Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002279g0130 Nicotiana tabacum HOM05D022246 ORTHO05D008111 1.7e-43 179.5 129 100.0
Nitab4.5_0002848g0060 Nicotiana tabacum HOM05D006966 ORTHO05D008111 1.7e-24 116.3 117 62.4
Nitab4.5_0003163g0020 Nicotiana tabacum HOM05D000846 ORTHO05D008111 7.8e-17 90.9 89 61.8
Nitab4.5_0005347g0030 Nicotiana tabacum HOM05D022246 ORTHO05D008111 1.9e-15 86.3 80 75.0
Solyc01g098570.2 Solanum lycopersicum HOM05D006966 ORTHO05D008111 1.9e-15 86.3 100 55.0
PGSC0003DMG400028568 Solanum tuberosum HOM05D006966 ORTHO05D008111 1.5e-12 76.6 100 58.0
CAN.G1134.3 Capsicum annuum HOM05D006966 ORTHO05D008111 4.4e-12 75.1 100 68.0
Nitab4.5_0003288g0040 Nicotiana tabacum HOM05D022246 ORTHO05D008111 6.4e-11 71.2 156 58.3
Nitab4.5_0002229g0240 Nicotiana tabacum HOM05D022246 ORTHO05D008111 2.4e-10 69.3 51 80.4
Nitab4.5_0002814g0150 Nicotiana tabacum HOM05D022246 ORTHO05D008111 3.2e-10 68.9 50 70.0
Peaxi162Scf00434g00052 Petunia axillaris HOM05D006966 ORTHO05D008111 4.1e-10 68.6 41 82.9
Hma1.2p1_0666F.1_g199360 Hydrangea macrophylla HOM05D006966 ORTHO05D008111 2.7e-09 65.9 105 50.5
FvH4_6g05230 Fragaria vesca HOM05D006966 ORTHO05D008111 3.5e-09 65.5 104 43.3
FAN09G4667 Fragaria x ananassa HOM05D006966 ORTHO05D008111 4.6e-09 65.1 100 42.0
Cpa.g.sc48.3 Carica papaya HOM05D006966 ORTHO05D008111 6.0e-09 64.7 61 59.0
Dinv40245 Davidia involucrata HOM05D000556 ORTHO05D008111 7.8e-09 64.3 101 48.5
FAN14G0100 Fragaria x ananassa HOM05D006966 ORTHO05D008111 1.0e-08 63.9 104 42.3
FAN14G4059 Fragaria x ananassa HOM05D006966 ORTHO05D008111 1.0e-08 63.9 104 42.3
Peaxi162Scf00071g00710 Petunia axillaris HOM05D006966 ORTHO05D008111 1.0e-08 63.9 41 73.2
FAN05G0025 Fragaria x ananassa HOM05D006966 ORTHO05D008111 3.0e-08 62.4 103 42.7
FAN05G1324 Fragaria x ananassa HOM05D006966 ORTHO05D008111 3.0e-08 62.4 103 42.7
FAN05G1352 Fragaria x ananassa HOM05D006966 ORTHO05D008111 3.0e-08 62.4 103 42.7
Dinv22908 Davidia involucrata HOM05D006966 ORTHO05D008111 3.9e-08 62.0 41 73.2
VMungo0540G1150 Vigna mungo HOM05D006966 ORTHO05D008111 5.0e-08 61.6 105 49.5
Atru.chr2.499 Acer truncatum HOM05D006966 ORTHO05D008111 6.6e-08 61.2 41 68.3
FAN02G1750 Fragaria x ananassa HOM05D006966 ORTHO05D008111 1.1e-07 60.5 66 54.5
QL03p004162 Quercus lobata HOM05D006966 ORTHO05D008111 1.5e-07 60.1 39 74.4
Nn3g21196 Nelumbo nucifera HOM05D006966 ORTHO05D008111 1.9e-07 59.7 61 52.5
Potri.005G037600 Populus trichocarpa HOM05D006966 ORTHO05D008111 2.5e-07 59.3 41 70.7
RcHm_v2.0_Chr3g0453941 Rosa chinensis HOM05D006966 ORTHO05D008111 3.3e-07 58.9 62 56.5
Cc02_g32560 Coffea canephora HOM05D006966 ORTHO05D008111 4.3e-07 58.5 100 44.0
MELO3C004314.2 Cucumis melo HOM05D006966 ORTHO05D008111 4.3e-07 58.5 41 73.2
CsaV3_2G004840 Cucumis sativus L. HOM05D006966 ORTHO05D008111 4.3e-07 58.5 41 73.2
Potri.013G027100 Populus trichocarpa HOM05D006966 ORTHO05D008111 7.3e-07 57.8 41 68.3
Prupe.6G331500 Prunus persica HOM05D006966 ORTHO05D008111 7.3e-07 57.8 40 70.0
Ca_09380_v3 Cicer arietinum L. HOM05D006966 ORTHO05D008111 9.5e-07 57.4 41 70.7
ClCG02G016130 Citrullus lanatus HOM05D006966 ORTHO05D008111 9.5e-07 57.4 41 70.7
Sabra05G0038600 Salix brachista HOM05D006966 ORTHO05D008111 1.6e-06 56.6 41 68.3
TAR633G0886 Trochodendron aralioides HOM05D006966 ORTHO05D008111 1.6e-06 56.6 106 53.8
Eucgr.H04442 Eucalyptus grandis HOM05D006966 ORTHO05D008111 2.1e-06 56.2 41 68.3
Lj9P680T20 Lonicera japonica HOM05D006966 ORTHO05D008111 2.1e-06 56.2 103 37.9
TWI36G1607 Tripterygium wilfordii HOM05D006966 ORTHO05D008111 2.1e-06 56.2 39 64.1
Gohir.A08G212500 Gossypium hirsutum HOM05D006966 ORTHO05D008111 4.7e-06 55.1 99 36.4
CANSAT54G0218 Cannabis sativa HOM05D006966 ORTHO05D008111 8.1e-06 54.3 41 61.0
Gorai.004G243700 Gossypium raimondii HOM05D006966 ORTHO05D008111 8.1e-06 54.3 99 36.4
MD04G1210600 Malus domestica HOM05D006966 ORTHO05D008111 8.1e-06 54.3 40 67.5
Psat3g009600 Pisum sativum HOM05D006966 ORTHO05D008111 8.1e-06 54.3 41 65.9


User provided reference genes

Program Settings