Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 1.5e-99 366.3 196 100.0
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 7.5e-88 327.4 200 90.0
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 8.6e-68 260.8 201 77.6
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 2.4e-62 242.7 199 74.4
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 7.1e-62 241.1 199 73.9
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 1.5e-59 233.4 200 73.0
CAN.G206.83 Capsicum annuum HOM05D007804 ORTHO05D009828 2.9e-55 219.2 209 67.9
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 6.5e-23 111.7 165 49.1
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 1.3e-18 97.4 173 43.4
Rhsim08G0063700 Rhododendron simsii HOM05D007804 ORTHO05D009828 2.8e-18 96.3 163 45.4
MSTRG.23968 Avicennia marina HOM05D007804 ORTHO05D009828 1.1e-17 94.4 157 44.6
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 1.1e-17 94.4 163 42.3
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 3.1e-17 92.8 168 41.7
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 9.0e-17 91.3 180 41.1
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 1.2e-16 90.9 190 42.6
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 3.4e-16 89.4 158 41.1
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 5.9e-16 88.6 174 40.2
ECA232G1800 Erigeron canadensis HOM05D007804 ORTHO05D009828 1.0e-15 87.8 159 40.9
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 1.3e-15 87.4 162 39.5
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 1.7e-15 87.0 155 42.6
SalBow1G7839 Salvia bowleyana HOM05D007804 ORTHO05D009828 1.7e-15 87.0 159 44.0
Migut.H00872 Erythranthe guttata HOM05D007804 ORTHO05D009828 5.0e-15 85.5 169 45.6
Oeu017303.1 Olea europaea HOM05D007804 ORTHO05D009828 8.5e-15 84.7 165 43.6
Oeu027756.1 Olea europaea HOM05D007804 ORTHO05D009828 1.4e-14 84.0 179 39.1
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 3.2e-14 82.8 173 36.4
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 4.2e-14 82.4 193 36.3
unitig_899.g15501 Utricularia gibba HOM05D007804 ORTHO05D009828 4.2e-14 82.4 156 42.9
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 1.2e-13 80.9 148 43.2
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 2.7e-13 79.7 158 38.6
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 4.6e-13 79.0 145 40.7
Hma1.2p1_0375F.1_g138910 Hydrangea macrophylla HOM05D007804 ORTHO05D009828 4.6e-13 79.0 160 38.1
Lsat_1_v5_gn_4_180340 Lactuca sativa HOM05D007804 ORTHO05D009828 6.1e-13 78.6 162 39.5
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 1.0e-12 77.8 169 37.3
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 1.0e-12 77.8 159 35.8
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 2.3e-12 76.6 175 36.6
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 8.8e-12 74.7 174 36.8
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 2.0e-11 73.6 161 37.3
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 7.4e-11 71.6 161 36.6
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 9.7e-11 71.2 161 36.6
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 9.7e-11 71.2 155 40.0
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 1.3e-10 70.9 172 36.0
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 1.3e-10 70.9 166 34.3
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 1.3e-10 70.9 171 33.9
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 1.7e-10 70.5 154 38.3
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 1.7e-10 70.5 161 36.0
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.7e-10 70.5 161 36.0
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 2.4e-09 66.6 169 36.1
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 2.4e-09 66.6 164 35.4
Sed0002452 Sechium edule HOM05D007804 ORTHO05D009828 2.4e-09 66.6 174 32.8
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 3.1e-09 66.2 177 36.2
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 3.1e-09 66.2 171 35.7
Aa31LG2G4650 Aethionema arabicum HOM05D007804 ORTHO05D009828 5.3e-09 65.5 175 33.1
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 5.3e-09 65.5 154 35.7
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 5.3e-09 65.5 176 34.7
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 2.6e-08 63.2 159 37.7
Lalb_Chr21g0319161 Lupinus albus HOM05D007804 ORTHO05D009828 3.4e-08 62.8 160 35.6
TWI36G0430 Tripterygium wilfordii HOM05D007804 ORTHO05D009828 7.7e-08 61.6 141 36.2
BcaC06g30917 Brassica carinata HOM05D007804 ORTHO05D009828 1.0e-07 61.2 170 37.6
THA.LOC104805425 Tarenaya hassleriana HOM05D007804 ORTHO05D009828 1.0e-07 61.2 192 31.2
BcaB07g30130 Brassica carinata HOM05D007804 ORTHO05D009828 2.2e-07 60.1 173 35.3
Psat1g077160 Pisum sativum HOM05D007804 ORTHO05D009828 2.2e-07 60.1 195 32.3
BcaC03g17515 Brassica carinata HOM05D007804 ORTHO05D009828 2.9e-07 59.7 175 35.4
C02p54770 Brassica napus HOM05D007804 ORTHO05D009828 2.9e-07 59.7 175 35.4
BolC2t11538H Brassica oleracea HOM05D007804 ORTHO05D009828 2.9e-07 59.7 175 35.4
CARHR292560 Cardamine hirsuta HOM05D007804 ORTHO05D009828 3.8e-07 59.3 185 34.1
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 3.8e-07 59.3 164 33.5
BraA02t08592Z Brassica rapa HOM05D007804 ORTHO05D009828 5.0e-07 58.9 183 36.1
Sp2g17190 Schrenkiella parvula HOM05D007804 ORTHO05D009828 1.1e-06 57.8 184 33.7
AL5G18030 Arabidopsis lyrata HOM05D007804 ORTHO05D009828 1.4e-06 57.4 184 32.1
A02p35930 Brassica napus HOM05D007804 ORTHO05D009828 1.4e-06 57.4 177 34.5
A06p40550 Brassica napus HOM05D007804 ORTHO05D009828 1.9e-06 57.0 182 33.0
Nn3g17058 Nelumbo nucifera HOM05D007804 ORTHO05D009828 3.2e-06 56.2 177 33.3
BraA06t26974Z Brassica rapa HOM05D007804 ORTHO05D009828 4.2e-06 55.8 182 33.0
Atru.chr8.2473 Acer truncatum HOM05D007804 ORTHO05D009828 7.2e-06 55.1 65 49.2
Carub.0005s0691 Capsella rubella HOM05D007804 ORTHO05D009828 9.4e-06 54.7 171 32.7


User provided reference genes

Program Settings