Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002263g0050 Nicotiana tabacum HOM05D007054 ORTHO05D008888 1.0e-99 366.7 177 100.0
Nitab4.5_0001401g0040 Nicotiana tabacum HOM05D007054 ORTHO05D008888 5.2e-64 248.1 254 56.3
Nitab4.5_0003726g0060 Nicotiana tabacum HOM05D007054 ORTHO05D008888 1.2e-55 220.3 243 53.5
Sopen01g050870 Solanum pennellii HOM05D007054 ORTHO05D008888 2.2e-54 216.1 248 51.2
Solyc01g108650.3 Solanum lycopersicum HOM05D007054 ORTHO05D008888 3.2e-53 212.2 248 50.4
PGSC0003DMG400025902 Solanum tuberosum HOM05D007054 ORTHO05D008888 1.2e-52 210.3 234 51.3
Peaxi162Scf00016g01532 Petunia axillaris HOM05D007054 ORTHO05D008888 3.8e-46 188.7 234 49.1
CAN.G322.40 Capsicum annuum HOM05D007054 ORTHO05D008888 7.1e-45 184.5 237 45.6
Nitab4.5_0000604g0160 Nicotiana tabacum HOM05D007054 ORTHO05D008888 9.9e-39 164.1 223 46.6
Dinv42118 Davidia involucrata HOM05D007054 ORTHO05D008888 2.1e-25 119.8 221 36.2
Haze_01879 Corylus avellana HOM05D007054 ORTHO05D008888 1.4e-24 117.1 219 34.7
CSS0047307 Camellia sinensis var. sinensis HOM05D007054 ORTHO05D008888 3.1e-24 115.9 204 36.3
Ciclev10029145m.g Citrus clementina HOM05D007054 ORTHO05D008888 2.0e-23 113.2 219 36.1
SalBow3G3466 Salvia bowleyana HOM05D007054 ORTHO05D008888 2.0e-23 113.2 232 33.2
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 4.5e-23 112.1 217 33.2
Duzib132G1179 Durio zibethinus HOM05D007054 ORTHO05D008888 3.8e-22 109.0 224 34.4
CiPaw.05G055500 Carya illinoinensis HOM05D007054 ORTHO05D008888 6.5e-22 108.2 227 34.4
Lj2g0019135 Lotus japonicus HOM05D007054 ORTHO05D008888 3.2e-21 105.9 230 31.3
MBI16_g08580_MAGBIO Magnolia biondii HOM05D007054 ORTHO05D008888 4.2e-21 105.5 214 35.0
Oeu021925.1 Olea europaea HOM05D007054 ORTHO05D008888 4.2e-21 105.5 187 34.8
Atru.chr5.2831 Acer truncatum HOM05D007054 ORTHO05D008888 9.3e-21 104.4 241 32.0
TAR381G0282 Trochodendron aralioides HOM05D007054 ORTHO05D008888 2.1e-20 103.2 238 31.9
Manes.15G143900 Manihot esculenta HOM05D007054 ORTHO05D008888 2.7e-20 102.8 214 32.2
Phvul.003G012100 Phaseolus vulgaris HOM05D007054 ORTHO05D008888 4.6e-20 102.1 206 33.0
Psat6g096080 Pisum sativum HOM05D007054 ORTHO05D008888 6.0e-20 101.7 209 32.1
Cfa005418 Carpinus fangiana HOM05D007054 ORTHO05D008888 7.9e-20 101.3 214 33.6
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 5.1e-19 98.6 63 71.4
SGA_v2.0_scaffold9G04688 Striga asiatica HOM05D007054 ORTHO05D008888 5.1e-19 98.6 68 63.2
Thecc.02G095100 Theobroma cacao HOM05D007054 ORTHO05D008888 5.1e-19 98.6 68 64.7
TAR625G1358 Trochodendron aralioides HOM05D007054 ORTHO05D008888 5.1e-19 98.6 73 64.4
Prupe.8G115700 Prunus persica HOM05D007054 ORTHO05D008888 6.7e-19 98.2 212 32.1
ECA234G0688 Erigeron canadensis HOM05D007054 ORTHO05D008888 8.7e-19 97.8 53 81.1
