Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002276g0010 Nicotiana tabacum HOM05D005449 ORTHO05D006916 1.6e-68 262.7 139 100.0
Sopen08g023260 Solanum pennellii HOM05D005449 ORTHO05D006916 6.5e-62 240.7 138 92.0
Solyc08g074670.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 1.1e-61 240.0 138 91.3
PGSC0003DMG400018921 Solanum tuberosum HOM05D005449 ORTHO05D006916 7.2e-61 237.3 138 90.6
Peaxi162Scf00445g00079 Petunia axillaris HOM05D005449 ORTHO05D006916 8.0e-60 233.8 138 89.9
CAN.G857.16 Capsicum annuum HOM05D005449 ORTHO05D006916 4.4e-58 228.0 138 87.7
Nitab4.5_0008438g0020 Nicotiana tabacum HOM05D005449 ORTHO05D006916 1.5e-53 213.0 138 81.9
Peaxi162Scf00045g01343 Petunia axillaris HOM05D005449 ORTHO05D006916 3.3e-53 211.8 138 81.2
Solyc08g005920.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 5.2e-51 204.5 138 78.3
PGSC0003DMG400004469 Solanum tuberosum HOM05D005449 ORTHO05D006916 5.2e-51 204.5 138 79.0
Sopen08g001890 Solanum pennellii HOM05D005449 ORTHO05D006916 2.0e-50 202.6 138 76.8
Nitab4.5_0000860g0030 Nicotiana tabacum HOM05D005449 ORTHO05D006916 5.7e-50 201.1 138 79.0
CSS0004919 Camellia sinensis var. sinensis HOM05D005449 ORTHO05D006916 3.5e-47 191.8 139 77.0
Cfa005902 Carpinus fangiana HOM05D005449 ORTHO05D006916 3.5e-47 191.8 139 77.0
QL12p028306 Quercus lobata HOM05D005449 ORTHO05D006916 1.3e-46 189.9 139 76.3
CANSAT25G1565 Cannabis sativa HOM05D005449 ORTHO05D006916 1.7e-46 189.5 139 75.5
Dinv33060 Davidia involucrata HOM05D005449 ORTHO05D006916 1.7e-46 189.5 139 75.5
DCAR_002842 Daucus carota HOM05D005449 ORTHO05D006916 5.0e-46 188.0 138 73.2
Hma1.2p1_1986F.1_g310070 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 6.6e-46 187.6 139 75.5
Hma1.2p1_2044F.1_g312372 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 6.6e-46 187.6 139 75.5
MD05G1096300 Malus domestica HOM05D005449 ORTHO05D006916 6.6e-46 187.6 139 74.1
Prupe.8G140700 Prunus persica HOM05D005449 ORTHO05D006916 1.9e-45 186.0 140 74.3
FAN20G1025 Fragaria x ananassa HOM05D005449 ORTHO05D006916 7.3e-45 184.1 138 73.9
Cc01_g20940 Coffea canephora HOM05D005449 ORTHO05D006916 1.6e-44 183.0 138 73.2
Nn3g21512 Nelumbo nucifera HOM05D005449 ORTHO05D006916 2.8e-44 182.2 138 73.9
FvH4_2g03920 Fragaria vesca HOM05D005449 ORTHO05D006916 8.0e-44 180.6 138 73.2
RcHm_v2.0_Chr6g0252971 Rosa chinensis HOM05D005449 ORTHO05D006916 8.0e-44 180.6 138 73.2
Rhsim06G0059700 Rhododendron simsii HOM05D005449 ORTHO05D006916 1.0e-43 180.3 133 75.2
RcHm_v2.0_Chr6g0252941 Rosa chinensis HOM05D005449 ORTHO05D006916 1.0e-43 180.3 138 73.9
CsaV3_4G000480 Cucumis sativus L. HOM05D005449 ORTHO05D006916 1.8e-43 179.5 139 71.2
Lj4g0006553 Lotus japonicus HOM05D005449 ORTHO05D006916 1.8e-43 179.5 141 69.5
MELO3C017987.2 Cucumis melo HOM05D005449 ORTHO05D006916 2.3e-43 179.1 140 72.1
FAN27G2298 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.3e-43 179.1 138 71.7
