Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 3.2e-110 402.1 262 100.0
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 6.9e-105 384.4 262 80.5
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 9.4e-62 241.1 262 62.6
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 8.0e-61 238.0 262 61.5
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 4.7e-45 185.7 206 55.8
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 1.5e-43 180.6 262 59.2
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 9.8e-35 151.4 239 47.3
Nitab4.5_0002265g0110 Nicotiana tabacum HOM05D005549 ORTHO05D006771 2.3e-31 140.2 238 43.3
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 7.8e-24 115.2 261 33.0
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 2.3e-23 113.6 274 34.3
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 2.3e-23 113.6 187 40.1
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 3.9e-23 112.8 188 39.4
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 3.9e-23 112.8 258 50.4
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 3.9e-23 112.8 262 47.7
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 5.1e-23 112.5 262 32.8
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 1.1e-22 111.3 261 41.8
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 1.9e-22 110.5 259 48.6
Solyc11g070183.1 Solanum lycopersicum HOM05D007214 ORTHO05D008907 1.9e-22 110.5 118 60.2
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 2.5e-22 110.2 262 34.0
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 4.3e-22 109.4 261 36.8
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 4.3e-22 109.4 270 45.2
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 4.3e-22 109.4 262 44.3
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 1.2e-21 107.8 259 31.7
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 1.6e-21 107.5 264 45.5
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 4.7e-21 105.9 262 32.4
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 6.2e-21 105.5 263 32.7
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 1.1e-20 104.8 259 32.0
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 8.9e-20 101.7 264 43.6
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 2.0e-19 100.5 261 43.7
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 2.6e-19 100.1 264 32.6
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 3.4e-19 99.8 189 35.4
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 5.8e-19 99.0 261 32.2
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 1.3e-18 97.8 263 41.1
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 2.2e-18 97.1 260 31.2
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 2.9e-18 96.7 261 45.2
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 6.4e-18 95.5 268 36.6
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 2.4e-17 93.6 261 45.2
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 3.2e-17 93.2 261 30.3
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 1.6e-16 90.9 191 54.5
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 1.6e-16 90.9 259 46.7
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 2.7e-16 90.1 265 34.3
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 2.7e-16 90.1 265 34.3
Dinv35004 Davidia involucrata HOM05D007214 ORTHO05D008907 3.5e-16 89.7 166 60.8
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 4.6e-16 89.4 256 31.2
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 7.8e-16 88.6 268 28.4
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 7.8e-16 88.6 190 57.9
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 1.7e-15 87.4 262 38.9
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 2.3e-15 87.0 158 36.7
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 3.0e-15 86.7 188 33.5
PGSC0003DMG400001300 Solanum tuberosum HOM05D007214 ORTHO05D008907 3.9e-15 86.3 216 41.2
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 1.5e-14 84.3 203 36.9
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 1.9e-14 84.0 262 38.9
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 1.9e-14 84.0 192 44.3
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 3.3e-14 83.2 261 41.0
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 3.3e-14 83.2 145 38.6
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 3.3e-14 83.2 183 33.3
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 5.6e-14 82.4 127 57.5
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 7.3e-14 82.0 267 29.2
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 9.6e-14 81.6 199 52.3
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 2.8e-13 80.1 211 49.8
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 2.8e-13 80.1 263 30.0
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 1.4e-12 77.8 262 37.4
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 1.4e-12 77.8 262 37.4
Lsat_1_v5_gn_4_180400 Lactuca sativa HOM05D007214 ORTHO05D008907 1.8e-12 77.4 191 50.3
Thecc.04G070100 Theobroma cacao HOM05D007214 ORTHO05D008907 1.8e-12 77.4 190 52.1
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 6.9e-12 75.5 261 42.1
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 6.9e-12 75.5 260 34.2
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 9.0e-12 75.1 190 28.9
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 1.2e-11 74.7 262 34.4
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 2.0e-11 73.9 61 62.3
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 3.4e-11 73.2 123 35.8
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 4.4e-11 72.8 196 30.1
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 7.6e-11 72.0 263 35.0
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 7.6e-11 72.0 61 60.7
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 9.9e-11 71.6 60 63.3
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 9.9e-11 71.6 275 40.0
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 2.2e-10 70.5 259 37.5
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 2.9e-10 70.1 261 42.9
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 2.9e-10 70.1 257 35.8
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 2.9e-10 70.1 61 63.9
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 4.9e-10 69.3 153 34.6
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 4.9e-10 69.3 261 37.2
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 4.9e-10 69.3 268 27.6
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 8.4e-10 68.6 267 34.8
ECA232G1410 Erigeron canadensis HOM05D007214 ORTHO05D008907 1.1e-09 68.2 196 48.5
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 1.1e-09 68.2 259 42.1
GSVIVG01032574001 Vitis vinifera HOM05D007214 ORTHO05D008907 1.4e-09 67.8 46 76.1
MSTRG.23970 Avicennia marina HOM05D007214 ORTHO05D008907 1.9e-09 67.4 46 76.1
unitig_746.g26578 Utricularia gibba HOM05D007214 ORTHO05D008907 3.2e-09 66.6 52 67.3
Oeu060589.1 Olea europaea HOM05D007214 ORTHO05D008907 5.4e-09 65.9 40 85.0
Thhalv10004882m.g Eutrema salsugineum HOM05D007214 ORTHO05D008907 1.3e-07 61.2 261 42.1
Sed0019253 Sechium edule HOM05D007214 ORTHO05D008907 5.6e-06 55.8 197 42.1


User provided reference genes

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