Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 6.2e-79 297.4 147 100.0
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.7e-68 262.7 155 85.2
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 1.1e-59 233.4 152 77.6
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 1.4e-59 233.0 152 77.6
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 5.3e-54 214.5 157 72.6
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 2.0e-53 212.6 159 71.1
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 7.7e-21 104.4 109 48.6
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 1.0e-20 104.0 109 48.6
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 2.5e-19 99.4 121 47.1
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 1.2e-18 97.1 145 40.7
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 1.6e-18 96.7 144 41.7
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 2.1e-18 96.3 135 43.7
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 4.7e-18 95.1 121 43.0
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 4.7e-18 95.1 151 41.7
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 4.0e-17 92.0 113 46.0
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 4.0e-17 92.0 142 42.3
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 6.8e-17 91.3 138 39.1
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 2.6e-16 89.4 77 57.1
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 3.4e-16 89.0 62 64.5
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 4.4e-16 88.6 105 43.8
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 4.4e-16 88.6 105 43.8
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 4.4e-16 88.6 78 57.7
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 5.7e-16 88.2 77 58.4
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 5.7e-16 88.2 85 50.6
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 5.7e-16 88.2 58 63.8
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 1.3e-15 87.0 70 57.1
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 1.7e-15 86.7 47 76.6
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 1.7e-15 86.7 49 73.5
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 2.8e-15 85.9 103 41.7
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 2.8e-15 85.9 103 41.7
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 3.7e-15 85.5 83 55.4
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 3.7e-15 85.5 103 41.7
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 3.7e-15 85.5 49 69.4
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.1e-14 84.0 108 46.3
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 1.1e-14 84.0 71 50.7
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 1.4e-14 83.6 108 41.7
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.4e-14 83.6 108 46.3
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 1.4e-14 83.6 108 46.3
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.4e-14 83.6 82 50.0
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 1.4e-14 83.6 124 41.9
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.8e-14 83.2 111 44.1
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 1.8e-14 83.2 108 41.7
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 4.1e-14 82.0 65 55.4
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 5.4e-14 81.6 75 60.0
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 7.0e-14 81.3 107 39.3
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 7.0e-14 81.3 70 51.4
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 9.2e-14 80.9 43 79.1
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 1.6e-13 80.1 75 49.3
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 2.0e-13 79.7 85 47.1
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 2.0e-13 79.7 69 55.1
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 2.0e-13 79.7 77 51.9
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 2.7e-13 79.3 142 38.0
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 2.7e-13 79.3 92 51.1
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 5.9e-13 78.2 87 50.6
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 5.9e-13 78.2 83 45.8
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 5.9e-13 78.2 105 41.9
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.0e-12 77.4 70 45.7
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 1.0e-12 77.4 149 36.2
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 1.0e-12 77.4 62 54.8
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 1.0e-12 77.4 131 38.2
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 1.3e-12 77.0 78 51.3
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 1.3e-12 77.0 71 56.3
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 2.3e-12 76.3 47 63.8
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 2.3e-12 76.3 47 63.8
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 2.9e-12 75.9 117 40.2
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 2.9e-12 75.9 47 63.8
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 3.8e-12 75.5 41 70.7
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 8.6e-12 74.3 68 54.4
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 1.5e-11 73.6 133 35.3
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 1.5e-11 73.6 34 82.4
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 1.5e-11 73.6 133 39.1
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 1.9e-11 73.2 71 47.9
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 1.9e-11 73.2 45 71.1
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 1.9e-11 73.2 36 75.0
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 2.5e-11 72.8 33 84.8
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 2.5e-11 72.8 102 43.1
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 2.5e-11 72.8 35 80.0
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 3.3e-11 72.4 35 80.0
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 3.3e-11 72.4 136 39.0
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 7.3e-11 71.2 94 44.7
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 7.3e-11 71.2 94 38.3
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 9.5e-11 70.9 41 73.2
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 9.5e-11 70.9 64 50.0
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 1.2e-10 70.5 32 81.2
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 1.6e-10 70.1 96 44.8
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 1.6e-10 70.1 42 69.0
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 3.6e-10 68.9 31 80.6
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 8.0e-10 67.8 29 86.2
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 1.0e-09 67.4 94 40.4
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 2.3e-09 66.2 34 70.6
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 2.3e-09 66.2 81 43.2
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 4.0e-09 65.5 55 47.3
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 5.2e-09 65.1 39 69.2
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 6.8e-09 64.7 29 82.8
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 6.8e-09 64.7 31 77.4
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 2.6e-08 62.8 91 38.5
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 2.6e-08 62.8 49 55.1
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 5.8e-08 61.6 120 33.3
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 7.5e-08 61.2 94 38.3
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 7.5e-08 61.2 94 38.3
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 1.3e-07 60.5 29 72.4
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 1.7e-07 60.1 33 66.7
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.7e-07 60.1 55 49.1
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 1.1e-06 57.4 63 42.9


User provided reference genes

Program Settings