Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.9e-311 1071.6 552 100.0
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 9.6e-290 999.6 553 93.7
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 3.4e-247 858.2 551 82.0
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 2.2e-246 855.5 552 82.2
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 4.0e-227 791.6 549 78.9
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 8.9e-179 630.9 472 69.9
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 2.9e-177 625.9 504 64.3
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 6.0e-175 618.2 502 64.3
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 3.8e-169 599.0 437 70.7
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 6.4e-169 598.2 523 62.1
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 8.4e-169 597.8 497 64.2
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 3.5e-167 592.4 537 60.5
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 3.1e-163 579.3 446 67.0
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 4.0e-163 578.9 497 62.0
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 9.9e-162 574.3 492 61.6
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 1.1e-160 570.9 537 60.0
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 2.4e-160 569.7 529 59.0
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 1.7e-158 563.5 488 62.7
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 3.0e-158 562.8 484 60.3
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 3.0e-158 562.8 507 60.6
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 6.2e-156 555.1 539 57.3
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 1.4e-155 553.9 537 58.1
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 3.4e-154 549.3 512 59.2
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 3.4e-154 549.3 512 58.4
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 2.2e-153 546.6 476 62.2
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 4.9e-153 545.4 480 61.7
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 4.2e-152 542.3 532 56.4
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 5.5e-152 542.0 440 63.4
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 7.1e-152 541.6 471 61.6
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 1.2e-151 540.8 512 59.0
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 1.8e-150 537.0 395 70.1
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 3.3e-149 532.7 523 56.8
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 9.6e-149 531.2 476 60.1
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.8e-148 529.6 478 60.0
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 4.8e-148 528.9 509 56.0
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 3.8e-145 519.2 444 63.1
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 6.5e-145 518.5 491 58.0
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 1.9e-144 516.9 531 55.4
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 1.6e-143 513.8 495 57.0
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 1.6e-143 513.8 537 55.3
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 1.6e-143 513.8 487 57.3
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 3.5e-143 512.7 477 58.3
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 3.0e-142 509.6 495 56.4
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 1.1e-141 507.7 504 56.0
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 2.1e-140 503.4 544 54.0
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 2.4e-139 500.0 461 57.3
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 6.5e-137 491.9 526 52.7
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 3.9e-134 482.6 486 54.3
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 5.7e-133 478.8 476 56.3
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 2.2e-132 476.9 457 56.2
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 8.2e-132 474.9 512 53.7
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 8.2e-132 474.9 474 55.9
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 8.2e-132 474.9 524 50.8
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 1.4e-131 474.2 498 54.4
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 2.6e-130 469.9 479 54.5
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 7.7e-130 468.4 479 53.7
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 1.3e-129 467.6 453 57.0
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 3.6e-127 459.5 497 51.5
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 3.0e-126 456.4 475 53.5
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 3.0e-126 456.4 491 53.2
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 3.3e-125 453.0 533 50.5
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 4.3e-125 452.6 419 55.8
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 5.7e-125 452.2 496 52.4
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 4.1e-123 446.0 482 52.7
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 1.5e-122 444.1 494 52.6
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 2.0e-122 443.7 485 49.1
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 3.4e-122 443.0 478 52.9