FAN15G2928 Fragaria x ananassa HOM05D005449 ORTHO05D006916 3.1e-43 178.7 138 71.7
Dinv44016 Davidia involucrata HOM05D005449 ORTHO05D006916 5.2e-43 177.9 140 73.6
Migut.D00146 Erythranthe guttata HOM05D005449 ORTHO05D006916 5.2e-43 177.9 138 73.2
TAR636G0282 Trochodendron aralioides HOM05D005449 ORTHO05D006916 5.2e-43 177.9 139 72.7
Glyma.05G185600 Glycine max HOM05D005449 ORTHO05D006916 6.8e-43 177.6 139 71.2
PSO675G2222 Papaver somniferum HOM05D005449 ORTHO05D006916 8.9e-43 177.2 138 71.0
Aqoxy1G00207 Aquilegia oxysepala HOM05D005449 ORTHO05D006916 1.2e-42 176.8 138 70.3
CiPaw.08G094600 Carya illinoinensis HOM05D005449 ORTHO05D006916 1.2e-42 176.8 139 70.5
Sed0024679 Sechium edule HOM05D005449 ORTHO05D006916 1.2e-42 176.8 139 71.2
Ca_17681_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 1.5e-42 176.4 141 68.8
Ca_29605_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 1.5e-42 176.4 141 68.8
Potri.014G127900 Populus trichocarpa HOM05D005449 ORTHO05D006916 2.0e-42 176.0 148 68.2
HanXRQChr06g0163691 Helianthus annuus HOM05D005449 ORTHO05D006916 2.6e-42 175.6 124 76.6
Medtr8g092180 Medicago truncatula HOM05D005449 ORTHO05D006916 3.4e-42 175.3 134 72.4
vmacro09952 Vaccinium macrocarpon HOM05D005449 ORTHO05D006916 4.4e-42 174.9 163 63.8
Gohir.D12G133700 Gossypium hirsutum HOM05D005449 ORTHO05D006916 7.5e-42 174.1 140 70.7
Gorai.008G144700 Gossypium raimondii HOM05D005449 ORTHO05D006916 7.5e-42 174.1 140 70.7
Eucgr.F02473 Eucalyptus grandis HOM05D005449 ORTHO05D006916 9.8e-42 173.7 139 69.8
SGA_v2.0_scaffold1G00359 Striga asiatica HOM05D005449 ORTHO05D006916 9.8e-42 173.7 138 71.0
Gohir.A12G129900 Gossypium hirsutum HOM05D005449 ORTHO05D006916 1.3e-41 173.3 140 70.7
TWI14G0435 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 1.3e-41 173.3 130 74.6
CiPaw.07G110200 Carya illinoinensis HOM05D005449 ORTHO05D006916 2.2e-41 172.6 139 71.2
Thecc.01G301700 Theobroma cacao HOM05D005449 ORTHO05D006916 2.9e-41 172.2 129 73.6
Ciclev10022754m.g Citrus clementina HOM05D005449 ORTHO05D006916 3.7e-41 171.8 141 70.9
MSTRG.21637 Avicennia marina HOM05D005449 ORTHO05D006916 4.9e-41 171.4 140 71.4
Duzib138G1099 Durio zibethinus HOM05D005449 ORTHO05D006916 4.9e-41 171.4 139 69.8
Lsat_1_v5_gn_8_164201 Lactuca sativa HOM05D005449 ORTHO05D006916 6.4e-41 171.0 136 72.8
Manes.05G061600 Manihot esculenta HOM05D005449 ORTHO05D006916 6.4e-41 171.0 143 69.2
Sabra14G0095000 Salix brachista HOM05D005449 ORTHO05D006916 6.4e-41 171.0 113 80.5
MBI18_g24865_MAGBIO Magnolia biondii HOM05D005449 ORTHO05D006916 8.3e-41 170.6 142 69.7
CDE05G2918 Ceratophyllum demersum HOM05D005449 ORTHO05D006916 1.1e-40 170.2 141 68.8
Phvul.002G266700 Phaseolus vulgaris HOM05D005449 ORTHO05D006916 1.4e-40 169.9 138 68.8
PGR119G1363 Punica granatum HOM05D005449 ORTHO05D006916 1.4e-40 169.9 132 72.7