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 1.1e-18 97.4 62 72.6
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 1.1e-18 97.4 53 79.2
PGR142G2758 Punica granatum HOM05D007054 ORTHO05D008888 2.5e-18 96.3 176 36.9
MSTRG.5374 Avicennia marina HOM05D007054 ORTHO05D008888 4.3e-18 95.5 66 59.1
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 4.3e-18 95.5 62 67.7
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 4.3e-18 95.5 59 72.9
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 9.6e-18 94.4 62 71.0
TWI79G0983 Tripterygium wilfordii HOM05D007054 ORTHO05D008888 9.6e-18 94.4 231 29.9
arahy.Tifrunner.gnm1.ann1.M7JB84 Arachis hypogaea HOM05D007054 ORTHO05D008888 1.3e-17 94.0 54 70.4
Ca_12472_v3 Cicer arietinum L. HOM05D007054 ORTHO05D008888 1.3e-17 94.0 60 71.7
arahy.Tifrunner.gnm1.ann1.LAP5IF Arachis hypogaea HOM05D007054 ORTHO05D008888 1.6e-17 93.6 54 70.4
ClCG02G005650 Citrullus lanatus HOM05D007054 ORTHO05D008888 2.1e-17 93.2 52 75.0
FAN15G2151 Fragaria x ananassa HOM05D007054 ORTHO05D008888 2.1e-17 93.2 73 60.3
Glyma.20G009500 Glycine max HOM05D007054 ORTHO05D008888 2.1e-17 93.2 226 30.5
CANSAT25G2549 Cannabis sativa HOM05D007054 ORTHO05D008888 2.8e-17 92.8 58 67.2
Migut.N01207 Erythranthe guttata HOM05D007054 ORTHO05D008888 3.7e-17 92.4 60 65.0
Hma1.2p1_1543F.1_g289790 Hydrangea macrophylla HOM05D007054 ORTHO05D008888 3.7e-17 92.4 61 67.2
Lj9C361T14 Lonicera japonica HOM05D007054 ORTHO05D008888 8.2e-17 91.3 60 66.7
RcHm_v2.0_Chr6g0259351 Rosa chinensis HOM05D007054 ORTHO05D008888 8.2e-17 91.3 52 73.1
FvH4_2g06990 Fragaria vesca HOM05D007054 ORTHO05D008888 1.1e-16 90.9 146 35.6
Medtr1g034050 Medicago truncatula HOM05D007054 ORTHO05D008888 1.1e-16 90.9 206 29.6
Glyma.07G179400 Glycine max HOM05D007054 ORTHO05D008888 1.4e-16 90.5 50 76.0
Sabra04G0096600 Salix brachista HOM05D007054 ORTHO05D008888 1.4e-16 90.5 204 30.9
MELO3C018427.2 Cucumis melo HOM05D007054 ORTHO05D008888 1.8e-16 90.1 190 32.1
Potri.004G145600 Populus trichocarpa HOM05D007054 ORTHO05D008888 2.4e-16 89.7 205 30.7
MD00G1050600 Malus domestica HOM05D007054 ORTHO05D008888 3.1e-16 89.4 68 57.4
HanXRQChr12g0374541 Helianthus annuus HOM05D007054 ORTHO05D008888 5.3e-16 88.6 57 68.4
Lsat_1_v5_gn_5_117740 Lactuca sativa HOM05D007054 ORTHO05D008888 6.9e-16 88.2 57 68.4
THA.LOC104798802 Tarenaya hassleriana HOM05D007054 ORTHO05D008888 9.0e-16 87.8 52 71.2
Aa31LG10G4480 Aethionema arabicum HOM05D007054 ORTHO05D008888 1.5e-15 87.0 57 63.2
FvH4_2g07010 Fragaria vesca HOM05D007054 ORTHO05D008888 1.5e-15 87.0 52 71.2
Sc26g0004390 Simmondsia chinensis HOM05D007054 ORTHO05D008888 2.0e-15 86.7 66 59.1
Aqoxy2G00166 Aquilegia oxysepala HOM05D007054 ORTHO05D008888 3.4e-15 85.9 69 52.2
