Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002286g0070 Nicotiana tabacum HOM05D000157 ORTHO05D001775 6.4e-73 277.3 142 100.0
Nitab4.5_0006359g0030 Nicotiana tabacum HOM05D000157 ORTHO05D001775 2.8e-60 235.3 136 91.9
Peaxi162Scf00088g00063 Petunia axillaris HOM05D000157 ORTHO05D001775 5.5e-40 167.9 139 71.2
Solyc07g007440.1 Solanum lycopersicum HOM05D000157 ORTHO05D001775 4.1e-35 151.8 134 64.9
Sopen07g003490 Solanum pennellii HOM05D000157 ORTHO05D001775 2.9e-33 145.6 134 61.9
PGSC0003DMG400030722 Solanum tuberosum HOM05D000157 ORTHO05D001775 1.2e-31 140.2 134 61.9
Cc06_g12920 Coffea canephora HOM05D000086 ORTHO05D001775 7.0e-19 97.8 136 47.8
Eucgr.C02205 Eucalyptus grandis HOM05D000086 ORTHO05D001775 6.8e-14 81.3 112 45.5
FAN17G1724 Fragaria x ananassa HOM05D000086 ORTHO05D001775 8.9e-14 80.9 150 36.7
Oeu052799.2 Olea europaea HOM05D000157 ORTHO05D001775 8.9e-14 80.9 135 42.2
Medtr3g100400 Medicago truncatula HOM05D000086 ORTHO05D001775 1.2e-13 80.5 113 47.8
Nn8g40415 Nelumbo nucifera HOM05D000086 ORTHO05D001775 1.2e-13 80.5 155 41.9
FAN07G1166 Fragaria x ananassa HOM05D000086 ORTHO05D001775 2.6e-13 79.3 150 36.7
FAN12G4282 Fragaria x ananassa HOM05D000086 ORTHO05D001775 7.5e-13 77.8 150 36.0
RcHm_v2.0_Chr4g0398561 Rosa chinensis HOM05D000086 ORTHO05D001775 7.5e-13 77.8 137 40.9
FvH4_4g06660 Fragaria vesca HOM05D000086 ORTHO05D001775 1.3e-12 77.0 150 36.0
Lj1g0016054 Lotus japonicus HOM05D000086 ORTHO05D001775 1.7e-12 76.6 117 45.3
Hma1.2p1_0235F.1_g098990 Hydrangea macrophylla HOM05D000157 ORTHO05D001775 8.3e-12 74.3 148 39.2
Lj5P611T26 Lonicera japonica HOM05D000086 ORTHO05D001775 7.0e-11 71.2 150 39.3
vmacro07833 Vaccinium macrocarpon HOM05D000086 ORTHO05D001775 9.2e-11 70.9 133 41.4
Haze_22080 Corylus avellana HOM05D000157 ORTHO05D001775 2.7e-10 69.3 138 37.7
Prupe.1G069300 Prunus persica HOM05D000086 ORTHO05D001775 2.7e-10 69.3 135 38.5
Sabra15G0081800 Salix brachista HOM05D000086 ORTHO05D001775 3.5e-10 68.9 146 39.7
GSVIVG01029257001 Vitis vinifera HOM05D000157 ORTHO05D001775 3.5e-10 68.9 112 42.9
Lj5P613T17 Lonicera japonica HOM05D000086 ORTHO05D001775 4.5e-10 68.6 130 41.5
Psat5g046840 Pisum sativum HOM05D000086 ORTHO05D001775 5.9e-10 68.2 136 36.8
Lsat_1_v5_gn_8_68260 Lactuca sativa HOM05D000086 ORTHO05D001775 7.8e-10 67.8 145 36.6
Atru.chr7.990 Acer truncatum HOM05D000086 ORTHO05D001775 1.0e-09 67.4 154 37.7
Cfa013492 Carpinus fangiana HOM05D000157 ORTHO05D001775 1.0e-09 67.4 140 39.3
Sc08g0009300 Simmondsia chinensis HOM05D000086 ORTHO05D001775 1.0e-09 67.4 107 39.3
VMungo1309G1408 Vigna mungo HOM05D000086 ORTHO05D001775 1.0e-09 67.4 126 39.7
Aqoxy5G02343 Aquilegia oxysepala HOM05D000157 ORTHO05D001775 1.7e-09 66.6 121 40.5
Os06g0695900 Oryza sativa ssp. japonica HOM05D000086 ORTHO05D001775 1.7e-09 66.6 117 39.3
TAR383G0244 Trochodendron aralioides HOM05D000157 ORTHO05D001775 1.7e-09 66.6 154 35.7
Manes.14G063700 Manihot esculenta HOM05D000157 ORTHO05D001775 2.9e-09 65.9 163 36.2
TWI36G1233 Tripterygium wilfordii HOM05D000157 ORTHO05D001775 2.9e-09 65.9 138 39.1
Ah.09g230200 Amaranthus hybridus HOM05D000157 ORTHO05D001775 5.0e-09 65.1 85 49.4
