Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 0.0e+00 1322.0 725 100.0
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 0.0e+00 1279.2 743 94.8
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 0.0e+00 1158.7 726 87.7
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 0.0e+00 1119.4 726 85.5
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 2.8e-305 1051.6 730 82.6
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 4.2e-277 958.0 727 75.2
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 1.3e-273 946.4 727 73.6
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 1.3e-267 926.4 727 71.4
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 6.9e-264 914.1 726 71.2
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 1.4e-261 906.4 727 70.3
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 4.6e-260 901.4 733 69.2
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 1.1e-258 896.7 755 68.3
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 9.7e-258 893.6 731 69.5
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 3.7e-257 891.7 733 69.0
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 4.8e-257 891.3 735 69.5
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 2.2e-254 882.5 727 68.8
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 3.6e-252 875.2 728 68.4
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 1.0e-251 873.6 735 66.7
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 8.8e-251 870.5 708 72.0
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 1.1e-250 870.2 814 62.8
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 4.8e-249 864.8 736 66.6
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 4.1e-248 861.7 728 67.7
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 7.0e-248 860.9 704 68.8
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 6.5e-246 854.4 729 67.1
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 8.5e-246 854.0 728 69.2
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 1.5e-245 853.2 702 68.8
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 2.0e-242 842.8 734 66.5
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 3.3e-242 842.0 726 67.4
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 3.3e-242 842.0 734 67.3
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 7.0e-240 834.3 728 65.9
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 7.0e-240 834.3 729 66.7
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 1.2e-239 833.6 725 65.8
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 2.0e-239 832.8 698 68.2
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.7e-238 829.7 732 65.0
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 5.5e-237 824.7 733 66.0
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 1.2e-236 823.5 731 64.6
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 4.7e-236 821.6 729 66.0
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 6.1e-236 821.2 724 64.9
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 6.1e-236 821.2 727 67.0
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 8.0e-236 820.8 729 64.9
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 1.4e-235 820.1 733 64.9
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 2.3e-235 819.3 733 64.9
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 6.8e-235 817.8 717 64.7
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 2.0e-234 816.2 731 64.2
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 2.6e-234 815.8 727 64.9
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 4.4e-234 815.1 675 68.9
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 9.8e-234 813.9 727 64.5
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 9.8e-234 813.9 735 63.3
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 1.3e-233 813.5 729 64.2
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 1.7e-233 813.1 730 64.4
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 3.7e-233 812.0 729 65.3
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 8.3e-233 810.8 731 63.6
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 9.1e-232 807.4 730 64.7
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 4.5e-231 805.1 728 63.9
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 5.9e-231 804.7 726 64.7
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 5.9e-231 804.7 816 59.7
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 2.3e-230 802.7 735 63.3
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 8.6e-230 800.8 734 63.5
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 8.6e-230 800.8 729 63.6
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 3.2e-229 798.9 726 64.9
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 9.5e-229 797.3 735 63.1
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 5.2e-227 791.6 726 63.8
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 1.2e-226 790.4 735 63.1
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 2.0e-226 789.6 730 63.6
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 5.7e-226 788.1 729 63.6
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 4.9e-225 785.0 722 64.0
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 5.4e-224 781.6 700 65.0
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 3.5e-223 778.9 745 61.6
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 2.9e-222 775.8 697 64.7
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 8.6e-222 774.2 730 62.1
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 4.7e-220 768.5 728 61.8
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 5.8e-218 761.5 730 61.8
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 5.8e-218 761.5 730 61.8
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 2.3e-214 749.6 697 63.7
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 5.0e-214 748.4 749 60.1
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 4.7e-212 741.9 795 57.2
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 1.5e-210 736.9 732 61.5
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 2.6e-210 736.1 729 59.8
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 6.6e-206 721.5 678 61.8
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 4.3e-205 718.8 727 58.0
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 2.1e-204 716.5 728 60.7
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 8.3e-201 704.5 701 59.8
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.4e-200 703.7 729 58.3
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 4.1e-200 702.2 732 58.9
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 2.1e-196 689.9 782 54.6
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 2.6e-194 682.9 678 61.4
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 8.4e-193 677.9 670 60.6
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 2.1e-183 646.7 742 52.6
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 4.0e-171 605.9 732 50.4
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 2.6e-162 576.6 367 86.9
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 3.2e-160 569.7 371 84.4
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 1.2e-159 567.8 597 59.1
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 1.6e-156 557.4 729 48.3
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 2.5e-152 543.5 580 56.2
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 3.7e-132 476.5 363 72.2
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 5.3e-131 472.6 552 54.0
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 3.0e-126 456.8 430 64.4
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 4.0e-126 456.4 424 63.4
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.1e-123 448.4 305 77.7
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 5.9e-122 442.6 586 50.5
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 9.1e-115 418.7 281 80.1
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 1.4e-91 341.7 763 35.4
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 1.0e-81 308.9 500 44.8
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.5e-80 305.1 350 56.3
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 5.6e-80 303.1 272 66.2
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 7.6e-77 292.7 727 32.3
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 6.4e-76 289.7 690 30.6
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 1.4e-75 288.5 370 50.5
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 7.1e-75 286.2 445 45.2
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 9.0e-70 269.2 724 30.4
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 1.1e-67 262.3 711 30.8
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 3.5e-66 257.3 659 35.4
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 4.8e-31 140.6 141 58.2
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.2e-26 125.9 84 71.4
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 1.4e-25 122.5 99 67.7
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.6e-24 118.2 140 50.7
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 1.7e-23 115.5 513 25.5
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 3.8e-20 104.4 124 50.0
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 4.2e-19 100.9 109 57.8
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 2.1e-18 98.6 177 43.5
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 3.3e-16 91.3 170 37.1
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 1.3e-15 89.4 93 57.0
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 6.3e-15 87.0 59 78.0
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 6.3e-15 87.0 107 49.5
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 2.4e-14 85.1 108 50.9
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 2.0e-13 82.0 118 39.8
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 7.7e-13 80.1 154 37.0
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 1.7e-12 79.0 69 63.8
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 5.5e-11 73.9 55 69.1
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 1.6e-10 72.4 54 70.4
MD15G1442500 Malus domestica HOM05D006009 ORTHO05D007389 2.4e-06 58.5 41 63.4
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 3.1e-06 58.2 40 72.5


User provided reference genes

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