TPR.G11147 Trifolium pratense HOM05D007054 ORTHO05D008888 3.4e-15 85.9 189 31.7
AL1G56860 Arabidopsis lyrata HOM05D007054 ORTHO05D008888 1.0e-14 84.3 52 65.4
A05p20580 Brassica napus HOM05D007054 ORTHO05D008888 1.0e-14 84.3 52 65.4
BraA05t20968Z Brassica rapa HOM05D007054 ORTHO05D008888 1.0e-14 84.3 52 65.4
CsaV3_7G008860 Cucumis sativus L. HOM05D007054 ORTHO05D008888 1.7e-14 83.6 52 67.3
Lalb_Chr01g0013331 Lupinus albus HOM05D007054 ORTHO05D008888 1.7e-14 83.6 50 70.0
Aa31LG8G5880 Aethionema arabicum HOM05D007054 ORTHO05D008888 2.2e-14 83.2 53 62.3
BcaB02g11085 Brassica carinata HOM05D007054 ORTHO05D008888 3.8e-14 82.4 52 65.4
ATR0767G176 Amborella trichopoda HOM05D007054 ORTHO05D008888 5.0e-14 82.0 61 62.3
EL10Ac6g14668 Beta vulgaris HOM05D007054 ORTHO05D008888 5.0e-14 82.0 52 63.5
AUR62003054 Chenopodium quinoa HOM05D007054 ORTHO05D008888 8.4e-14 81.3 52 61.5
AUR62007867 Chenopodium quinoa HOM05D007054 ORTHO05D008888 8.4e-14 81.3 52 61.5
Thhalv10011746m.g Eutrema salsugineum HOM05D007054 ORTHO05D008888 8.4e-14 81.3 50 66.0
Ah.01g002690 Amaranthus hybridus HOM05D007054 ORTHO05D008888 1.4e-13 80.5 52 59.6
Aa31sc103G20 Aethionema arabicum HOM05D007054 ORTHO05D008888 2.5e-13 79.7 57 57.9
AT1G49510 Arabidopsis thaliana HOM05D007054 ORTHO05D008888 2.5e-13 79.7 52 61.5
BcaC05g27487 Brassica carinata HOM05D007054 ORTHO05D008888 3.2e-13 79.3 52 63.5
C05p34530 Brassica napus HOM05D007054 ORTHO05D008888 3.2e-13 79.3 52 63.5
Sp1g36370 Schrenkiella parvula HOM05D007054 ORTHO05D008888 4.2e-13 79.0 52 61.5
BolC5t32180H Brassica oleracea HOM05D007054 ORTHO05D008888 7.2e-13 78.2 52 63.5
Carub.0001s3870 Capsella rubella HOM05D007054 ORTHO05D008888 9.3e-13 77.8 52 59.6
PSO541G2621 Papaver somniferum HOM05D007054 ORTHO05D008888 1.6e-12 77.0 170 29.4
PSO675G3773 Papaver somniferum HOM05D007054 ORTHO05D008888 1.6e-12 77.0 170 29.4
Aa31LG1G22300 Aethionema arabicum HOM05D007054 ORTHO05D008888 2.7e-12 76.3 57 57.9
CARHR039530 Cardamine hirsuta HOM05D007054 ORTHO05D008888 4.6e-12 75.5 48 62.5
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 6.1e-12 75.1 62 54.8
CDE02G0602 Ceratophyllum demersum HOM05D007054 ORTHO05D008888 3.0e-11 72.8 44 70.5
Cc02_g18390 Coffea canephora HOM05D007054 ORTHO05D008888 9.7e-10 67.8 41 65.9
HPP92_001831 Vanilla planifolia HOM05D007054 ORTHO05D008888 8.2e-09 64.7 60 51.7
FAN27G0716 Fragaria x ananassa HOM05D007054 ORTHO05D008888 5.3e-08 62.0 33 72.7
Pp3c23_6910 Physcomitrium patens HOM05D007054 ORTHO05D008888 3.4e-07 59.3 68 39.7
AagrBONN_evm.TU.Sc2ySwM_344.1640 Anthoceros agrestis HOM05D007054 ORTHO05D008888 3.8e-06 55.8 68 39.7


User provided reference genes

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