Ciclev10010271m.g Citrus clementina HOM05D000157 ORTHO05D001775 8.6e-09 64.3 121 36.4
Phvul.009G144600 Phaseolus vulgaris HOM05D000086 ORTHO05D001775 1.5e-08 63.5 147 37.4
AUR62021327 Chenopodium quinoa HOM05D000086 ORTHO05D001775 1.9e-08 63.2 118 39.0
CiPaw.07G201000 Carya illinoinensis HOM05D000086 ORTHO05D001775 3.3e-08 62.4 141 38.3
Duzib168G2187 Durio zibethinus HOM05D000086 ORTHO05D001775 3.3e-08 62.4 110 40.9
Dinv41209 Davidia involucrata HOM05D000068 ORTHO05D007185 4.3e-08 62.0 123 37.4
Cpa.g.sc19.226 Carica papaya HOM05D000086 ORTHO05D001775 5.6e-08 61.6 165 33.9
AUR62033243 Chenopodium quinoa HOM05D000157 ORTHO05D001775 5.6e-08 61.6 115 39.1
TPR.G6364 Trifolium pratense HOM05D000086 ORTHO05D001775 5.6e-08 61.6 115 41.7
Oeu009080.2 Olea europaea HOM05D000086 ORTHO05D001775 7.3e-08 61.2 150 36.7
AT5G05810 Arabidopsis thaliana HOM05D000086 ORTHO05D001775 9.5e-08 60.8 82 45.1
MSTRG.6245 Avicennia marina HOM05D000157 ORTHO05D001775 9.5e-08 60.8 136 38.2
Ca_15999_v3 Cicer arietinum L. HOM05D000086 ORTHO05D001775 9.5e-08 60.8 113 40.7
MBI16_g29050_MAGBIO Magnolia biondii HOM05D000157 ORTHO05D001775 9.5e-08 60.8 111 37.8
EL10Ac8g18311 Beta vulgaris HOM05D000157 ORTHO05D001775 1.2e-07 60.5 65 52.3
Potri.015G056800 Populus trichocarpa HOM05D000086 ORTHO05D001775 1.2e-07 60.5 149 36.2
Sed0002465 Sechium edule HOM05D000086 ORTHO05D001775 1.2e-07 60.5 100 41.0
AL6G15710 Arabidopsis lyrata HOM05D000086 ORTHO05D001775 1.6e-07 60.1 82 43.9
Actinidia39214 Actinidia chinensis HOM05D000157 ORTHO05D001775 2.8e-07 59.3 140 39.3
Carub.0006s0471 Capsella rubella HOM05D000086 ORTHO05D001775 3.6e-07 58.9 82 43.9
Gohir.D13G212200 Gossypium hirsutum HOM05D000157 ORTHO05D001775 3.6e-07 58.9 71 46.5
Gorai.013G242500 Gossypium raimondii HOM05D000157 ORTHO05D001775 3.6e-07 58.9 71 46.5
MSTRG.19724 Avicennia marina HOM05D000157 ORTHO05D001775 4.7e-07 58.5 154 37.0
Rhsim03G0027500 Rhododendron simsii HOM05D000086 ORTHO05D001775 4.7e-07 58.5 63 55.6
Actinidia09315 Actinidia chinensis HOM05D000157 ORTHO05D001775 8.0e-07 57.8 124 37.1
Gohir.A13G207700 Gossypium hirsutum HOM05D000157 ORTHO05D001775 8.0e-07 57.8 71 45.1
Sp6g37090 Schrenkiella parvula HOM05D000086 ORTHO05D001775 8.0e-07 57.8 84 42.9
Zm00001eb226440 Zea mays HOM05D000086 ORTHO05D001775 8.0e-07 57.8 117 35.9
ClCG06G013930 Citrullus lanatus HOM05D000157 ORTHO05D007185 2.3e-06 56.2 79 48.1
Thhalv10013693m.g Eutrema salsugineum HOM05D000086 ORTHO05D001775 3.0e-06 55.8 82 41.5
PGR044G0089 Punica granatum HOM05D000086 ORTHO05D001775 3.0e-06 55.8 142 33.8
QL11p009870 Quercus lobata HOM05D000086 ORTHO05D001775 3.0e-06 55.8 157 32.5
CDE05G2386 Ceratophyllum demersum HOM05D000086 ORTHO05D001775 4.0e-06 55.5 127 37.0
COL.COLO4_23449 Corchorus olitorius HOM05D000157 ORTHO05D001775 4.0e-06 55.5 172 32.0
BcaC06g32289 Brassica carinata HOM05D000086 ORTHO05D001775 5.2e-06 55.1 114 36.8
CsaV3_1G032130 Cucumis sativus L. HOM05D000086 ORTHO05D001775 5.2e-06 55.1 100 40.0
Aa31LG11G6820 Aethionema arabicum HOM05D000086 ORTHO05D001775 8.9e-06 54.3 83 45.8
A10p30560 Brassica napus HOM05D000086 ORTHO05D001775 8.9e-06 54.3 112 37.5


User provided reference genes

Program Settings