 1.8e-130 470.3 399 64.7
AL3G12080 Arabidopsis lyrata HOM05D006104 ORTHO05D008303 1.2e-129 467.6 442 60.6
ATR0124G053 Amborella trichopoda HOM05D006104 ORTHO05D008303 1.5e-129 467.2 349 68.8
Medtr3g063250 Medicago truncatula HOM05D006104 ORTHO05D008303 1.5e-129 467.2 356 69.9
Zm00001eb044830 Zea mays HOM05D006104 ORTHO05D008303 2.6e-129 466.5 368 66.0
Cc07_g12610 Coffea canephora HOM05D006104 ORTHO05D008303 3.4e-129 466.1 279 83.5
Sabra12G0109100 Salix brachista HOM05D006104 ORTHO05D008303 3.4e-129 466.1 396 63.9
Phvul.006G083500 Phaseolus vulgaris HOM05D006104 ORTHO05D008303 4.5e-129 465.7 362 66.6
Actinidia32997 Actinidia chinensis HOM05D006104 ORTHO05D008303 5.9e-129 465.3 440 61.1
AT3G02690 Arabidopsis thaliana HOM05D006104 ORTHO05D008303 1.0e-128 464.5 336 71.1
Gohir.A12G053200 Gossypium hirsutum HOM05D006104 ORTHO05D008303 1.3e-128 464.2 324 74.7
Aqoxy3G04351 Aquilegia oxysepala HOM05D006104 ORTHO05D008303 1.7e-128 463.8 361 68.1
Lalb_Chr18g0053941 Lupinus albus HOM05D006104 ORTHO05D008303 2.2e-128 463.4 358 68.2
VMungo0540G0919 Vigna mungo HOM05D006104 ORTHO05D008303 5.0e-128 462.2 356 67.7
HPP92_022205 Vanilla planifolia HOM05D006104 ORTHO05D008303 1.4e-127 460.7 380 65.5
GSVIVG01033198001 Vitis vinifera HOM05D006104 ORTHO05D008303 2.7e-126 456.4 275 84.4
AagrBONN_evm.TU.Sc2ySwM_368.1984 Anthoceros agrestis HOM05D006104 ORTHO05D008303 5.7e-124 448.7 367 66.2
Sc09g0004650 Simmondsia chinensis HOM05D006104 ORTHO05D008303 1.4e-122 444.1 339 67.6
MELO3C025108.2 Cucumis melo HOM05D006104 ORTHO05D008303 9.4e-119 431.4 509 49.5
unitig_748.g7253 Utricularia gibba HOM05D006104 ORTHO05D008303 2.3e-117 426.8 353 66.6
SalBow5G0256 Salvia bowleyana HOM05D006104 ORTHO05D008303 5.7e-116 422.2 394 60.2
FAN04G1807 Fragaria x ananassa HOM05D006104 ORTHO05D008303 7.7e-113 411.8 451 52.5
BNapus_Darmor_BZH_scaffold_99p00200 Brassica napus HOM05D006104 ORTHO05D008303 8.5e-112 408.3 261 78.5
Pp3c19_6070 Physcomitrium patens HOM05D006104 ORTHO05D008303 8.5e-112 408.3 370 57.0
SMO364G0667 Selaginella moellendorffii HOM05D006104 ORTHO05D008303 4.0e-109 399.4 420 54.3
vmacro20444 Vaccinium macrocarpon HOM05D006104 ORTHO05D008303 5.7e-108 395.6 426 56.6
EL10Ac4g08870 Beta vulgaris HOM05D006104 ORTHO05D008303 1.7e-107 394.0 241 80.1
Hma1.2p1_0085F.1_g043890 Hydrangea macrophylla HOM05D006104 ORTHO05D008303 9.1e-106 388.3 401 56.9
Mapoly0068s0059 Marchantia polymorpha HOM05D006104 ORTHO05D008303 3.5e-105 386.3 495 49.3
CSS0044834 Camellia sinensis var. sinensis HOM05D006104 ORTHO05D008303 1.4e-101 374.4 287 69.7