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 2.5e-120 436.8 498 51.4
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 9.4e-120 434.9 517 50.5
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 1.6e-119 434.1 476 52.9
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 3.6e-119 433.0 497 50.5
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 7.9e-119 431.8 489 47.2
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 1.0e-118 431.4 476 52.9
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 2.3e-118 430.3 476 52.7
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 8.8e-118 428.3 434 55.1
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 9.1e-115 418.3 498 50.0
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 5.0e-113 412.5 434 53.9
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 6.5e-113 412.1 508 49.2
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 5.5e-112 409.1 433 51.7
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 2.1e-111 407.1 491 49.3
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 2.3e-110 403.7 361 60.7
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 2.0e-109 400.6 377 57.0
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 2.2e-108 397.1 596 40.8
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 4.0e-102 376.3 354 57.3
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 8.8e-102 375.2 460 47.4
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 3.8e-97 359.8 424 47.6
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 2.6e-93 347.1 373 53.9
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 5.7e-93 345.9 452 46.5
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 1.7e-92 344.4 357 57.1
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 1.6e-82 311.2 380 46.6
PGSC0003DMG402021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 1.6e-79 301.2 209 77.5
PGSC0003DMG401021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 4.7e-79 299.7 166 94.6
MBI10_g02216_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 1.3e-76 291.6 197 74.6
Carub.0007s2301 Capsella rubella HOM05D006050 ORTHO05D007457 1.8e-70 271.2 193 70.5
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 4.9e-68 263.1 364 42.6
Lalb_Chr18g0055531 Lupinus albus HOM05D006050 ORTHO05D007457 1.7e-65 254.6 190 68.9
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 3.1e-62 243.8 290 46.6
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 2.9e-60 237.3 308 44.5
MBI10_g02215_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 3.8e-60 236.9 304 46.1
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 1.1e-59 235.3 348 41.4
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 2.3e-57 227.6 317 41.3
BcaNung05669 Brassica carinata HOM05D006050 ORTHO05D007457 3.9e-57 226.9 166 69.3
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 4.3e-56 223.4 352 42.0
unitig_32.g11518 Utricularia gibba HOM05D006050 ORTHO05D007457 2.6e-53 214.2 243 48.1
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 3.5e-50 203.8 213 50.2
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 5.4e-43 179.9 201 51.7
SEGI_20862 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 4.6e-42 176.8 123 71.5
Carub.0007s2300 Capsella rubella HOM05D006050 ORTHO05D007457 6.0e-42 176.4 261 42.5
Cpa.g.sc166.18 Carica papaya HOM05D006050 ORTHO05D007457 3.0e-41 174.1 133 67.7
CARHR225070 Cardamine hirsuta HOM05D006050 ORTHO05D007457 3.9e-41 173.7 264 41.3
Zm00001eb120180 Zea mays HOM05D006050 ORTHO05D007457 3.9e-41 173.7 281 39.5
FAN11G0378 Fragaria x ananassa HOM05D006050 ORTHO05D007457 1.3e-39 168.7 144 61.1
Gohir.D10G040800 Gossypium hirsutum HOM05D006050 ORTHO05D007457 1.6e-39 168.3 222 41.4
Gohir.A10G040000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.1e-39 167.9 222 41.4
MCO07G478 Micromonas commoda HOM05D006050 ORTHO05D007457 1.1e-38 165.6 395 34.4
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 2.4e-38 164.5 180 52.2
AUR62030212 Chenopodium quinoa HOM05D006050 ORTHO05D007457 1.3e-31 142.1 144 52.8
Pp3c6_19460 Physcomitrium patens HOM05D006050 ORTHO05D007457 1.0e-28 132.5 206 39.3
PSO063G2775 Papaver somniferum HOM05D006050 ORTHO05D007457 2.7e-26 124.4 104 64.4
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 9.7e-24 115.9 122 54.9
Mapoly0042s0029 Marchantia polymorpha HOM05D006050 ORTHO05D007457 3.4e-21 107.5 165 40.0
CSS0043541 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 7.6e-21 106.3 66 81.8
DCAR_011844 Daucus carota HOM05D006050 ORTHO05D007457 1.7e-20 105.1 87 63.2
COL.COLO4_31088 Corchorus olitorius HOM05D006050 ORTHO05D007457 2.7e-18 97.8 61 77.0
unitig_32.g11513 Utricularia gibba HOM05D057528 ORTHO05D030710 9.7e-16 89.4 77 50.6
CSS0030855 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.4e-14 85.5 46 84.8
CSS0036908 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.4e-14 85.5 46 84.8
CSS0038270 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.4e-14 85.5 72 51.4
vmacro04187 Vaccinium macrocarpon HOM05D006050 ORTHO05D030710 1.5e-13 82.0 125 38.4
PGSC0003DMG403021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 1.9e-11 75.1 59 67.8
Cpa.g.sc166.16 Carica papaya HOM05D006050 ORTHO05D007457 1.1e-08 65.9 127 36.2


User provided reference genes

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