Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 6.0e-89 330.9 174 100.0
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 1.4e-50 203.4 178 61.8
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 1.4e-50 203.4 178 61.8
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 2.7e-49 199.1 181 61.3
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 1.0e-48 197.2 170 67.6
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 2.2e-46 189.5 177 58.2
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 3.8e-43 178.7 177 58.8
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 4.4e-39 165.2 157 59.2
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 4.2e-34 148.7 153 56.9
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 8.8e-32 141.0 150 51.3
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 6.3e-30 134.8 122 59.8
Nitab4.5_0000019g0110 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.7e-28 129.4 104 70.2
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 2.5e-26 122.9 113 56.6
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 4.7e-25 118.6 178 43.3
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 4.7e-25 118.6 178 43.3
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 2.3e-24 116.3 154 48.1
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 4.4e-23 112.1 166 45.2
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 1.7e-22 110.2 150 48.0
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 2.2e-22 109.8 154 46.8
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 1.1e-21 107.5 163 42.3
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 1.1e-21 107.5 191 40.3
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.4e-21 107.1 172 40.1
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.4e-21 107.1 175 40.0
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 1.8e-21 106.7 175 39.4
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 2.4e-21 106.3 164 42.1
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 2.4e-21 106.3 163 42.9
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 3.1e-21 105.9 155 47.1
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 9.2e-21 104.4 178 42.7
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 1.2e-20 104.0 163 41.7
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 1.2e-20 104.0 150 45.3
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 1.2e-20 104.0 158 41.8
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 1.2e-20 104.0 133 47.4
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.2e-20 104.0 155 44.5
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 1.6e-20 103.6 175 42.3
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 2.7e-20 102.8 141 45.4
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 3.5e-20 102.4 178 40.4
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 5.9e-20 101.7 150 44.0
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 7.8e-20 101.3 157 44.6
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 7.8e-20 101.3 167 44.9
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 1.0e-19 100.9 168 42.3
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 1.0e-19 100.9 180 40.0
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.7e-19 100.1 196 36.2
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 1.7e-19 100.1 155 42.6
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 1.7e-19 100.1 155 44.5
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 1.7e-19 100.1 167 41.9
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 2.3e-19 99.8 160 43.1
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 2.9e-19 99.4 166 42.8
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 2.9e-19 99.4 161 42.2
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 5.0e-19 98.6 148 43.9
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 6.6e-19 98.2 182 39.6
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 6.6e-19 98.2 182 39.6
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 6.6e-19 98.2 170 40.6
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 8.6e-19 97.8 175 40.0
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 8.6e-19 97.8 154 42.9
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 1.1e-18 97.4 175 39.4
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.1e-18 97.4 170 39.4
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 1.1e-18 97.4 171 39.8
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 1.5e-18 97.1 148 43.2
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 1.9e-18 96.7 158 41.1
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 5.6e-18 95.1 148 43.2
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 7.3e-18 94.7 172 38.4
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 7.3e-18 94.7 165 41.2
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.2e-17 94.0 168 38.1
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 1.2e-17 94.0 158 41.8
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 1.2e-17 94.0 172 40.1
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 2.8e-17 92.8 136 44.1
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 3.6e-17 92.4 160 41.9
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 4.7e-17 92.0 162 37.7
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.0e-16 90.9 171 38.6
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 1.0e-16 90.9 171 38.0
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 1.4e-16 90.5 141 44.0
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 1.8e-16 90.1 153 39.2
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 2.3e-16 89.7 154 37.0
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 2.3e-16 89.7 172 38.4
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 4.0e-16 89.0 150 40.7
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 4.0e-16 89.0 159 41.5
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 5.2e-16 88.6 149 40.9
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 8.9e-16 87.8 162 36.4
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 8.9e-16 87.8 172 40.1
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 8.9e-16 87.8 145 40.0
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 1.2e-15 87.4 156 38.5
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 1.2e-15 87.4 154 36.4
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 1.2e-15 87.4 173 41.6
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 1.5e-15 87.0 142 43.7
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 1.5e-15 87.0 151 39.7
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 2.0e-15 86.7 149 37.6
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 2.0e-15 86.7 154 37.0
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 2.0e-15 86.7 154 36.4
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 2.0e-15 86.7 154 36.4
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 2.0e-15 86.7 149 37.6
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 3.4e-15 85.9 149 37.6
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 3.4e-15 85.9 149 37.6
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 5.8e-15 85.1 149 37.6
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 5.8e-15 85.1 171 36.8
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 9.8e-15 84.3 159 38.4
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 1.7e-14 83.6 171 38.0
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 2.2e-14 83.2 149 39.6
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 2.2e-14 83.2 150 37.3
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 2.2e-14 83.2 183 35.5
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 2.9e-14 82.8 147 38.1
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 3.7e-14 82.4 153 35.9
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 6.4e-14 81.6 158 39.9
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 1.4e-13 80.5 153 38.6
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 1.2e-12 77.4 148 37.2
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 2.0e-12 76.6 145 40.0
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 2.0e-12 76.6 145 40.0
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 3.5e-12 75.9 109 43.1
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 6.6e-11 71.6 153 35.9
Oeu036758.1 Olea europaea HOM05D006473 ORTHO05D008108 1.5e-10 70.5 132 37.9
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 4.3e-10 68.9 50 66.0
Dinv40839 Davidia involucrata HOM05D006473 ORTHO05D008108 4.3e-10 68.9 75 54.7
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 5.6e-10 68.6 117 39.3
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 9.5e-10 67.8 48 62.5
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 9.5e-10 67.8 153 35.9
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 2.1e-09 66.6 149 36.2
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 2.1e-09 66.6 170 35.9
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 1.8e-08 63.5 51 58.8
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 5.2e-08 62.0 66 50.0
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 5.2e-08 62.0 66 50.0
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 3.4e-07 59.3 145 33.1


User provided reference genes

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