Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002284g0060 Nicotiana tabacum HOM05D005269 ORTHO05D006429 1.4e-38 162.5 84 100.0
Nitab4.5_0011997g0010 Nicotiana tabacum HOM05D005269 ORTHO05D006429 2.6e-37 158.3 84 97.6
PGSC0003DMG400029616 Solanum tuberosum HOM05D005269 ORTHO05D006429 2.2e-20 102.1 127 52.0
Solyc09g091450.3 Solanum lycopersicum HOM05D005269 ORTHO05D006429 1.9e-19 99.0 127 51.2
Sopen09g034380 Solanum pennellii HOM05D005269 ORTHO05D006429 5.4e-19 97.4 127 50.4
Peaxi162Scf00047g01229 Petunia axillaris HOM05D005269 ORTHO05D006429 1.9e-16 89.0 126 46.8
Nitab4.5_0001066g0040 Nicotiana tabacum HOM05D005269 ORTHO05D006429 1.6e-15 85.9 131 47.3
Nitab4.5_0001769g0050 Nicotiana tabacum HOM05D005269 ORTHO05D006429 1.6e-15 85.9 129 47.3
PGSC0003DMG400019109 Solanum tuberosum HOM05D005269 ORTHO05D006429 3.6e-15 84.7 134 44.8
Solyc05g053520.3 Solanum lycopersicum HOM05D005269 ORTHO05D006429 4.7e-15 84.3 132 46.2
Sopen05g032040 Solanum pennellii HOM05D005269 ORTHO05D006429 6.2e-15 84.0 132 46.2
CAN.G500.91 Capsicum annuum HOM05D005269 ORTHO05D006429 1.1e-14 83.2 127 45.7
Cc11_g00500 Coffea canephora HOM05D005269 ORTHO05D006429 5.8e-13 77.4 64 68.8
Dinv17239 Davidia involucrata HOM05D005269 ORTHO05D006429 5.8e-13 77.4 130 38.5
MSTRG.4345 Avicennia marina HOM05D005269 ORTHO05D006429 1.3e-12 76.3 123 43.1
Peaxi162Scf00536g00089 Petunia axillaris HOM05D005269 ORTHO05D006429 2.9e-12 75.1 124 46.0
HanXRQChr17g0540921 Helianthus annuus HOM05D005269 ORTHO05D006429 1.1e-11 73.2 63 60.3
TWI32G0228 Tripterygium wilfordii HOM05D005269 ORTHO05D006429 1.1e-11 73.2 63 68.3
Oeu034712.1 Olea europaea HOM05D005269 ORTHO05D006429 1.9e-11 72.4 130 39.2
DCAR_009029 Daucus carota HOM05D005269 ORTHO05D006429 4.1e-11 71.2 128 40.6
CAN.G17.24 Capsicum annuum HOM05D005269 ORTHO05D006429 7.1e-11 70.5 132 43.2
Actinidia33802 Actinidia chinensis HOM05D005269 ORTHO05D006429 1.6e-10 69.3 124 37.9
Lj7A504G56 Lonicera japonica HOM05D005269 ORTHO05D006429 2.7e-10 68.6 127 39.4
Ciclev10033086m.g Citrus clementina HOM05D005269 ORTHO05D006429 1.0e-09 66.6 72 55.6
RcHm_v2.0_Chr2g0117101 Rosa chinensis HOM05D005269 ORTHO05D006429 1.7e-09 65.9 131 39.7
PGR004G2648 Punica granatum HOM05D005269 ORTHO05D006429 2.3e-09 65.5 65 61.5
Thhalv10009118m.g Eutrema salsugineum HOM05D005269 ORTHO05D006429 3.9e-09 64.7 127 37.8
Manes.09G130300 Manihot esculenta HOM05D005269 ORTHO05D006429 5.1e-09 64.3 123 37.4
CiPaw.05G211300 Carya illinoinensis HOM05D005269 ORTHO05D006429 6.6e-09 63.9 128 36.7
Eucgr.I00374 Eucalyptus grandis HOM05D005269 ORTHO05D006429 6.6e-09 63.9 128 38.3
AL1G20410 Arabidopsis lyrata HOM05D005269 ORTHO05D006429 8.7e-09 63.5 129 38.8
MD07G1311000 Malus domestica HOM05D005269 ORTHO05D006429 1.9e-08 62.4 126 38.1
Ah.04g159550 Amaranthus hybridus HOM05D005269 ORTHO05D006429 2.5e-08 62.0 65 61.5
A06p06530 Brassica napus HOM05D005269 ORTHO05D006429 3.3e-08 61.6 127 36.2
Sp1g08440 Schrenkiella parvula HOM05D005269 ORTHO05D006429 3.3e-08 61.6 127 35.4
AT1G09815 Arabidopsis thaliana HOM05D005269 ORTHO05D006429 4.3e-08 61.2 127 36.2
BcaC05g24843 Brassica carinata HOM05D005269 ORTHO05D006429 4.3e-08 61.2 127 36.2
