Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002296g0050 Nicotiana tabacum HOM05D008139 ORTHO05D009872 3.1e-53 211.5 100 100.0
Nitab4.5_0000790g0110 Nicotiana tabacum HOM05D008139 ORTHO05D009872 3.4e-44 181.4 93 91.4
CAN.G1139.6 Capsicum annuum HOM05D008139 ORTHO05D009872 7.6e-28 127.1 98 68.4
PGSC0003DMG400045933 Solanum tuberosum HOM05D008139 ORTHO05D009872 2.9e-27 125.2 97 67.0
Solyc12g089070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 1.9e-26 122.5 98 66.3
Nitab4.5_0000110g0510 Nicotiana tabacum HOM05D008139 ORTHO05D009872 1.9e-18 95.9 78 56.4
Nitab4.5_0003246g0060 Nicotiana tabacum HOM05D008139 ORTHO05D009872 9.3e-18 93.6 83 53.0
Hma1.2p1_0249F.1_g102430 Hydrangea macrophylla HOM05D008139 ORTHO05D009872 1.0e-16 90.1 74 59.5
Solyc04g080070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 1.3e-16 89.7 68 58.8
Sopen04g033660 Solanum pennellii HOM05D008139 ORTHO05D009872 3.0e-16 88.6 80 51.2
PGSC0003DMG400005169 Solanum tuberosum HOM05D008139 ORTHO05D009872 3.0e-16 88.6 78 53.8
Dinv02745 Davidia involucrata HOM05D008139 ORTHO05D009872 3.9e-16 88.2 75 60.0
SGA_v2.0_scaffold374G50235 Striga asiatica HOM05D008139 ORTHO05D009872 1.9e-15 85.9 72 48.6
CAN.G1126.30 Capsicum annuum HOM05D008139 ORTHO05D009872 3.3e-15 85.1 80 51.2
CiPaw.04G117200 Carya illinoinensis HOM05D008139 ORTHO05D009872 5.6e-15 84.3 84 57.1
Ciclev10017826m.g Citrus clementina HOM05D008139 ORTHO05D009872 7.4e-15 84.0 78 59.0
DCAR_019772 Daucus carota HOM05D008139 ORTHO05D009872 1.3e-14 83.2 95 49.5
RcHm_v2.0_Chr2g0126901 Rosa chinensis HOM05D008139 ORTHO05D009872 1.3e-14 83.2 83 51.8
Lalb_Chr03g0028851 Lupinus albus HOM05D008139 ORTHO05D009872 1.6e-14 82.8 82 53.7
MD07G1098300 Malus domestica HOM05D008139 ORTHO05D009872 2.8e-14 82.0 76 57.9
Peaxi162Scf00057g00045 Petunia axillaris HOM05D008139 ORTHO05D009872 4.8e-14 81.3 67 56.7
QL08p033688 Quercus lobata HOM05D008139 ORTHO05D009872 6.2e-14 80.9 82 56.1
Cfa014432 Carpinus fangiana HOM05D008139 ORTHO05D009872 1.4e-13 79.7 72 58.3
Migut.C00700 Erythranthe guttata HOM05D008139 ORTHO05D009872 1.4e-13 79.7 66 56.1
SalBow8G2406 Salvia bowleyana HOM05D008139 ORTHO05D009872 1.8e-13 79.3 68 52.9
SalBow8G2479 Salvia bowleyana HOM05D008139 ORTHO05D009872 1.8e-13 79.3 68 52.9
Manes.13G103000 Manihot esculenta HOM05D008139 ORTHO05D009872 3.1e-13 78.6 77 54.5
Nn1g07030 Nelumbo nucifera HOM05D008139 ORTHO05D009872 3.1e-13 78.6 70 55.7
SGA_v2.0_scaffold48G18067 Striga asiatica HOM05D008139 ORTHO05D009872 4.0e-13 78.2 92 43.5
Migut.N00505 Erythranthe guttata HOM05D008139 ORTHO05D009872 5.3e-13 77.8 97 40.2
Potri.007G122500 Populus trichocarpa HOM05D008139 ORTHO05D009872 5.3e-13 77.8 79 53.2
Sabra17G0024400 Salix brachista HOM05D008139 ORTHO05D009872 5.3e-13 77.8 69 56.5
TWI36G0135 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 5.3e-13 77.8 80 52.5
Cc10_g03180 Coffea canephora HOM05D008139 ORTHO05D009872 6.9e-13 77.4 67 53.7
Rhsim06G0158900 Rhododendron simsii HOM05D008139 ORTHO05D009872 6.9e-13 77.4 66 57.6
Lsat_1_v5_gn_5_103860 Lactuca sativa HOM05D008139 ORTHO05D009872 1.2e-12 76.6 67 55.2
Lj3g0004995 Lotus japonicus HOM05D008139 ORTHO05D009872 1.2e-12 76.6 72 54.2
Thecc.04G120400 Theobroma cacao HOM05D008139 ORTHO05D009872 1.2e-12 76.6 68 55.9
CSS0007440 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 2.0e-12 75.9 67 56.7
TWI75G0563 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 2.0e-12 75.9 82 48.8