Oeu054120.1 Olea europaea HOM05D005449 ORTHO05D006916 1.9e-40 169.5 138 68.8
THA.LOC104817488 Tarenaya hassleriana HOM05D005449 ORTHO05D006916 3.2e-40 168.7 116 76.7
Cpa.g.sc9.253 Carica papaya HOM05D005449 ORTHO05D006916 4.1e-40 168.3 132 71.2
ECA236G0849 Erigeron canadensis HOM05D005449 ORTHO05D006916 4.1e-40 168.3 138 68.8
Oeu024404.1 Olea europaea HOM05D005449 ORTHO05D006916 4.1e-40 168.3 138 69.6
Duzib211G0575 Durio zibethinus HOM05D005449 ORTHO05D006916 5.4e-40 167.9 138 68.1
GSVIVG01028030001 Vitis vinifera HOM05D005449 ORTHO05D006916 7.0e-40 167.5 108 82.4
COL.COLO4_23333 Corchorus olitorius HOM05D005449 ORTHO05D006916 9.2e-40 167.2 139 69.8
Actinidia21206 Actinidia chinensis HOM05D005449 ORTHO05D006916 2.7e-39 165.6 134 70.9
ClCG10G010560 Citrullus lanatus HOM05D005449 ORTHO05D006916 2.7e-39 165.6 151 65.6
Hund11156 Selenicereus undatus HOM05D005449 ORTHO05D006916 3.5e-39 165.2 155 63.2
TWI59G1340 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 3.5e-39 165.2 139 68.3
EL10Ac7g17526 Beta vulgaris HOM05D005449 ORTHO05D006916 4.6e-39 164.9 139 66.2
Glyma.08G143600 Glycine max HOM05D005449 ORTHO05D006916 7.8e-39 164.1 139 66.2
unitig_26.g10174 Utricularia gibba HOM05D005449 ORTHO05D006916 7.8e-39 164.1 124 70.2
Ah.08g213380 Amaranthus hybridus HOM05D005449 ORTHO05D006916 2.3e-38 162.5 128 66.4
FAN22G2041 Fragaria x ananassa HOM05D005449 ORTHO05D006916 3.0e-38 162.2 122 70.5
RcHm_v2.0_Chr4g0408421 Rosa chinensis HOM05D005449 ORTHO05D006916 3.9e-38 161.8 124 70.2
FvH4_4g11510 Fragaria vesca HOM05D005449 ORTHO05D006916 5.0e-38 161.4 122 69.7
FAN07G2516 Fragaria x ananassa HOM05D005449 ORTHO05D006916 6.6e-38 161.0 122 69.7
TPR.G2165 Trifolium pratense HOM05D005449 ORTHO05D006916 1.1e-37 160.2 142 64.8
Os05g0154900 Oryza sativa ssp. japonica HOM05D005449 ORTHO05D006916 2.5e-37 159.1 144 66.0
Rhsim09G0186400 Rhododendron simsii HOM05D005449 ORTHO05D006916 2.5e-37 159.1 165 60.6
Lalb_Chr03g0036381 Lupinus albus HOM05D005449 ORTHO05D006916 5.6e-37 157.9 113 74.3
arahy.Tifrunner.gnm1.ann1.X8E93Z Arachis hypogaea HOM05D005449 ORTHO05D006916 2.8e-36 155.6 142 63.4
arahy.Tifrunner.gnm1.ann1.YB8ZH2 Arachis hypogaea HOM05D005449 ORTHO05D006916 2.8e-36 155.6 142 63.4
Psat7g049640 Pisum sativum HOM05D005449 ORTHO05D006916 6.2e-36 154.5 134 65.7
VMungo0251G2862 Vigna mungo HOM05D000587 ORTHO05D000929 2.3e-35 152.5 139 62.6
ATR0582G023 Amborella trichopoda HOM05D005449 ORTHO05D006916 1.2e-34 150.2 139 62.6
Sc04g0009560 Simmondsia chinensis HOM05D005449 ORTHO05D006916 1.2e-34 150.2 142 60.6
AL5G33630 Arabidopsis lyrata HOM05D005449 ORTHO05D006916 5.8e-34 147.9 115 70.4
Zm00001eb346090 Zea mays HOM05D005449 ORTHO05D006916 3.2e-32 142.1 116 66.4
Lsat_1_v5_gn_7_53001 Lactuca sativa HOM05D005449 ORTHO05D006916 8.6e-30 134.0 116 70.7
HPP92_010681 Vanilla planifolia HOM05D005449 ORTHO05D006916 1.9e-29 132.9 124 61.3
