Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002289g0090 Nicotiana tabacum HOM05D007712 ORTHO05D009755 1.1e-45 186.4 100 100.0
PGSC0003DMG402004821 Solanum tuberosum HOM05D007712 ORTHO05D009755 6.4e-19 97.4 53 96.2
Solyc08g078480.3 Solanum lycopersicum HOM05D007712 ORTHO05D009755 1.2e-17 93.2 51 94.1
Nitab4.5_0001381g0130 Nicotiana tabacum HOM05D007712 ORTHO05D009755 1.6e-17 92.8 49 98.0
CAN.G1178.28 Capsicum annuum HOM05D007712 ORTHO05D009755 8.7e-16 87.0 49 93.9
Gohir.D12G218700 Gossypium hirsutum HOM05D007712 ORTHO05D009755 7.4e-15 84.0 50 82.0
Gorai.008G234300 Gossypium raimondii HOM05D007712 ORTHO05D009755 7.4e-15 84.0 50 82.0
Prupe.5G067000 Prunus persica HOM05D007712 ORTHO05D009755 3.7e-14 81.6 49 79.6
CSS0007152 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 4.8e-14 81.3 49 79.6
COL.COLO4_37150 Corchorus olitorius HOM05D007712 ORTHO05D009755 4.8e-14 81.3 48 83.3
Thecc.03G249200 Theobroma cacao HOM05D007712 ORTHO05D009755 6.2e-14 80.9 49 77.6
Cpa.g.sc29.177 Carica papaya HOM05D007712 ORTHO05D009755 8.1e-14 80.5 52 78.8
Lsat_1_v5_gn_6_18000 Lactuca sativa HOM05D007712 ORTHO05D009755 8.1e-14 80.5 49 79.6
MD06G1056600 Malus domestica HOM05D007712 ORTHO05D009755 8.1e-14 80.5 49 77.6
Manes.02G041000 Manihot esculenta HOM05D007712 ORTHO05D009755 8.1e-14 80.5 49 77.6
Psat4g072600 Pisum sativum HOM05D007712 ORTHO05D009755 8.1e-14 80.5 54 77.8
Gohir.A12G216100 Gossypium hirsutum HOM05D007712 ORTHO05D009755 1.1e-13 80.1 48 81.2
Medtr4g100770 Medicago truncatula HOM05D007712 ORTHO05D009755 1.1e-13 80.1 54 77.8
HanXRQChr16g0510951 Helianthus annuus HOM05D007712 ORTHO05D009755 1.4e-13 79.7 49 79.6
Hma1.2p1_0316F.1_g122970 Hydrangea macrophylla HOM05D007712 ORTHO05D009755 1.4e-13 79.7 47 80.9
VMungo0251G2826 Vigna mungo HOM05D007712 ORTHO05D009755 1.4e-13 79.7 53 77.4
AL7G38040 Arabidopsis lyrata HOM05D007712 ORTHO05D009755 1.8e-13 79.3 50 80.0
CARHR223220 Cardamine hirsuta HOM05D007712 ORTHO05D009755 1.8e-13 79.3 50 80.0
Lj4g0003995 Lotus japonicus HOM05D007712 ORTHO05D009755 1.8e-13 79.3 49 79.6
Sp7g15330 Schrenkiella parvula HOM05D007712 ORTHO05D009755 1.8e-13 79.3 50 80.0
CSS0012443 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 2.4e-13 79.0 47 80.9
Glyma.05G061200 Glycine max HOM05D007712 ORTHO05D009755 2.4e-13 79.0 52 78.8
Glyma.17G143000 Glycine max HOM05D007712 ORTHO05D009755 2.4e-13 79.0 52 78.8
Duzib205G0100 Durio zibethinus HOM05D007712 ORTHO05D009755 3.1e-13 78.6 48 77.1
MD04G1062500 Malus domestica HOM05D007712 ORTHO05D009755 3.1e-13 78.6 49 75.5
TWI60G0592 Tripterygium wilfordii HOM05D007712 ORTHO05D009755 3.1e-13 78.6 54 72.2
AT4G16695 Arabidopsis thaliana HOM05D007712 ORTHO05D009755 4.0e-13 78.2 50 78.0
Ca_21974_v3 Cicer arietinum L. HOM05D007712 ORTHO05D009755 4.0e-13 78.2 52 76.9
Ciclev10023737m.g Citrus clementina HOM05D007712 ORTHO05D009755 4.0e-13 78.2 47 78.7
PGR031G2779 Punica granatum HOM05D007712 ORTHO05D009755 4.0e-13 78.2 47 78.7
DCAR_006839 Daucus carota HOM05D007712 ORTHO05D009755 5.3e-13 77.8 52 76.9
DCAR_008500 Daucus carota HOM05D007712 ORTHO05D009755 6.9e-13 77.4 52 75.0
PSO063G7306 Papaver somniferum HOM05D007712 ORTHO05D009755 9.0e-13 77.0 56 66.1
Aa31LG2G12880 Aethionema arabicum HOM05D007712 ORTHO05D009755 1.2e-12 76.6 48 79.2
BcaNung00160 Brassica carinata HOM05D007712 ORTHO05D009755 1.2e-12 76.6 48 79.2
Haze_07896 Corylus avellana HOM05D007712 ORTHO05D009755 1.2e-12 76.6 47 76.6
Duzib068G1393 Durio zibethinus HOM05D007712 ORTHO05D009755 1.2e-12 76.6 52 75.0
Phvul.003G221800 Phaseolus vulgaris HOM05D007712 ORTHO05D009755 1.2e-12 76.6 52 76.9
RcHm_v2.0_Chr7g0203631 Rosa chinensis HOM05D007712 ORTHO05D009755 1.2e-12 76.6 54 74.1