FAN02G4280 Fragaria x ananassa HOM05D008139 ORTHO05D009872 2.6e-12 75.5 74 52.7
Lsat_1_v5_gn_8_128280 Lactuca sativa HOM05D008139 ORTHO05D009872 2.6e-12 75.5 67 53.7
Prupe.3G131300 Prunus persica HOM05D008139 ORTHO05D009872 2.6e-12 75.5 74 51.4
Potri.017G037500 Populus trichocarpa HOM05D008139 ORTHO05D009872 3.4e-12 75.1 68 55.9
COL.COLO4_15724 Corchorus olitorius HOM05D008139 ORTHO05D009872 5.8e-12 74.3 71 46.5
CSS0007820 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 7.6e-12 73.9 78 52.6
Duzib133G0708 Durio zibethinus HOM05D008139 ORTHO05D009872 7.6e-12 73.9 70 51.4
Phvul.011G105800 Phaseolus vulgaris HOM05D008139 ORTHO05D009872 1.7e-11 72.8 72 48.6
Medtr4g046720 Medicago truncatula HOM05D008139 ORTHO05D009872 3.8e-11 71.6 72 52.8
Prupe.2G122300 Prunus persica HOM05D008139 ORTHO05D009872 1.4e-10 69.7 76 51.3
Glyma.12G100900 Glycine max HOM05D008139 ORTHO05D009872 3.2e-10 68.6 72 48.6
PGR083G1842 Punica granatum HOM05D008139 ORTHO05D009872 3.2e-10 68.6 72 50.0
Gohir.D11G168166 Gossypium hirsutum HOM05D008139 ORTHO05D009872 5.5e-10 67.8 69 46.4
Gorai.007G179600 Gossypium raimondii HOM05D008139 ORTHO05D009872 5.5e-10 67.8 69 46.4
Eucgr.A01721 Eucalyptus grandis HOM05D008139 ORTHO05D009872 1.2e-09 66.6 70 51.4
TPR.G19049 Trifolium pratense HOM05D008139 ORTHO05D009872 1.2e-09 66.6 72 51.4
Sed0019249 Sechium edule HOM05D008139 ORTHO05D009872 1.6e-09 66.2 84 42.9
ClCG02G001810 Citrullus lanatus HOM05D008139 ORTHO05D009872 2.1e-09 65.9 82 41.5
Atru.chr6.3155 Acer truncatum HOM05D008139 ORTHO05D009872 4.6e-09 64.7 71 46.5
CsaV3_7G003730 Cucumis sativus L. HOM05D008139 ORTHO05D009872 6.0e-09 64.3 92 39.1
TAR626G0589 Trochodendron aralioides HOM05D008139 ORTHO05D009872 6.0e-09 64.3 76 42.1
Gohir.A11G161900 Gossypium hirsutum HOM05D008139 ORTHO05D009872 7.9e-09 63.9 69 44.9
TAR626G0598 Trochodendron aralioides HOM05D008139 ORTHO05D009872 1.0e-08 63.5 76 43.4
Atru.chr6.3157 Acer truncatum HOM05D008139 ORTHO05D009872 1.8e-08 62.8 71 46.5
unitig_46.g17928 Utricularia gibba HOM05D008139 ORTHO05D009872 3.0e-08 62.0 104 37.5
Aqoxy4G01991 Aquilegia oxysepala HOM05D008139 ORTHO05D009872 3.9e-08 61.6 76 42.1
THA.LOC104816105 Tarenaya hassleriana HOM05D011011 ORTHO05D009872 8.7e-08 60.5 70 47.1
MELO3C018806.2 Cucumis melo HOM05D008139 ORTHO05D009872 2.5e-07 58.9 90 37.8
BcaB01g03981 Brassica carinata HOM05D011011 ORTHO05D009872 1.6e-06 56.2 91 35.2
Sp4g14730 Schrenkiella parvula HOM05D011011 ORTHO05D009872 2.1e-06 55.8 87 36.8
CARHR126180 Cardamine hirsuta HOM05D011011 ORTHO05D009872 2.8e-06 55.5 72 40.3
C04p61740 Brassica napus HOM05D011011 ORTHO05D009872 3.7e-06 55.1 90 35.6
BcaB01g03982 Brassica carinata HOM05D011011 ORTHO05D009872 4.8e-06 54.7 91 35.2
BcaC01g05908 Brassica carinata HOM05D011011 ORTHO05D009872 4.8e-06 54.7 91 35.2
C03p21180 Brassica napus HOM05D011011 ORTHO05D009872 4.8e-06 54.7 91 35.2
AL4G27740 Arabidopsis lyrata HOM05D011011 ORTHO05D009872 6.2e-06 54.3 75 41.3
BcaC02g07938 Brassica carinata HOM05D011011 ORTHO05D009872 6.2e-06 54.3 90 34.4
A03p18150 Brassica napus HOM05D011011 ORTHO05D009872 6.2e-06 54.3 88 36.4
BolC4t27657H Brassica oleracea HOM05D011011 ORTHO05D009872 6.2e-06 54.3 90 34.4
BraA03t11075Z Brassica rapa HOM05D011011 ORTHO05D009872 6.2e-06 54.3 88 36.4


User provided reference genes

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