BolC5t29544H Brassica oleracea HOM05D005269 ORTHO05D006429 4.3e-08 61.2 127 36.2
FvH4_1g22780 Fragaria vesca HOM05D005269 ORTHO05D006429 4.3e-08 61.2 127 37.0
FAN19G2412 Fragaria x ananassa HOM05D005269 ORTHO05D006429 4.3e-08 61.2 127 37.0
AUR62000236 Chenopodium quinoa HOM05D005269 ORTHO05D006429 5.6e-08 60.8 130 42.3
Sabra19G0053500 Salix brachista HOM05D005269 ORTHO05D006429 5.6e-08 60.8 128 35.9
FAN26G3478 Fragaria x ananassa HOM05D005269 ORTHO05D006429 9.6e-08 60.1 127 36.2
Potri.019G042900 Populus trichocarpa HOM05D005269 ORTHO05D006429 9.6e-08 60.1 129 38.0
Aa31LG1G5120 Aethionema arabicum HOM05D005269 ORTHO05D006429 1.2e-07 59.7 127 37.8
EL10Ac4g10063 Beta vulgaris HOM05D005269 ORTHO05D006429 1.2e-07 59.7 65 58.5
Eucgr.L00611 Eucalyptus grandis HOM05D005269 ORTHO05D006429 1.2e-07 59.7 64 54.7
Rhsim09G0214100 Rhododendron simsii HOM05D005269 ORTHO05D006429 1.2e-07 59.7 59 59.3
THA.LOC104820303 Tarenaya hassleriana HOM05D005269 ORTHO05D006429 1.6e-07 59.3 127 36.2
CARHR009820 Cardamine hirsuta HOM05D005269 ORTHO05D006429 2.1e-07 58.9 127 35.4
Cpa.g.sc43.150 Carica papaya HOM05D005269 ORTHO05D006429 2.1e-07 58.9 61 55.7
CsaV3_5G005690 Cucumis sativus L. HOM05D005269 ORTHO05D006429 2.1e-07 58.9 62 53.2
Gohir.A13G001000 Gossypium hirsutum HOM05D005269 ORTHO05D006429 2.1e-07 58.9 129 38.0
Duzib128G1401 Durio zibethinus HOM05D005269 ORTHO05D006429 3.6e-07 58.2 64 59.4
Hma1.2p1_0419F.1_g149570 Hydrangea macrophylla HOM05D005269 ORTHO05D006429 3.6e-07 58.2 122 34.4
Gorai.007G246800 Gossypium raimondii HOM05D005269 ORTHO05D006429 6.2e-07 57.4 126 35.7
Lsat_1_v5_gn_9_46181 Lactuca sativa HOM05D005269 ORTHO05D006429 6.2e-07 57.4 63 49.2
PSO063G4725 Papaver somniferum HOM05D005269 ORTHO05D006429 6.2e-07 57.4 66 50.0
PSO782G4777 Papaver somniferum HOM05D005269 ORTHO05D006429 6.2e-07 57.4 66 50.0
Sed0009591 Sechium edule HOM05D005269 ORTHO05D006429 6.2e-07 57.4 62 48.4
Carub.0001s0919 Capsella rubella HOM05D005269 ORTHO05D006429 8.1e-07 57.0 61 59.0
MELO3C005384.2 Cucumis melo HOM05D005269 ORTHO05D006429 8.1e-07 57.0 62 51.6
Prupe.2G330200 Prunus persica HOM05D005269 ORTHO05D006429 8.1e-07 57.0 71 53.5
Thecc.05G226400 Theobroma cacao HOM05D005269 ORTHO05D006429 8.1e-07 57.0 122 37.7
BraA06t23864Z Brassica rapa HOM05D005269 ORTHO05D006429 1.1e-06 56.6 63 55.6
ECA232G2798 Erigeron canadensis HOM05D005251 ORTHO05D006680 1.4e-06 56.2 59 52.5
Gohir.A11G225900 Gossypium hirsutum HOM05D005269 ORTHO05D006429 1.4e-06 56.2 126 34.9
Gohir.D11G234500 Gossypium hirsutum HOM05D005269 ORTHO05D006429 1.8e-06 55.8 126 34.9
AUR62006583 Chenopodium quinoa HOM05D005269 ORTHO05D006429 2.4e-06 55.5 130 40.0
Sabra13G0065600 Salix brachista HOM05D005269 ORTHO05D006429 4.0e-06 54.7 125 34.4
Actinidia04559 Actinidia chinensis HOM05D005269 ORTHO05D006429 5.2e-06 54.3 60 50.0
Haze_00354 Corylus avellana HOM05D005269 ORTHO05D006429 5.2e-06 54.3 64 48.4
Thecc.05G226600 Theobroma cacao HOM05D005269 ORTHO05D006429 5.2e-06 54.3 128 37.5
ClCG01G005450 Citrullus lanatus HOM05D005269 ORTHO05D006429 6.9e-06 53.9 62 43.5


User provided reference genes

Program Settings