HanXRQChr11g0345641 Helianthus annuus HOM05D007712 ORTHO05D009755 1.5e-12 76.3 47 78.7
CANSAT21G0844 Cannabis sativa HOM05D007712 ORTHO05D009755 2.0e-12 75.9 49 73.5
CiPaw.11G080700 Carya illinoinensis HOM05D007712 ORTHO05D009755 2.0e-12 75.9 49 75.5
Nn1g00955 Nelumbo nucifera HOM05D007712 ORTHO05D009755 2.0e-12 75.9 54 72.2
A01p20590 Brassica napus HOM05D007712 ORTHO05D009755 2.6e-12 75.5 48 79.2
C01p25890 Brassica napus HOM05D007712 ORTHO05D009755 2.6e-12 75.5 48 79.2
BraA01t01987Z Brassica rapa HOM05D007712 ORTHO05D009755 2.6e-12 75.5 48 79.2
Carub.0007s2470 Capsella rubella HOM05D007712 ORTHO05D009755 2.6e-12 75.5 48 79.2
HanXRQChr13g0400821 Helianthus annuus HOM05D007712 ORTHO05D009755 2.6e-12 75.5 47 78.7
ClCG01G004140 Citrullus lanatus HOM05D007712 ORTHO05D009755 3.4e-12 75.1 56 66.1
Potri.003G078100 Populus trichocarpa HOM05D007712 ORTHO05D009755 3.4e-12 75.1 47 78.7
ATR0317G046 Amborella trichopoda HOM05D007712 ORTHO05D009755 4.5e-12 74.7 52 71.2
Nn6g33914 Nelumbo nucifera HOM05D007712 ORTHO05D009755 4.5e-12 74.7 56 67.9
EL10Ac5g12378 Beta vulgaris HOM05D007712 ORTHO05D009755 5.8e-12 74.3 47 76.6
Manes.01G082000 Manihot esculenta HOM05D007712 ORTHO05D009755 5.8e-12 74.3 47 74.5
PSO782G1928 Papaver somniferum HOM05D007712 ORTHO05D009755 1.3e-11 73.2 52 69.2
BolC1t02534H Brassica oleracea HOM05D007712 ORTHO05D009755 2.2e-11 72.4 46 78.3
TAR629G1768 Trochodendron aralioides HOM05D007712 ORTHO05D009755 2.2e-11 72.4 56 64.3
Sed0021045 Sechium edule HOM05D007712 ORTHO05D009755 4.9e-11 71.2 49 79.6
BcaC06g33508 Brassica carinata HOM05D007712 ORTHO05D009755 8.4e-11 70.5 44 79.5
C07p48200 Brassica napus HOM05D007712 ORTHO05D009755 8.4e-11 70.5 44 79.5
BolC7t45343H Brassica oleracea HOM05D007712 ORTHO05D009755 8.4e-11 70.5 44 79.5
Migut.A01117 Erythranthe guttata HOM05D007712 ORTHO05D009755 8.4e-11 70.5 52 71.2
Potri.001G156500 Populus trichocarpa HOM05D007712 ORTHO05D009755 8.4e-11 70.5 48 75.0
MELO3C005524.2 Cucumis melo HOM05D007712 ORTHO05D009755 1.1e-10 70.1 49 73.5
Eucgr.E00411 Eucalyptus grandis HOM05D007712 ORTHO05D009755 1.1e-10 70.1 55 65.5
THA.LOC104815500 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 1.1e-10 70.1 48 75.0
Lalb_Chr16g0386781 Lupinus albus HOM05D007712 ORTHO05D009755 1.4e-10 69.7 49 75.5
CiPaw.12G051200 Carya illinoinensis HOM05D007712 ORTHO05D009755 2.5e-10 68.9 50 74.0
BraA08t33255Z Brassica rapa HOM05D007712 ORTHO05D009755 7.1e-10 67.4 45 77.8
Duzib268G1849 Durio zibethinus HOM05D007712 ORTHO05D009755 7.1e-10 67.4 50 62.0
vmacro00192 Vaccinium macrocarpon HOM05D007712 ORTHO05D009755 7.1e-10 67.4 49 67.3
Lalb_Chr05g0221211 Lupinus albus HOM05D007712 ORTHO05D009755 1.2e-09 66.6 49 71.4
Mapoly0033s0142 Marchantia polymorpha HOM05D007712 ORTHO05D009755 2.1e-09 65.9 47 66.0
Pp3c5_22940 Physcomitrium patens HOM05D007712 ORTHO05D009755 2.7e-09 65.5 48 64.6
HPP92_021033 Vanilla planifolia HOM05D007712 ORTHO05D009755 2.7e-09 65.5 47 70.2
HPP92_027434 Vanilla planifolia HOM05D007712 ORTHO05D009755 2.7e-09 65.5 47 70.2
unitig_744.g24472 Utricularia gibba HOM05D007712 ORTHO05D009755 6.0e-09 64.3 47 68.1
SHI02516 Sapria himalayana HOM05D007712 ORTHO05D009755 1.8e-08 62.8 46 69.6
Os03g0102000 Oryza sativa ssp. japonica HOM05D007712 ORTHO05D009755 7.4e-07 57.4 57 56.1
CBR_g755 Chara braunii HOM05D007712 ORTHO05D009755 9.6e-07 57.0 49 57.1
FAN08G0196 Fragaria x ananassa HOM05D007712 ORTHO05D009755 1.3e-06 56.6 41 70.7
THA.LOC104815513 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 2.8e-06 55.5 34 82.4
A03p50120 Brassica napus HOM05D007712 ORTHO05D009755 3.7e-06 55.1 49 61.2


User provided reference genes

Program Settings