Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.5e-26 122.1 62 100.0
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 6.4e-17 90.1 92 57.6
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 2.4e-16 88.2 90 57.8
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 5.4e-16 87.0 90 55.6
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 5.4e-16 87.0 90 55.6
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 7.0e-16 86.7 91 54.9
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 9.2e-16 86.3 90 56.7
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 9.2e-16 86.3 90 53.3
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 9.2e-16 86.3 90 55.6
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 1.6e-15 85.5 90 54.4
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.0e-15 85.1 90 54.4
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 2.7e-15 84.7 90 53.3
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 3.5e-15 84.3 89 55.1
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 6.0e-15 83.6 88 56.8
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 7.8e-15 83.2 90 53.3
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 7.8e-15 83.2 88 55.7
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 7.8e-15 83.2 90 54.4
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 1.0e-14 82.8 90 54.4
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 1.0e-14 82.8 90 52.2
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 1.0e-14 82.8 91 52.7
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 1.0e-14 82.8 90 52.2
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 1.0e-14 82.8 90 52.2
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 1.3e-14 82.4 90 54.4
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 1.3e-14 82.4 91 50.5
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.3e-14 82.4 91 50.5
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.3e-14 82.4 91 50.5
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 1.3e-14 82.4 90 54.4
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 1.7e-14 82.0 88 53.4
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 1.7e-14 82.0 88 55.7
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 1.7e-14 82.0 89 53.9
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 3.9e-14 80.9 90 51.1
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 5.0e-14 80.5 85 55.3
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 8.6e-14 79.7 91 50.5
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 8.6e-14 79.7 88 52.3
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 8.6e-14 79.7 88 52.3
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 8.6e-14 79.7 90 51.1
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 8.6e-14 79.7 88 53.4
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 1.5e-13 79.0 90 52.2
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 1.9e-13 78.6 89 51.7
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 1.9e-13 78.6 91 49.5
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 1.9e-13 78.6 86 52.3
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 2.5e-13 78.2 88 53.4
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 2.5e-13 78.2 88 53.4
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 2.5e-13 78.2 88 51.1
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 2.5e-13 78.2 89 52.8
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 2.5e-13 78.2 91 50.5
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 2.5e-13 78.2 90 50.0
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 3.3e-13 77.8 88 51.1
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 3.3e-13 77.8 88 52.3
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 3.3e-13 77.8 88 52.3
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 4.3e-13 77.4 90 50.0
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 4.3e-13 77.4 90 51.1
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 4.3e-13 77.4 90 52.2
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 7.3e-13 76.6 88 52.3
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 2.1e-12 75.1 90 48.9
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 2.1e-12 75.1 88 50.0
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 2.8e-12 74.7 88 50.0
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 3.6e-12 74.3 88 48.9
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 4.7e-12 73.9 102 45.1
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 4.7e-12 73.9 88 51.1
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 4.7e-12 73.9 89 48.3
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 6.2e-12 73.6 88 51.1
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 8.1e-12 73.2 84 52.4
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 8.1e-12 73.2 82 52.4
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 1.1e-11 72.8 86 48.8
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.1e-11 72.8 88 48.9
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 2.3e-11 71.6 86 50.0
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 5.2e-11 70.5 86 50.0
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 8.9e-11 69.7 126 38.1
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 8.9e-11 69.7 85 49.4
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 1.2e-10 69.3 86 47.7
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 1.5e-10 68.9 86 47.7
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 1.5e-10 68.9 86 47.7
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 2.0e-10 68.6 86 47.7
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 2.0e-10 68.6 103 41.7
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 3.4e-10 67.8 86 46.5
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 3.4e-10 67.8 86 46.5
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 3.4e-10 67.8 86 46.5
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 3.4e-10 67.8 86 46.5
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 3.4e-10 67.8 86 46.5
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 5.8e-10 67.0 86 46.5
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 7.5e-10 66.6 86 46.5
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 7.5e-10 66.6 37 83.8
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 1.3e-09 65.9 37 86.5
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 1.7e-09 65.5 86 45.3
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 2.2e-09 65.1 36 86.1
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 2.9e-09 64.7 37 86.5
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 4.9e-09 63.9 37 83.8
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 8.3e-09 63.2 37 81.1
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 5.4e-08 60.5 36 83.3
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 1.2e-07 59.3 36 80.6
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 2.7e-07 58.2 69 52.2
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 6.0e-07 57.0 75 45.3


User provided reference genes

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