CBR_g22386 Chara braunii HOM05D006104 ORTHO05D008303 1.2e-97 361.3 400 52.8
MCO16G393 Micromonas commoda HOM05D006104 ORTHO05D008303 1.6e-97 360.9 359 56.8
CsaV3_5G024350 Cucumis sativus L. HOM05D006104 ORTHO05D008303 3.7e-91 339.7 268 66.4
Manes.01G125800 Manihot esculenta HOM05D006104 ORTHO05D008303 1.2e-89 334.7 310 62.6
Prupe.8G267800 Prunus persica HOM05D006104 ORTHO05D008303 1.0e-88 331.6 247 69.2
Sed0008277 Sechium edule HOM05D006104 ORTHO05D008303 1.7e-88 330.9 266 68.0
COL.COLO4_13439 Corchorus olitorius HOM05D006104 ORTHO05D008303 2.9e-88 330.1 235 74.0
Pp3c7_24690 Physcomitrium patens HOM05D006104 ORTHO05D008303 3.7e-83 313.2 341 47.8
SEGI_11411 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 1.2e-78 298.1 328 54.6
PRCOL_00000403 Prasinoderma coloniale HOM05D006104 ORTHO05D008303 2.8e-78 297.0 293 59.0
Cre12.g507950 Chlamydomonas reinhardtii HOM05D006104 ORTHO05D008303 1.8e-77 294.3 407 44.2
TPR.G37386 Trifolium pratense HOM05D006104 ORTHO05D008303 1.2e-76 291.6 200 76.0
Os10g0493900 Oryza sativa ssp. japonica HOM05D006104 ORTHO05D008303 6.8e-69 265.8 157 80.9
QL02p056562 Quercus lobata HOM05D006104 ORTHO05D008303 2.0e-68 264.2 157 80.9
SEGI_16808 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 2.4e-61 240.7 152 77.0
TPR.G14061 Trifolium pratense HOM05D006104 ORTHO05D008303 3.4e-60 236.9 224 61.6
arahy.Tifrunner.gnm1.ann1.4P08NV Arachis hypogaea HOM05D006104 ORTHO05D008303 1.2e-57 228.4 232 57.8
Psat5g144680 Pisum sativum HOM05D006104 ORTHO05D008303 2.4e-45 187.6 143 67.1
arahy.Tifrunner.gnm1.ann1.2Q0DPQ Arachis hypogaea HOM05D006104 ORTHO05D008303 5.7e-31 139.8 122 59.8
arahy.Tifrunner.gnm1.ann1.LG1UYC Arachis hypogaea HOM05D006104 ORTHO05D008303 1.1e-29 135.6 123 57.7
BraA02t04668Z Brassica rapa HOM05D006104 ORTHO05D008303 4.1e-29 133.7 136 55.9
Psat0s2701g0160 Pisum sativum HOM05D006104 ORTHO05D000113 2.3e-24 117.9 90 65.6
Psat5g144720 Pisum sativum HOM05D006104 ORTHO05D008303 3.9e-24 117.1 108 56.5
arahy.Tifrunner.gnm1.ann1.12AD17 Arachis hypogaea HOM05D000052 ORTHO05D000046 6.3e-22 109.8 92 64.1
Psat7g173760 Pisum sativum HOM05D006104 ORTHO05D008303 4.6e-17 93.6 69 68.1
Cpa.g.c43318 Carica papaya HOM05D006104 ORTHO05D117575 1.4e-16 92.0 255 29.0
Psat5g203840 Pisum sativum HOM05D006104 ORTHO05D324349 2.0e-15 88.2 159 48.4
Psat4g208480 Pisum sativum HOM05D006104 ORTHO05D008303 6.5e-11 73.2 35 97.1
Psat4g208520 Pisum sativum HOM05D006104 ORTHO05D008303 2.1e-09 68.2 57 64.9


User provided reference genes

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