RcHm_v2.0_Chr6g0264541 Rosa chinensis HOM05D005449 ORTHO05D006916 2.5e-29 132.5 104 73.1
AUR62008679 Chenopodium quinoa HOM05D005449 ORTHO05D006916 9.5e-29 130.6 149 54.4
AT3G52860 Arabidopsis thaliana HOM05D005449 ORTHO05D006916 1.2e-26 123.6 121 62.0
Atru.chr5.1135 Acer truncatum HOM05D005449 ORTHO05D006916 1.5e-26 123.2 98 70.4
MD10G1102600 Malus domestica HOM05D005449 ORTHO05D006916 1.5e-26 123.2 82 75.6
SMO367G0046 Selaginella moellendorffii HOM05D005449 ORTHO05D006916 2.0e-26 122.9 118 57.6
Haze_04950 Corylus avellana HOM05D005449 ORTHO05D006916 5.8e-26 121.3 80 78.8
Pp3c14_5880 Physcomitrium patens HOM05D005449 ORTHO05D006916 5.8e-26 121.3 114 57.0
BcaB01g00336 Brassica carinata HOM05D005449 ORTHO05D006916 1.3e-25 120.2 115 60.9
Carub.0005s1933 Capsella rubella HOM05D005449 ORTHO05D006916 1.7e-25 119.8 115 60.0
Thhalv10010784m.g Eutrema salsugineum HOM05D005449 ORTHO05D006916 1.7e-25 119.8 118 62.7
Sp5g09480 Schrenkiella parvula HOM05D005449 ORTHO05D006916 2.2e-25 119.4 119 61.3
A09p45940 Brassica napus HOM05D005449 ORTHO05D006916 4.9e-25 118.2 115 60.0
BolC8t50425H Brassica oleracea HOM05D005449 ORTHO05D006916 4.9e-25 118.2 115 60.0
C08p28130 Brassica napus HOM05D005449 ORTHO05D006916 8.4e-25 117.5 115 59.1
BraA09t40054Z Brassica rapa HOM05D005449 ORTHO05D006916 8.4e-25 117.5 115 59.1
CARHR162730 Cardamine hirsuta HOM05D005449 ORTHO05D006916 8.4e-25 117.5 151 51.7
AUR62025565 Chenopodium quinoa HOM05D005449 ORTHO05D006916 3.2e-24 115.5 147 50.3
SEGI_14448 Sequoiadendron giganteum HOM05D005449 ORTHO05D006916 3.2e-24 115.5 128 52.3
HanXRQChr06g0163731 Helianthus annuus HOM05D005449 ORTHO05D006916 4.1e-24 115.2 84 76.2
Ciclev10033890m.g Citrus clementina HOM05D005449 ORTHO05D006916 7.1e-24 114.4 147 49.0
HanXRQChr10g0316901 Helianthus annuus HOM05D005449 ORTHO05D006916 3.5e-23 112.1 107 63.6
FvH4_7g29690 Fragaria vesca HOM05D005449 ORTHO05D006916 7.8e-23 110.9 76 77.6
PSO675G2923 Papaver somniferum HOM05D005449 ORTHO05D006916 3.9e-22 108.6 88 64.8
AagrBONN_evm.TU.Sc2ySwM_117.989 Anthoceros agrestis HOM05D005449 ORTHO05D006916 2.5e-21 105.9 115 53.0
Actinidia07783 Actinidia chinensis HOM05D005449 ORTHO05D006916 2.1e-20 102.8 70 77.1
Atru.chr11.2437 Acer truncatum HOM05D005449 ORTHO05D006916 2.8e-20 102.4 163 42.9
Mapoly0162s0020 Marchantia polymorpha HOM05D005449 ORTHO05D006916 2.6e-18 95.9 100 51.0
Zm00001eb340530 Zea mays HOM05D005449 ORTHO05D006916 3.6e-12 75.5 91 50.5
Manes.01G220201 Manihot esculenta HOM05D005449 ORTHO05D006916 9.0e-11 70.9 83 51.8
BcaC07g39651 Brassica carinata HOM05D001272 ORTHO05D001843 1.3e-09 67.0 82 48.8
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 4.2e-08 62.0 70 52.9
Zm00001eb085090 Zea mays HOM05D005449 ORTHO05D006916 1.2e-07 60.5 38 76.3
FAN17G0623 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.0e-06 57.4 42 73.8


User provided reference genes

Program Settings